AMCG00007681


Basic Information

Item Value
gene id AMCG00007681
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 25534509 ~ 25534985 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007681
ATGGCCAGATGGTTCAAGGAACACCTGGGATTCAAAACCACCAAAGCGCCCCCTCCCGCTCCCCCGAAGCCGGACTACAGGCACTGCCACCCGGCTGCGCCCAGCGCGCCCGGTTACCATCACCAGCAGCAGCCGCAGCAGCCGCAGCCCAGCGCCGGGGCCCCTGCCCACTACCCCAGCCCCGCGCAGCCGGACATCCTCGCAGCCTACAAGCTGCAGAAGGAGCGGGACTTCGAGGACCCGTATACGGGCAGCGGGGGCAGCTCCTTCCCAGGTGGTTTGAGCTGTGCCGGGTCGCCGGACATCAAATACGTCTCTCCCAAACACCGGCTGATCAAGGTGGAGACGGTGGAAAAAGGCAACTCAAGTCCCGGCAGTGGCAGCACTTCAGCCCCTGCAGTTTCCACGGGCAGCGTGAAGTCCCCCACGTCGCCGCCAGCCGACCAGGAGAACAAGCCGGACAAGGTGAGGCTTTAA

Function

GO:

id name namespace
GO:0090304 nucleic acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007681 True 477 mRNA 0.65 1 25534509 25534985

Neighbor

gene id symbol gene type direction distance location
AMCG00007680 LOC107661444,LOC108436947,LOC107696278 coding upstream 67273 25454680 ~ 25467236 (+)
AMCG00007674 LOC107097412,LOC102790211 coding upstream 219600 25304279 ~ 25314909 (+)
AMCG00007671 NA coding upstream 278148 25247801 ~ 25256361 (+)
AMCG00007672 LOC103046663,LOC107096723,LOC100697142,LOC101479677,LOC102219286 coding upstream 287160 25241954 ~ 25247349 (+)
AMCG00007673 NA coding upstream 301014 25232890 ~ 25233495 (+)
AMCG00007682 LOC102220226,LOC108442892 coding downstream 569 25535554 ~ 25673151 (+)
AMCG00007685 NA coding downstream 163238 25698223 ~ 25708138 (+)
AMCG00007686 loxl1 coding downstream 484829 26019814 ~ 26036364 (+)
AMCG00007691 ppcdc coding downstream 535774 26070759 ~ 26083421 (+)
AMCG00007690 LOC107583870,LOC107742881 coding downstream 561741 26096726 ~ 26115608 (+)
G25445 NA non-coding upstream 82716 25451533 ~ 25451793 (+)
G25405 NA non-coding upstream 213484 25315787 ~ 25321025 (+)
G25367 NA non-coding upstream 581181 24953125 ~ 24953328 (+)
G25302 NA non-coding upstream 592929 24934479 ~ 24941580 (+)
G25303 NA non-coding upstream 623138 24879365 ~ 24911371 (+)
G25531 NA non-coding downstream 518716 26053701 ~ 26061246 (+)
G25561 NA non-coding downstream 599376 26134361 ~ 26134577 (+)
G25562 NA non-coding downstream 601782 26136767 ~ 26142288 (+)
G25574 NA non-coding downstream 727842 26262827 ~ 26270720 (+)
G25588 NA non-coding downstream 778378 26313363 ~ 26313565 (+)
AMCG00007640 NA other upstream 1034859 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 1340028 24192221 ~ 24194481 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 1864430 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 2340988 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 2394988 23133811 ~ 23139521 (+)
G25822 NA other downstream 2548837 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 2903659 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 3147186 28682171 ~ 28700062 (+)
AMCG00007763 tbc1d2b other downstream 3365073 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 3468110 29003095 ~ 29006379 (+)

Expression


Co-expression Network