AMCG00007689


Basic Information

Item Value
gene id AMCG00007689
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 25672605 ~ 25681857 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007689
ATGAAGGATGGACAGTGGTCAGCAGGCACCAACACCAGCCTAGGCTCCCACACCATGAAGCAGACCTGTGCAGGGCCCCAGGGTCCAAAGCAGGGGCCACACTTCCCCACATCACCCCCTGCACACTCTCTCAAAGTCCCGAGCGCTGACAAGCCGGGAGAGACGGTGACTTTCCGCACTCTGCTTTTGAACCGCTGCCAGAAGGAGTTTGAGACGGAGGATGATGGAGACGAGGGCGAGGAGCGGCAGCGTCTACGTGACGAGCTGCAGGAGGCCAAGCGCAAGGCCAAGCGCAAGGCCCAGCGGCGCTCGCTAGGCAACATCAGGTTCATTGGGGAGCTGTTCAAGGTGAAGATGCTGGTGAAGAAAACCATGCACAATTGCATCGTCAAGCTGTTGAAGAACCACGACGAGTCCCTGGAGTGCCTGTGCCGACTGCTCTCCACTATCGGCAAAGACCTGGACGTGGAGATCGCCAAGGTAAGGCAGGTCCGGCTGCCGTGCCAGATTGAGCCCTGGCTAAACATCCAGCAACGTGATGGGGCCTCTAGATAGTGGAAATATACCCCTGACGAGAAGGAGAGTGAGCGGCAGTTCCTGCTGGACTTACAGTTCATCTGTGACAGGTTGCAGAAACTCCGCATTAGCGATGTGGTCCTGGCTAAGgCCATAAATACCCCTGTGCATCGCCTGGACCCCAGTCAGCTGACAGGGATGAACTCTGTCCCTGACCTTACCCCCTCTCTTGCCAACCTTGGCATACAGCCCATGGGGGGACATGGCCCAGGCTCTTTGCCACCCCAGCCCTCAGCAGAGGGTGCCCGGTGTTCCCGGCAGGGCAAGAGGAAGGAGCCGCAAATCATCAATGTGTCATTCTCGCATGAGGTTCATCTCAACAAGGCCGAGAAGGCCTGGAAGCCTACAATTAAGCAGGCTCCCACAGTGGGTGATGACCCCGAGGTCATTAAGACCCAGCGCTCCCAGCAGGGCGAGAGGAGTGAGCAGCGCAAGGTCATCAACCTGTCATTCTCGCATGAGggtgaGGAGCGTCAGCGTCTACGTGACGAACTGCAGGAGGCCAAGCACAAGGCCCAGCGGCGCTCACTAGGCCACATGAAGTTCTTTGGGGAGTTGTTCAAGGTGAAGATGCTGACAGAGGCCANNNNNNNNNNCTGCATCTTCAAGCTGTTGAAGAACCACGATGAGTCCCTGGAGTGCCTGTGCCGACTCCTCTCCACTATCGGCAAAGACCTGGATCTCGAGACAGCCAAGGACGTCTTGGACCTGAGAAGAGTAAGTCATGAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007689 True 1308 mRNA 0.57 8 25672605 25681857

Neighbor

gene id symbol gene type direction distance location
AMCG00007683 LOC107739093,LOC107712505 coding downstream 13886 25653720 ~ 25658719 (-)
AMCG00007676 LOC106587228 coding downstream 218202 25390189 ~ 25454403 (-)
AMCG00007675 chrna5,LOC106587222,LOC108440259,LOC106562132 coding downstream 292210 25365037 ~ 25380395 (-)
AMCG00007679 NA coding downstream 310208 25359779 ~ 25362397 (-)
AMCG00007678 NA coding downstream 316721 25339362 ~ 25355884 (-)
AMCG00007688 NA coding upstream 181165 25863022 ~ 25895601 (-)
AMCG00007693 NA coding upstream 454795 26136652 ~ 26161514 (-)
AMCG00007694 hmg20a,LOC102798875 coding upstream 581131 26262988 ~ 26272450 (-)
AMCG00007695 LOC107560004,LOC107562294,LOC107727415,LOC107673268 coding upstream 797174 26479031 ~ 26480878 (-)
AMCG00007699 snx33 coding upstream 1517786 27199643 ~ 27212764 (-)
G25446 NA non-coding downstream 220583 25451763 ~ 25452022 (-)
G25421 NA non-coding downstream 416244 25252716 ~ 25256361 (-)
G25415 LOC108275329,LOC103046663,LOC108436939,LOC105912564,LOC107696286,LOC103375935,LOC106584709,LOC104942717,LOC107753195 non-coding downstream 425226 25207774 ~ 25247379 (-)
G25387 NA non-coding downstream 683551 24988845 ~ 24989054 (-)
G25375 NA non-coding downstream 690466 24981934 ~ 24982139 (-)
G25615 NA non-coding upstream 1317449 26999306 ~ 26999546 (-)
G25617 NA non-coding upstream 1347114 27028971 ~ 27029294 (-)
G25620 NA non-coding upstream 1388029 27069886 ~ 27070099 (-)
G25655 NA non-coding upstream 1572372 27254229 ~ 27257033 (-)
G25697 NA non-coding upstream 1672111 27353968 ~ 27355254 (-)
AMCG00007684 shf,LOC108430988 other downstream 41013 25630792 ~ 25631592 (-)
G25422 NA other downstream 407654 25264332 ~ 25264951 (-)
AMCG00007637 NA other downstream 1391041 24262690 ~ 24281564 (-)
G25026 NA other downstream 1699940 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 2252302 23406928 ~ 23420303 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 371907 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 1675874 27357731 ~ 27370519 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 3212836 28894693 ~ 28921123 (-)
AMCG00007768 NA other upstream 3319192 29001049 ~ 29013947 (-)
AMCG00007817 NA other upstream 5510153 31192010 ~ 31246649 (-)

Expression


Co-expression Network