AMCG00007692


Basic Information

Item Value
gene id AMCG00007692
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 26118096 ~ 26131010 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007692
TGAATTTGCTTAcaagattaatttgaaaaaaaaaaaagtttacctTATAAGTCCTATTGTTACCATCTCAAACTAATAATGATAGGAAAGCCGATTTCTCCCACCCACACGCATTGTAATGCTGTCTAATTGAACAATTACCGAGGCTATTTAGTGGGGATGAGGAACCCAAGTGAGGATGGACACATCTTGCGGTTAAGGGGTAAAGGTGTAGCAGTTGTGGAAGGAGTGCTGAGGTTTGAGTATGGAGCCCAGCTCCCCACCAAGTCTGACATTGTCCGAACACTGGTCACATTTGCCATTGAACAATCCATAGGGTCCAGGAAGTGGAAGATTGATGTGCATTCTATTCGATCAGGCGGGATCAGTCCATCTAACCTTGCCCCAGAAAAACTCCCCTTCAGGTTTATTCAAATTCATGATGCGAGTCTTGCCTCTATTTCTAATGAAGATGACCGCCGGGGACTGAGGGCTCAGGTGAAACGAGCAATTGAAACTGGCTTCCCAGTAGAGTCTGTGATGTTTGATGAGATCAGTAACATCTATGGCGATATTGAGGTTAAAGGTGCTGCTTTTCTCAACACAACCTTCCATGTGAAGACCCAGCTGGTTCTGCAGCATCTCTGCGGTCAGTGGAACCAGTTTGTGGACCTGACCACCCTCATCATCCGCGGGGAGGCTGCAAACCTGGAGACTATTCCACTGGAGTTCACTATTCTGAATAAGGAATACAACTCATCCGTGCTGGATCATTCCTCCCGATACTACAAGTCCCTCAGAAAAGAAGTCAGCCACAGTGTGTACTACGTCCTGAAGCCAAAGTTTGAAGCCTTGTTGCAAGTTGTAGTTCGCAATTTTTTgAGGGGTTCAGTCCTGGCAAAGACTGAAGTGGTGTTTCTGCGTACCTCTCCACATCCTGAAGACGTACTGTCTTTGATACTGGATTCTATCAATTCCAAACAGATCCTGAATGAAACTGGTCTGCAAATTGATCAGTACTCTGTCAGGGTTGTAGatatgaAACTGGATCGACCCGTGCAGAAAGAACATTTTCCGGGCTTTGGAGTTGCAATTATTCTCATGTGTGGGATAGTGATCCCAGTGTTGATTTGTATTGCTGTGCGGTTTAGAATCTATCGGTCCTGCAGAGCAAATACATTCTCGGCCATGGAGAGGTCTTCAGAGCGGGTAAAGTGTTTTCCGTTCTCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007692 True 1212 mRNA 0.45 10 26118096 26131010

Neighbor

gene id symbol gene type direction distance location
AMCG00007690 LOC107583870,LOC107742881 coding upstream 2488 26096726 ~ 26115608 (+)
AMCG00007691 ppcdc coding upstream 34675 26070759 ~ 26083421 (+)
AMCG00007686 loxl1 coding upstream 81732 26019814 ~ 26036364 (+)
AMCG00007685 NA coding upstream 409958 25698223 ~ 25708138 (+)
AMCG00007682 LOC102220226,LOC108442892 coding upstream 444945 25535554 ~ 25673151 (+)
AMCG00007696 NA coding downstream 1028481 27159491 ~ 27179372 (+)
AMCG00007698 NA coding downstream 1083760 27214770 ~ 27226777 (+)
AMCG00007697 ptpn9,ptpn9a,LOC106573036 coding downstream 1104984 27235994 ~ 27253888 (+)
AMCG00007700 sin3a coding downstream 1131495 27262505 ~ 27280545 (+)
AMCG00007701 wdr61 coding downstream 1186529 27317539 ~ 27324818 (+)
G25531 NA non-coding upstream 56850 26053701 ~ 26061246 (+)
G25445 NA non-coding upstream 666303 25451533 ~ 25451793 (+)
G25405 NA non-coding upstream 797071 25315787 ~ 25321025 (+)
G25367 NA non-coding upstream 1164768 24953125 ~ 24953328 (+)
G25302 NA non-coding upstream 1176516 24934479 ~ 24941580 (+)
G25561 NA non-coding downstream 3351 26134361 ~ 26134577 (+)
G25562 NA non-coding downstream 5757 26136767 ~ 26142288 (+)
G25574 NA non-coding downstream 131817 26262827 ~ 26270720 (+)
G25588 NA non-coding downstream 182353 26313363 ~ 26313565 (+)
G25631 NA non-coding downstream 1060159 27191169 ~ 27191379 (+)
AMCG00007640 NA other upstream 1618446 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 1923615 24192221 ~ 24194481 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 2448017 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 2924575 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 2978575 23133811 ~ 23139521 (+)
G25822 NA other downstream 1952812 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 2307634 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 2551161 28682171 ~ 28700062 (+)
AMCG00007763 tbc1d2b other downstream 2769048 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 2872085 29003095 ~ 29006379 (+)

Expression


Co-expression Network