AMCG00007688


Basic Information

Item Value
gene id AMCG00007688
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 25863022 ~ 25895601 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007688
ATGTCCCTCAGCAGAGTGCAGGCCCGGGACAGCACTGAGACCCCCAGCCAGAGAGAGCGAATTCGCGGTCGCATGAAGATGGTGATTGACCAGCTAGAGGGGATTCTCAAAGAGCTGAAGGAGGTGGCAAGGGAACTCCGAGAGGTGGTGGGGCAGATTGACAAACTGACATCGGATTTTGATTTCGACCTCGAGCCTGATGACTGGACAGTAGCAACAGTGAGCAGCACATCCAGCAGCGAGAGAGGGCTTGGAGATGCTTTCGGACGCCTGGACTTCCTAAATCCAGATGTGCTCTCTGACAGCTGGGAGTTCTGCAACTTCTTGGAGACCCCTTCCCCGACTGCCACCGAGAAGCCAACGGAGGGGCTGGGGAGTTCAGAGCAGGCAGCCTATGCTCAAATGAACGGAGGCATCATCCCCAATGGGCCCATGGTCGTTACACCAGATTCCTCAAGCGAAGAGGCGGTCAGCTCCACACACAGTCACAAAAACTCCCGGTCATCTGGGACAAGGGAGCGAGTACGTTTCAGTGACAAAATCCTCTACCACGCTCTTTGCTGCgatgatgatgaggaggaagaggaggctgAAAGTGGCCCGACGccagagacagacagtgagcCCAGTCCACCTGCTGCCTCTCCAACACCCCCCTCCTCTGGACAGACTCTCCATAACTGTCTTGCCCCTTCCTCGCCTGGAGGAGGAGGGACAACAGCAGGAGCAACGACAACTGAGAAAAAAGCTGTTAACCCAGGCTGCCGGAAAAAACTGCTACGAAACAGCAGCACACAAACTGTCTCAGACAAAAGCACCCAAACAGTACTGCCCTATGTCCCtgccaaacagaaaacaaaggacCAGAACTGA

Function

GO: NA

KEGG:

id description
ko04911 Insulin secretion
ko04727 GABAergic synapse
ko05032 Morphine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007688 True 873 mRNA 0.55 2 25863022 25895601

Neighbor

gene id symbol gene type direction distance location
AMCG00007689 NA coding downstream 181165 25672605 ~ 25681857 (-)
AMCG00007683 LOC107739093,LOC107712505 coding downstream 204303 25653720 ~ 25658719 (-)
AMCG00007676 LOC106587228 coding downstream 408619 25390189 ~ 25454403 (-)
AMCG00007675 chrna5,LOC106587222,LOC108440259,LOC106562132 coding downstream 482627 25365037 ~ 25380395 (-)
AMCG00007679 NA coding downstream 500625 25359779 ~ 25362397 (-)
AMCG00007693 NA coding upstream 241051 26136652 ~ 26161514 (-)
AMCG00007694 hmg20a,LOC102798875 coding upstream 367387 26262988 ~ 26272450 (-)
AMCG00007695 LOC107560004,LOC107562294,LOC107727415,LOC107673268 coding upstream 583430 26479031 ~ 26480878 (-)
AMCG00007699 snx33 coding upstream 1304042 27199643 ~ 27212764 (-)
AMCG00007706 crabp1,crabp1a,LOC105895658 coding upstream 1397826 27293427 ~ 27307131 (-)
G25446 NA non-coding downstream 411000 25451763 ~ 25452022 (-)
G25421 NA non-coding downstream 606661 25252716 ~ 25256361 (-)
G25415 LOC108275329,LOC103046663,LOC108436939,LOC105912564,LOC107696286,LOC103375935,LOC106584709,LOC104942717,LOC107753195 non-coding downstream 615643 25207774 ~ 25247379 (-)
G25387 NA non-coding downstream 873968 24988845 ~ 24989054 (-)
G25375 NA non-coding downstream 880883 24981934 ~ 24982139 (-)
G25615 NA non-coding upstream 1103705 26999306 ~ 26999546 (-)
G25617 NA non-coding upstream 1133370 27028971 ~ 27029294 (-)
G25620 NA non-coding upstream 1174285 27069886 ~ 27070099 (-)
G25655 NA non-coding upstream 1358628 27254229 ~ 27257033 (-)
G25697 NA non-coding upstream 1458367 27353968 ~ 27355254 (-)
AMCG00007684 shf,LOC108430988 other downstream 231430 25630792 ~ 25631592 (-)
G25422 NA other downstream 598071 25264332 ~ 25264951 (-)
AMCG00007637 NA other downstream 1581458 24262690 ~ 24281564 (-)
G25026 NA other downstream 1890357 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 2442719 23406928 ~ 23420303 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 158163 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 1462130 27357731 ~ 27370519 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 2999092 28894693 ~ 28921123 (-)
AMCG00007768 NA other upstream 3105448 29001049 ~ 29013947 (-)
AMCG00007817 NA other upstream 5296409 31192010 ~ 31246649 (-)

Expression


Co-expression Network