AMCG00007677


Basic Information

Item Value
gene id AMCG00007677
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 25323088 ~ 25334806 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007677
GCTCTTGCAGCCTGTAGGTCTCTGACCAAAGTGCACCATGTCCTCTATCGCAGGAATTATTGCTGTACTATTTTCTTTCCATCTGAATATTTTGTCAGCGTCGACTTCAACACCTACACCAAGAGTGAAAAACGGTTAACCTCACAATTTCCAAGGAACCATGACAAGAACCAGTTAGGCATCTGCAATGATGCATTCAAAAGTGAAGGAATTGCTCCATTCTCTGTAAACGACAGCGTGCCATCACTGTTTGTTGGTGATGATCTTTACAGCACCGCAAATAGGTATTCTAATGGAAACAACGTAGGAATTCGCAGGTTTCGCGATAGAAAAGGAGATGTCTGGTCAGCTGTGCCGAAGACAGAGCAAAAGTATATCGGATTGGTCCTGAGCAAAAGACTAGAGGATGAGCTGCACGATAAAATCTACTCTTTCCTCCAAGAGAAGAACGGAGACCAACACCCTGAAGCAGATCCCTGGATCGCCCGCGTGACACAAGTTTGCAGAACCGATATGGGAGGCTCCAAAGTCATGTTGCAGAAACAGTGGACTTCAATTCTCAGTGCCAGGCTTACTTGTGGATTCCCAACTGAGAGACTTTATTTCAACCGACTTCTGGATATCTTTGTTTTACACGCCGATAACTGGAGAGAGAGCAAGGTCTATGGGCTCTTCTCTAGTCGCTGGAATTCGACAGCAGTGTGTATTTACAGCATGGAGGACATTGACAGAGTGTTCACAACATCCAAAATTAAAGGATATTCAGGGACTATCCCAACACCAAGGCCTGGAACGtgCGTCAGAGATAGTACAACGTTATCAAAGGAGGTGTTAGATATAATCAAAGACAACCCGGAGATGGAAGACTGGGTCAAGCCGATTGACAAGACTGCTCCTTTCATGGTCAGCCATAAGCATTATCGGAAGATTCAAGTGGACAGAGTCATGGGCCAGAACAACACATCACACACGGTCAATGGTAGGCCTTTCATCATTGAAGAAATCCAACCTTTTAAAGAGAAGACCCACATCCAGTCCATGATTTTGAATCCTACTACAAAAAAGCTTTATGTTGGCTCTGTTAATGAAGTGGTTCAGATTGACCTACAAAGCTGTAAGCATTATGGGAAAACGTGCCAGGATTGTGTTTTAGCACAAAATCCTTACTGTGGCTGGAATGGGAGTGAATGTACATCAGCAACAGATGTGCAGGAAGAATCTCTCTCCCCCAGTTACTACCTCTCCTGCCCTGTACTCTCTAATAATGCGCAATACTTCTGGCAGCACAAAGGAAGTACGATTGAATGCCAGTTAGTCAATGGGGAATGTGTGTACTTGATGAAGGAAAAGACTAAGGACAAGGCTGGTGAATACATCTGCAGAGCCCTGGAGAAGGGCTATGAAAAGCAAGTGGTACAATACTCAGTGAAGTTCACAAACCGTgccactgcactgcactccaGCTCCGCAGTCTTGGCAAGCATCCTTCCGTTCGCAGCCCTGTACTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007677 True 1509 mRNA 0.45 11 25323088 25334806

Neighbor

gene id symbol gene type direction distance location
AMCG00007667 pkm,kpyk coding downstream 316258 24989512 ~ 25006830 (-)
AMCG00007668 NA coding downstream 343751 24966872 ~ 24979337 (-)
AMCG00007666 NA coding downstream 377292 24934308 ~ 24945796 (-)
AMCG00007661 NA coding downstream 512621 24805791 ~ 24810467 (-)
AMCG00007662 cib1 coding downstream 520710 24799840 ~ 24802378 (-)
AMCG00007678 NA coding upstream 4556 25339362 ~ 25355884 (-)
AMCG00007679 NA coding upstream 24973 25359779 ~ 25362397 (-)
AMCG00007675 chrna5,LOC106587222,LOC108440259,LOC106562132 coding upstream 30231 25365037 ~ 25380395 (-)
AMCG00007676 LOC106587228 coding upstream 55383 25390189 ~ 25454403 (-)
AMCG00007683 LOC107739093,LOC107712505 coding upstream 318914 25653720 ~ 25658719 (-)
G25421 NA non-coding downstream 66727 25252716 ~ 25256361 (-)
G25415 LOC108275329,LOC103046663,LOC108436939,LOC105912564,LOC107696286,LOC103375935,LOC106584709,LOC104942717,LOC107753195 non-coding downstream 75709 25207774 ~ 25247379 (-)
G25387 NA non-coding downstream 334034 24988845 ~ 24989054 (-)
G25375 NA non-coding downstream 340949 24981934 ~ 24982139 (-)
G25248 NA non-coding downstream 780930 24498365 ~ 24542158 (-)
G25446 NA non-coding upstream 116957 25451763 ~ 25452022 (-)
G25615 NA non-coding upstream 1664500 26999306 ~ 26999546 (-)
G25617 NA non-coding upstream 1694165 27028971 ~ 27029294 (-)
G25620 NA non-coding upstream 1735080 27069886 ~ 27070099 (-)
G25655 NA non-coding upstream 1919423 27254229 ~ 27257033 (-)
G25422 NA other downstream 58137 25264332 ~ 25264951 (-)
AMCG00007637 NA other downstream 1041524 24262690 ~ 24281564 (-)
G25026 NA other downstream 1350423 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 1902785 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 2746634 22561496 ~ 22576454 (-)
AMCG00007684 shf,LOC108430988 other upstream 295986 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 718958 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 2022925 27357731 ~ 27370519 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 3559887 28894693 ~ 28921123 (-)
AMCG00007768 NA other upstream 3666243 29001049 ~ 29013947 (-)

Expression


Co-expression Network