AMCG00007679


Basic Information

Item Value
gene id AMCG00007679
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 25359779 ~ 25362397 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007679
GCTCGTCAAACAAATGCTGAGTTAGTTAAGACTTTCATAGCCTCAAAGTGCgtcttatttttcaaaaattcTTTAGAACCCATTGGACTGGAGCCTATCAGACATGCACGCATCTGCCAGATCTACCAAAAGATTCCTCGTTTTGCGACACTGTATGACAGAGAAAATCGCATTCCAGTGTACTCTGCATTCATATTCAGACCAGGAGCAGTACCTTGCCTGTTGCCTAGGAGCAAAGACTGGTATATTGAACCGCAAcTCACGTTTCATAACAGGCCCCCAGATATGATGCTACTGGAAGATCTTTACGATTCTGAAAAAAAGCCAAAGCCGAAGAGTGATTTTAGCCAACCCATTGTAGACAGCCAAGCCACGGACTGTGACTACTCTGCTTCTGGTTTTGATAAAGGACCTCTCAGTCTCAGCTGTTTCCACTTCGGGGACAGTCAAGAAGCAACTTTCACTTTGACCAATACAGTCCCCATGTACGAGAACTTTTACCGGATTGTATGGAAAAAAgcttatgaaaatgttttattgatggGACTTCTTGCAGTTTGCCATCCTCCTTACATCCCTTATGTCGTTACTGGTGCAGTGCCTTCTAACCGGTACGCACTCGGTCGGGTTAATGTGCCAGATTGGATCTGGTCAGCTGTTTGCTGTACTGGCAGAGGGTACAGTATTGCCTTTATTGGACAAAATGCCCCAAATGGGATGGTAAAAGTCCTATCCTTGAAGAAACTTGAAGAGAACCTTAAGATG

Function

GO: NA

KEGG:

id description
K15049 ENDOD1; endonuclease domain-containing 1 protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007679 True 765 mRNA 0.44 2 25359779 25362397

Neighbor

gene id symbol gene type direction distance location
AMCG00007678 NA coding downstream 3895 25339362 ~ 25355884 (-)
AMCG00007677 NA coding downstream 24973 25323088 ~ 25334806 (-)
AMCG00007667 pkm,kpyk coding downstream 352949 24989512 ~ 25006830 (-)
AMCG00007668 NA coding downstream 380442 24966872 ~ 24979337 (-)
AMCG00007666 NA coding downstream 413983 24934308 ~ 24945796 (-)
AMCG00007675 chrna5,LOC106587222,LOC108440259,LOC106562132 coding upstream 2640 25365037 ~ 25380395 (-)
AMCG00007676 LOC106587228 coding upstream 27792 25390189 ~ 25454403 (-)
AMCG00007683 LOC107739093,LOC107712505 coding upstream 291323 25653720 ~ 25658719 (-)
AMCG00007689 NA coding upstream 310208 25672605 ~ 25681857 (-)
AMCG00007688 NA coding upstream 500625 25863022 ~ 25895601 (-)
G25421 NA non-coding downstream 103418 25252716 ~ 25256361 (-)
G25415 LOC108275329,LOC103046663,LOC108436939,LOC105912564,LOC107696286,LOC103375935,LOC106584709,LOC104942717,LOC107753195 non-coding downstream 112400 25207774 ~ 25247379 (-)
G25387 NA non-coding downstream 370725 24988845 ~ 24989054 (-)
G25375 NA non-coding downstream 377640 24981934 ~ 24982139 (-)
G25248 NA non-coding downstream 817621 24498365 ~ 24542158 (-)
G25446 NA non-coding upstream 89366 25451763 ~ 25452022 (-)
G25615 NA non-coding upstream 1636909 26999306 ~ 26999546 (-)
G25617 NA non-coding upstream 1666574 27028971 ~ 27029294 (-)
G25620 NA non-coding upstream 1707489 27069886 ~ 27070099 (-)
G25655 NA non-coding upstream 1891832 27254229 ~ 27257033 (-)
G25422 NA other downstream 94828 25264332 ~ 25264951 (-)
AMCG00007637 NA other downstream 1078215 24262690 ~ 24281564 (-)
G25026 NA other downstream 1387114 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 1939476 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 2783325 22561496 ~ 22576454 (-)
AMCG00007684 shf,LOC108430988 other upstream 268395 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 691367 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 1995334 27357731 ~ 27370519 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 3532296 28894693 ~ 28921123 (-)
AMCG00007768 NA other upstream 3638652 29001049 ~ 29013947 (-)

Expression


Co-expression Network