AMCG00007678


Basic Information

Item Value
gene id AMCG00007678
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 25339362 ~ 25355884 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007678
GCATTATGAAGTCCTTTTCCTTTTGGGACACTTACTCTGCATTCTTCACAGTACCATTCCTTATCTGCTCAGTTCCCTGTATCCATGGTGGAAAGGTCTTGATTCCCCCAGTGGAGGGCAGCCATTGGGTGAACATGAACATCCTCATTGAAGCCATGCATGCCCGGGGCCACACCATCACAGTTCTCCGGCCAGAGAAAAGCTGGTACATTAAGAAAGAGTCTCCACATTACAGTACTGTCACAATCCCTCATGTTGAAACCATAGATGAacaattcataaaaaatatgatgATACTGCTAGAGATGGATAGAGGAAATTCATCCATGTGGAGCCTTTTCAGTTTACAGAAGGAAATGTTAAGTAAGTTTACTGAAGCTCACAAAAGGATTAGCGGAATGGCAAGCAGTATGTTAGAGGACCAGCAACTAATGAAGAGCCTCCAGGACACTCAGTATGACTTGGTCCTTACTGACCCAGTTTGGGGTTCCCTTGGTTTACAATGTGCGCTGGACTGTGGAAGGAGAAGGTCATTTTGCTATTGCCCCATCACCAATATCCTACATCCCAATAACAGGGAGGTCATCAATGAGCCGTCCTACCGGATCAACATGCAGAGGCTCTCCAGCCTGCACCGGGACCAGCCAATGAAACCACTAGACAGAGCGCTCTACTGGATAGAGTTCGTCATGAGACACAAAGGCGCTGCTCACTTGCGCACAGAGTCCTACAGGATGCCCTGGTACATCTACCACTCTGTGGATGTCATAGTGGTCTTACTGTTATCAAATTACTGTGCTGCAGGGTTTGCTccagaagaaaaAAGGCAACTGGTGAATATGTCAGCTAGTGCCTTCTACTGGAAAGAGTATGTCATGAGACACAAAGaTACCATGAAGACATATAATCTATCAAACACTCTCTCAACCTTTACTTTTGTACTCATTATCGTCACTTTGCATTCTTATGATTGTGGTAAGGTTCTGGTATTTCCAGTGGAAGGTAGCCATTGGGTGAATATGAAAATCTTGATAGAGGAACTGTATTCTAGGGGCCATAATATTACAGTGGTAAGATCATCAAATAGCCGATACATTAAGGAGAGCTCACCTCTCTACATGTCAATCACAATACCTGACAATGCAGAAATGGATGAAGACTTCTTTGACTTGTTCCTGAGCAGGTATCTTGAGGTccaaagaaaagagagaaacataTGGACTCTCCTAACAATGCAAAGGGATTTCTTTCAAATGCTTTCTGAAGCACATCGTGCATCATGTCAGATGGTGACtacaatgtttgaaaataaaccGTTGATGAAAAGTCTGGAGGACACTCATTATGACCTGGTACTAACAGATCCTGCCATAGCCGGTGGAGTTTTGTTGGCCCACTACCTTAAACTCCCCTTGGTTTTAAATGTTCGTTGGATCACCAGTGGGGAAGGTCATTTTGCCATTGCTCCTTCTCCAGTGTCTTACATCCCACTACCAGGATCAGGATTATCagacaaaattaattttatggaaaaaGAGGTCCTCAATGAGCCGTCCTACCGGATCAACATGCAGAGGCTCTCCAGCCTGCACCGGGACCAGCCAATGAAACCACTGGACAGGGCAATCTACTGGATAGAGTTCGTCATGAGACACAAAGGCGCTGCTCACCTGCGCACAGAGTCCTACAGGATGCCCTGGTACATCTACCACTCTGTGGATGTCATAGTTGCTGGTGGCCATTTTGGCTCCAAACTGTGCCGGACTGGATACCAGCTCCCAGACAAGCACTCCCAGataattGTGATGCCTCAT

Function

GO:

id name namespace
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007678 True 1814 mRNA 0.45 9 25339362 25355884

Neighbor

gene id symbol gene type direction distance location
AMCG00007677 NA coding downstream 4556 25323088 ~ 25334806 (-)
AMCG00007667 pkm,kpyk coding downstream 332532 24989512 ~ 25006830 (-)
AMCG00007668 NA coding downstream 360025 24966872 ~ 24979337 (-)
AMCG00007666 NA coding downstream 393566 24934308 ~ 24945796 (-)
AMCG00007661 NA coding downstream 528895 24805791 ~ 24810467 (-)
AMCG00007679 NA coding upstream 3895 25359779 ~ 25362397 (-)
AMCG00007675 chrna5,LOC106587222,LOC108440259,LOC106562132 coding upstream 9153 25365037 ~ 25380395 (-)
AMCG00007676 LOC106587228 coding upstream 34305 25390189 ~ 25454403 (-)
AMCG00007683 LOC107739093,LOC107712505 coding upstream 297836 25653720 ~ 25658719 (-)
AMCG00007689 NA coding upstream 316721 25672605 ~ 25681857 (-)
G25421 NA non-coding downstream 83001 25252716 ~ 25256361 (-)
G25415 LOC108275329,LOC103046663,LOC108436939,LOC105912564,LOC107696286,LOC103375935,LOC106584709,LOC104942717,LOC107753195 non-coding downstream 91983 25207774 ~ 25247379 (-)
G25387 NA non-coding downstream 350308 24988845 ~ 24989054 (-)
G25375 NA non-coding downstream 357223 24981934 ~ 24982139 (-)
G25248 NA non-coding downstream 797204 24498365 ~ 24542158 (-)
G25446 NA non-coding upstream 95879 25451763 ~ 25452022 (-)
G25615 NA non-coding upstream 1643422 26999306 ~ 26999546 (-)
G25617 NA non-coding upstream 1673087 27028971 ~ 27029294 (-)
G25620 NA non-coding upstream 1714002 27069886 ~ 27070099 (-)
G25655 NA non-coding upstream 1898345 27254229 ~ 27257033 (-)
G25422 NA other downstream 74411 25264332 ~ 25264951 (-)
AMCG00007637 NA other downstream 1057798 24262690 ~ 24281564 (-)
G25026 NA other downstream 1366697 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 1919059 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 2762908 22561496 ~ 22576454 (-)
AMCG00007684 shf,LOC108430988 other upstream 274908 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 697880 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 2001847 27357731 ~ 27370519 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 3538809 28894693 ~ 28921123 (-)
AMCG00007768 NA other upstream 3645165 29001049 ~ 29013947 (-)

Expression


Co-expression Network