AMCG00007685


Basic Information

Item Value
gene id AMCG00007685
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 25698223 ~ 25708138 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007685
ATGAAACGAGAATCCGAGATAAAACTCTTGCCAGTGTCAAGCAAGGGCATTGCagCTGTCTTGGAGATGAAGGTCCCTGAAGTTCCAGTGGTGGCTTTGTTTGGAAAGGACGCAATCCTAAATTGCTCTTTTTCAACGGGCATGACCTTTAACCTCTCAGACCTGAGCGTGTTTTGGCAGCTGACTGACACCAAAAAGATAGTCCACAGCTTTTCAGCAGGGCAAGACCATCTTAGAGACCAGGGTGACACGTACATCAACCGCACCAGCCTGTTTCACAAGGAACTGGCTTCTGGGAATGCTTCTTTGCTACTCCGTGGGGTCAAGATTGCAGATGAAGGCAGCTTCACCTGCTTTGTCCGAATCAAGGAATACCGCAGCGAAGCATTGCAGCTGCAGGTAGCAGCCTCTTACTCAAAGCCCCACTTGGCCCTGAAACCAGAGTCCAACCTGAGAGCTGGGGATGTGGTGGCTCTGAACTGCCACTCCTATGGTGGCTATCCCATGGCCAACATCCTCTGGCAAGACGGAAGTGGAAGAAACTTAACAGACAACGTTACCACATCACAGGTGGCCAATGAACAAGGGCTGTTTAGTGTGCTGAGTGTCCTCACCGTGATGGTGGAGCCCAACAGCAACTACAGCTGCCTGGTCTGGAACGAAGTGTTGGACGAGGTGACCCATTCCTCCGTCACGATTACAGGTCAGTCCCTCCTGGTCCTACTCTACCAAGAAATGTTTCTCGTACAGTCCAGTCCATGCTGGGAAAAGTCAGTATTTACATCTGAGTTTGTGTGGTAG

Function

GO: NA

KEGG:

id description
K06746 B7H3, CD276; immune costimulatory protein B7-H3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007685 True 801 mRNA 0.51 3 25698223 25708138

Neighbor

gene id symbol gene type direction distance location
AMCG00007682 LOC102220226,LOC108442892 coding upstream 25072 25535554 ~ 25673151 (+)
AMCG00007681 NA coding upstream 163238 25534509 ~ 25534985 (+)
AMCG00007680 LOC107661444,LOC108436947,LOC107696278 coding upstream 230987 25454680 ~ 25467236 (+)
AMCG00007674 LOC107097412,LOC102790211 coding upstream 383314 25304279 ~ 25314909 (+)
AMCG00007671 NA coding upstream 441862 25247801 ~ 25256361 (+)
AMCG00007686 loxl1 coding downstream 311676 26019814 ~ 26036364 (+)
AMCG00007691 ppcdc coding downstream 362621 26070759 ~ 26083421 (+)
AMCG00007690 LOC107583870,LOC107742881 coding downstream 388588 26096726 ~ 26115608 (+)
AMCG00007692 NA coding downstream 409958 26118096 ~ 26131010 (+)
AMCG00007696 NA coding downstream 1451353 27159491 ~ 27179372 (+)
G25445 NA non-coding upstream 246430 25451533 ~ 25451793 (+)
G25405 NA non-coding upstream 377198 25315787 ~ 25321025 (+)
G25367 NA non-coding upstream 744895 24953125 ~ 24953328 (+)
G25302 NA non-coding upstream 756643 24934479 ~ 24941580 (+)
G25303 NA non-coding upstream 786852 24879365 ~ 24911371 (+)
G25531 NA non-coding downstream 345563 26053701 ~ 26061246 (+)
G25561 NA non-coding downstream 426223 26134361 ~ 26134577 (+)
G25562 NA non-coding downstream 428629 26136767 ~ 26142288 (+)
G25574 NA non-coding downstream 554689 26262827 ~ 26270720 (+)
G25588 NA non-coding downstream 605225 26313363 ~ 26313565 (+)
AMCG00007640 NA other upstream 1198573 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 1503742 24192221 ~ 24194481 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 2028144 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 2504702 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 2558702 23133811 ~ 23139521 (+)
G25822 NA other downstream 2375684 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 2730506 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 2974033 28682171 ~ 28700062 (+)
AMCG00007763 tbc1d2b other downstream 3191920 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 3294957 29003095 ~ 29006379 (+)

Expression


Co-expression Network