AMCG00007693


Basic Information

Item Value
gene id AMCG00007693
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 26136652 ~ 26161514 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007693
ATGTCCGCCTGTAATACATTCACAGAACACGTGTGGAAACCAGGCGAGTGCAAGAACTGCTTTAAACCTAAAAGCCTGCACCGCCTGGCTGAGGGGGGTTTAAAGAAAGGCGGACAAGAGCAGCCGCAGCAGAATCAAGACACTTCTGGGGTTAAGCCCAACGCCAACCTAACAAACAACTACCAAAGGGGTAGTACACGCTCTGGACACTTCCGCCCCCCTGTGGCCAAGAAACCCACCATTGCTGTGAAGCCAACCATGATGCTGTCCTGTTCTTCAGCTGCCCTGGATTCAGAGAGCAACCACGGGCAATCGGATACTGCTGAAATAGGGAAAACCTCTGCTTTTGTGGTGTGGAACCGCAACGGGATGAACCGAAAGAGGCCTGACCTCTTCTTTGGCCGTATCAGTAGCTGCTATAAGCGCTCCTTGGAGCGAGGTTTGCCAGCATCCAGCTGTTTGGCAATTGGTAGTGGAAATGGAGTGTCTCAGAAACAAGTTTCTCTGAATGATAGCACGGAGGTGATTAGCTCAGAAGGTGGACGTTTCTGTTACCCAGATTTCTCCAGCGACGGTGAAGAGGATGAAGAAGATGGTGAGGAAGAAGGAGAGGGTGAACATGAGAGCTGGGATGAAAGTGATGAAGAGCTTTTGGCAATGGAGATCCGAATGCGAGGGCAGCCTCGCTTTGCCAACTTCAGAGCCTCCACCCTCTCTCCTGTGCCCTTTGCTGCGGGCAAGAAGTGGAACACCGTGCCACTCCGCAACCGCTCCCTGCAAAGGATCTGTGCTGTGGACTATGATGACACCTATGATGAGATCCTCAATGGATACCCTTCAGAGGATTCCAATGGGGTTCACATATTTGGCCCTTATGGCCAGGGGGACCTACAAGGTAGCAGCTTCTTCTCTAACTCAGAGTCTACAACCTCCCCTGAATCATCATCTTCTCTCCCAGAAGATTCCCGAACTACTTCCAGCAGTGGCAGTAGTGCCCCTTGCCGTCTACCTAATGGTCTCCCCTCACCTGCTGCATCTAGGGAGCCAGACTTTGAAATGGTCACTGAAAAAGAACAGGCTTCCAGAGTAGTTAGGTCCTGTAAAGCATCAGAGACCCACAAAGCAGTACTAGCAATACGACTTGAAGACCAGGATGGAGGACAGAAGGAGGGAGGAGCTGTAAAAAGCCCTTCCCTTCCTCAAGCCCTTCCTGGACAGCCAGTCACTATCAGCTTCAGCCCTGGAGAAGAGCAGGCCAAGCCCTATCGTGTGGTCAGCCTTGAAAAGCCAGCCATGTGTAAACCTTACACAGTGGTGGATGTCTCTGCATCCATGGCCAACACTGACATTCAAAGCCAGGACAGTGTTCCTAAACCCAAAGGGTCCTCATTCACCACAAGCCCTGCTTCCACACCTAGCTCTCCCTTAGGGcagcctctctctcccacttccCCAGCCTCTCCAACCACTGTATCATCCTCCACTGCACTCAACACCTCCCGAAAGAAATCAAGTGCCATCCGGTACCAGGAGGTATGGACTTCCAGCACAAGTCCCCGTCAGAAGATACCCAAGGTGGAGCTAGTGGGAGGGGGTGCTGCAGGCCCAGCTGTTCCCCCCAGGCACTGTAGCCACAAGTCTGCACCTACCTCCCCTACAGCTGGCCTTTCTTCTTCCTCCCGTACCGTGCCTGTGAAGTCACCCAACCTGTCAGAGATCAAATTTAACAGCTACAATAATGCTGGTATGCCTCCATTCCCCATTATTATTCGCGATGAGCCAACCTATGCTCGGAGTTCTAAAAATGCCGTTAAGGTGCCCATTGTCATTAACCCCAGTGCTTATGACAACCTAGCTGTTTACAAAAGCTTCCTTGGTCTTAGTGGAGAACAACCACAGACAAAACCAGGTTCAGGATGTAGAGTCTCTAGCCATACTTATGAGGAGATTGGATCCTCAGAGAGTATGCCATCCTCTCCTAAGGATACAACTGCTAATGGCAAAATATCTGCAGAGAAAGTTGCGGGAGAAGAAAGGAAAGCAGGCAGTGTTGCACAGAAGATCCAGGAACTCATTGCAGGAACCACTACAACTTCAAATACTACAACAATTACTGGtactactacaactgcagtCAATACTCAGGGAGGCTCCCTAGCCAAAACCAACACTGCTGCTGCCACTCCTGGACGCCATCGAAAGGTGAGCGGTGAATCAACACCTGGAAAAGAAGGCAACAGTGATCTGCCATCAACAAGCACTGGCCCTGTCCATCGTGAAAAAGCCAGTACTGTTCTGTCACAGATTGTGGCATCAATTCATCCACCACAGTCTCCACCAGAGTCACCCACAGTGCAGAGCAAAACCTACAGTGCTGAGGAGCTTTACTCCCTCCCACCTGATGCCACTAATGAAGCTCCAATAAGACCCAAATCACTTTTCTCTCCAGCTGAGGGGTGCCTTCCCAAACCTCGGAAAGACACACCTGCCAAGCAGCTGCCAAAATCCCAAAGCACCACAGCTGCCACTCCAACAAGTCCCAAGTCCGAACCCAATGCCCCCTTCCCACCTCCTAGATCCACTTCCTCGCCATACCATGCCAGCAATCTGCTTCAGAGACACTTTGGTAACTGGtccaaaccaacaacaactAGCCCCACACGGCCAAATGAGGCTGAATCTGCCCAGGGAGGAGAAGGCAGGAGGGCAGCAGCAGAGAGTGCCAAGCCCAAACGCTGGATTTCCTTCAAGAGCTTCTTCCGCCGGCGGAAGGACGAGGATGAGCAGCAACGAGAGAAGGCTGAACGTGAGAAGGAGAAGGGCAAGTTAGTGGGACTGGATGGCACAGTCATTCACATGCTTCCACCTCCCCCAGTCCAGCGGCACAACTGGTTTGCTGAGGCCAAGACTGATGATCCCAATCAGAAACCCACCATCATCTTCACCTATAAGCCAGAGCTTAGTGTTGCAGGTGAAGGGGAGTCAACCCAGACACATGAAGAGGAAAGCAAGCAGAAGTCCCTGGAGAGGCCAGAGCTGAAAGGAGAACAATCTACAGGACATCCACTGCAACAGAAGACTGCCAGCCATGTGCCAGGAGAGGGAAGTGGGAGTGAGATGCCGGCTGCCACCCCACTCCCTACCAAGCTTGAGTTGCCCCCAAGAGACGAGCCAGTGAGCACTGCCTTTACACCGCCCTCTGTCAGTGAGGGCACAGGGAGCCTGGAGGAGCGGGACGAAGAGGGCAGTGACTCGCCTGCTTCTAGCACCTGCAGCGCCACCTACAGCAACCTGGGCCAGTCCCGGGCAAATATGATCCCACTGAAGCAACCCAGGAATCCAAAAGCCTCAGATGATACTCTGGCTTCAGCAGAACATGAAGGTTCAGACAACGGTTCCAAAGCAACACCCCCCCCACTGCCGAAGAAAACCATCACACGGGCCCAAACGGAGCCCTCTGCATTGGGTAAAGATGCTCCTTCCCTGAGACCCAAAGGGGAGGCTAAACCAGGGGGCACGAATCTGAGTGTGGCAAACCCCCTGTACGACCTGGACTCCACCTGGGAGACGGCAAGCCAGAGCTCCTCTCAGAGCTCCGATGCCCGGCTGCTAGACCAGGAATCTGGAGACTCGTTGGAGAGACCAGCTGTTGGAAAGGGGAGGCCGGCCAACAGCCTGTCCTGTCTGACTTCATCCAACACCACTGCTACAGGCCGGGACCGGAGAGGCTGCCGCAGTGCGGAGTCTCTGGCTGTCCGGGGCAGGATGACAGGCAGGGGAGGAGTGTCCAAACCCCAGAGACAGGCACTGTACAAGGGCATGGAGAACTGGGAGGAGGTGGTGGGCCGCATTCGGgggctgcacacagacacactgcgcaAGCTGGCCAGCAAGTGTGAGGACCGCTTCATGGCAGGACAGAAGGACCAGCTGCGCTTTGGCACAGACAGCTGGTCAGATTTTCGTCTGACTACTGGCAAGCCATGTTGCGAGGCAGGTGATGCTGTGTACTACACGGCCTCCTATGCCAAGGACCCCCTTGTCAACTATGCTATCAAGATCTGCAAAAGCAAAGTCAAGGAGACGCAGCAGCAGTTTTTCCACAGTCTGGCTGTGAGACAGAGCCTGGCTGTACAATTCAACATCCAGCAGGACTGTGGCCACTTCCTGGCTGATGTGCCAGTCCGTCTCCTGCCCTGGGAAGACCCTAGCACtcctgaggaagaggaggaggaggaggatgaaaaagAAGCAGAGGAGCAGGGCACAAAGATCAAAAAGAAGATCGAAAAACCAACAGAGCCCAAGAATCCAAGCCACAGTTCAAAAGCCACAGGACACCCAGGTGGCACTGGGACCTGTGGAAAACTGCGCAGCCGTGTAGTTGTGATCACCCGGGAGGTGCCCTACCAAACCGTGGCAGACTTTGTGAGGGAGGGGGTGTCACGGCACGAGAGGAACCCAGACCTCTACGAACGTCAGGTTTGTCTCCTCCTGCTGCAGCTCTGCTCGGGCCTCGAGCACATGAAGCCCTACCATGTGACTCACTGTGATCTGCGGCTGGAGAACCTGCTCCTAGTGCAGTGCCAACCAGGAAACCCCTGGAACTTGGATGTGCTGGAGCCcaataacaacagcagcagtggAGTTGGCATGGTCACTTCTGCTGCCAACTCAGCCTGCCCTGCCCGGCTTATAATCAGCAACTTCTCCCAAGCCAAGCAGAAGAGCCAGCTGGTGGACCCTGAGGTCTTGAAGGATCAGTGCAGGCTGGCTCCAGAGATCATCACGGCAACACAGTACAAGAAGTGTGATGAGTTCCAGACAGGGATTCTCATCTACGAAATGCTTCACCAGCCGAATCCCTTCGAGGAGACCCCCGAGCTGAAGGAGAAAGAGTACACCCGGGCAGACTTGCCTCCGCTACCCTCCCGTTCCTTGTACTCCCAGGGCCTACAGCAGCTGGCCAGCTTACTGCTCAATGCCAACCCCTCTGAGCGCATACAGATCACAGATGCACGGGCCTGCCTGCAGTGTCTGTTGTGGGGTCCGAGAGAGGACCTCTTCCAGTCTCTGAGTGCCAGTCCTGGGCCGGGCCACAGAGAGGCAACCTTACAGAATTGGCTGGACCTCAAACGGACACTGATGATGATAAAGTTTGCAGAGCGTTCACTAGATGCTGGCTGTGGTGTGAGCCTGGAGGACTGGCTGTGTTGTCAGTACCTGGCCTTCGCCACCACAGACTCTCTGAGTCGTGTTGTCAAGATCCTGCAGCAgcaaaagcagcagcaacatcACTGAACTCAGTCACTTGTTCCCTGCCTTCACACTCCTGCTGCCCACCTCACACAATGACCatgcaaatcaaacaaacttctAGACATAGTAGGACATTTTGCAGTGGACCCAAGTGATTTTACTTTTACCAATGGTCTAAGCCaccaaaattattttttccttcataaaAATGGGAAAACTGTCTGGAAAAACATCACCCACCACATTTCTTCATCTCTCTTTCAATGCATAGCTTTTTGGGCTGTATTGAAAAAGTAAGAGTAATTCCCTAGTATTACTTAGTTTCCTTAaccaatgaaaaatacatttgctaaaTGATACTTCACAGAAGTCTCAAACCCAGATCCTAGACAGCGACAGAGTCTCTGGGGTTTCAGTTACTTAACTGGTGTAATTATTTGATTCATTGGACAAATTAATGCTTCTCTCCAGACCTCAAAATGATTATTTAGGTACAGTTAAAATCAAGTGCATTTACTTCTGGAGAtcttgaaaatatattcaatgtcCAATTGAGGAAATAATTAgcccaattaagtaattaagatctTAGTTCAGAACAGAAAGAAGATGACTCTGCAGCTCTCAGGGAACCACATACTTCGATTTaaacttgaaaaagaaaaggggggtTGTACAACACAACTAAAATGTGCAGTCCATTAGCCTGCATGAATACAGCCCTCACTCTATTGCGCTGTTTTTGGTTTACCATTAGTTTTTCTCTTCATTATTTCTCTGGTATTGTGGCATGAACAATCTTGCCTTTTCAGGCCATTGTATTTCACTTTACAAAGCTTAACTAGTTCCAGAATCCTCCATCTATTCAACACctatgtttaaagaaaaaacataatacaagcAAAGCTGTAACTTCATATGAAAGCTTTCATTTAAATGGGGAACTTGGGGAATGGGAAATGGTTATGGCTTAATCCATATTATCATAAATGTCTAAATTGGGAGGGCAGCGCACATAATCTCACTAATAGTTTCCCCATTCTTCCCCAGTGTTCAGTTTGTCCTTGGGCTTGGCATGAGCTGAGCTGTTCTGACCAGAAATGTCCTCTCAAGCAGATTCAAGTAATAGGCTATGCATTTGAAGATTTCTATTCAGAATGTCTAGAgctcaaaacattttctttaaaaaagctGCATAAATCGATATGTtttctgaaaggaaataaatgcacACCGGTGAAGAAATACGATCAGCTGAATGAATGTACAATGGTTCCTGCATGTAATCTGTCTCGGTAGGCTGGACAAATTATTGAAATCTTAAAAAGTATGAATTAGATTCAAGAAGAATTATGCCACAAGCGTGTCAccgtttaattattttaattgagtcTGGTTAAGATGCTGAGACATCAGAAAGGATTTTGACCTGTCTATAGTGAACCATAGTGTTTATTAAGGTTACGTTATGCACATCTTAAACGTACCGATCTGTGGTTCggtattaaaataatcataataacctAATGATGGATGTAGAACTTTTATCATCACTTTGTTTAAAGTAAAGTAATCTTTACTTGCCTGcccataattatatttttaatatatattgttaatatatcAATTTGTTCTTACCAGACCAgcattcatacattttctattaatgCAGGATTAACTTAATTATTTCATCATCCTTGTTTAACTCTTCTCTAGAATAGGAAGAGATTGATAAATAACCAAAGATCACCTTTATTTTCAAGCTGAATTATCACTATAATTactgaaaaatgaaatctgGTTGTTTGACCCTCaaattttttctttctcctgatTTTAAAGTGGCAATCAACAGACATCAGGTAAACAAGAGTTTTAATTAGCATTGAAAAACTGAAGTGCCCTTATTATAATAGTATACACAAACAATAAAGCCACAAGGCAGTAAAGCCTTTCTCAAATACTACGCATCAATCTTTCctctaaattaaatcaagagAATTGCCTTATATGAATTGCTATGACAATGGTTTGCATGCTGTGGGCCTAGATCTCCTTTTAGGTTTGGAAATTTGATTTGGTGGTATCAGATTACCGACAGAGTTTGGAAGTTTTGATTGAAAGCAGGTGTCTATTTTGGGTCAGAACAGCTCCTCCGTCTGATGCTCGTACCAATGAGTGAGTGGGGATGGGGTACAACTCCTCCTAATTTGGATACATGTgcaattattgtaaatgttttaactttGTAAATGACAGTATTGATCTTGTATGTACTTTATATTACTATATGCAACTTtggtgttttcttttcccctccTTCCTTTTGGCACATATTGACATGTAATGCCACGCACATGCCTCTCATTTGAGGAGGATAAGTGGGGCCAGGGTCACTTTCGAGAAAACCGCAGGAAGGTGTCTGTTTAATGCAGCGAGGTGTCAGGATGAATATACACAGATAATGGCCACTTAGGACATGTGTTTCAGGGACTGCCTGGTTTTGATTTCTTCTATCTTTAGGTGGTTTGGACTGAGGAAGTTGGCACAGCTAGTAAAACCACTCCTCAACGGAGTTCGTAACCAAGCCTTTTGGACATAAAGCTTGGAATTTGTTGCTGCtcggcaaaaacaaacaaaaaggtatTTCAGAAACTAGATTTGCCATTTTTCCTTTGTTGGTCAGGATAGAATACATTACAGTTCTATTATGAATATGCAAGATCTTGGGTTAATTGACTTTGTTTGTATTCGAGCATAAGGTACCCAGAAAGCACATAAGCAATTAGCTTTCTGTTAGCCGTTCCATCACTCACCTCATTGATTGTAATGAGATTATTgactattttaaaacacaaatgtgttgtAACCACTAGATCTGATGGCCTTGGGTTACTAGATGTGTACCACTGTCTTGTCACCCCTTACCACTCAGCCGCACCTCCTACAACTAGTGTTACTTACTGCAGCCAGCCACTTAAGGCCACACCAATCCTCCAGACTTGTAGTTCATCCTGTAAGTTTTCTAAACTGCTTTCTTAACTAGAGGCTTCTAGTGCACAAAGGGTGTTTACCCACCCAAGAGCAAATCAATACTCTGTGAATGTCTGCATTTCTCCAAACATTAGGAAGTTATTGTGTCTTATTTGGTAATATTTAACACTTAGTGTTTtggctatattatattttgttttagagaaaaagaaagaaacagaaagtgaGCAGAATGTGCTACAGATTGCCAACCGCTGCAAAATGATGATGCTGGATAGGACACATGCGGTGATAAAAGGCTACTAGTAACAGCCAGGGTTGTCCATGGACTCCTCCTGCATGCAGATCTATCAGACTGAGCTTTTCATCTCAGTGTGTCCTCACAAGGCTGAGCTGCAACTGGCTGGTATGAGATGGACTGAATTTGGTCAGGAATGTGCTCGAAATAAGCAGAacttttgtcaattttaaaatgtaaaatatatgggTTATCATGTGGTGATAGTCTTGAAAACAAGTAGCTACCATTCACACCCAGCCTCACTTAGTTCTCTTGTACTTGATTTAATCTtttctaataatacatttcaaattcaggTCTATGGGTGAGTCTAAAAATGAGGTCCTGGGCTACTGCTGTTACTACTATATCTGAGGAGTCACACATGTGTGGAATGCACTGGGGCTGTCCATTGTTGGAGAGTCAATATTTGAAGGTAtgataatacatatacagtatatatcacTAGTACCAGATGTACAAGACTGCCTAAAAGGCAGGGAAGACCACATTAGTGCCATTTCTAAACAAGCTTtgctgtttgtattttaaagctgtGAGCTAATATGGGAGAGCTCTTAGCCAGAAAAAAAACCTTTGGGATacaaaaatgcatcagattttctttttttctatttcttcttttgAACATGTCACATTTGATGCTTTATATTTGAGCGCTCAGTACATAGACAGTGAGCTTTGTACATGAGCTTTTCAGCACCTTGGGGAGAGAAGTTTTGCACATAAGAAtctgtacagtattttttttcccacctcCATTATAACAGGAAAAAGGTCAACAACTACTGATTAGGAATTTGGCTGGGGAGTCTACTAGTAAAACTAACAGTTCTCCATCTGTTATTCACTAGTTTGTCAATGTGCAATGTGTCAAGGTGCATAACTGTTGTTGACCACGACCCAGAAGGAGCTATAAGACTGAAGTGTGCTTCTTTGGGGTTTACATTATAACAGACCCACAACATGGAGAAGAGCTCTCATAGCTTATGTATATCTTTTGGCGTGTTGCCACTAATTGTTGGTCAAGTTAACCAATGttaatgaaacaataaatatatgtttttataaaaaataaaaatactgactATCtcttgcatttttcatttataaaataaaacaagataac

Function

GO: NA

KEGG:

id description
K17538 PEAK1, SGK269; pseudopodium-enriched atypical kinase 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007693 True 9683 mRNA 0.46 5 26136652 26161514

Neighbor

gene id symbol gene type direction distance location
AMCG00007688 NA coding downstream 241051 25863022 ~ 25895601 (-)
AMCG00007689 NA coding downstream 454795 25672605 ~ 25681857 (-)
AMCG00007683 LOC107739093,LOC107712505 coding downstream 477933 25653720 ~ 25658719 (-)
AMCG00007676 LOC106587228 coding downstream 682249 25390189 ~ 25454403 (-)
AMCG00007675 chrna5,LOC106587222,LOC108440259,LOC106562132 coding downstream 756257 25365037 ~ 25380395 (-)
AMCG00007694 hmg20a,LOC102798875 coding upstream 101474 26262988 ~ 26272450 (-)
AMCG00007695 LOC107560004,LOC107562294,LOC107727415,LOC107673268 coding upstream 317517 26479031 ~ 26480878 (-)
AMCG00007699 snx33 coding upstream 1038129 27199643 ~ 27212764 (-)
AMCG00007706 crabp1,crabp1a,LOC105895658 coding upstream 1131913 27293427 ~ 27307131 (-)
AMCG00007705 s2544,LOC108438536 coding upstream 1163187 27324701 ~ 27334387 (-)
G25446 NA non-coding downstream 684630 25451763 ~ 25452022 (-)
G25421 NA non-coding downstream 880291 25252716 ~ 25256361 (-)
G25415 LOC108275329,LOC103046663,LOC108436939,LOC105912564,LOC107696286,LOC103375935,LOC106584709,LOC104942717,LOC107753195 non-coding downstream 889273 25207774 ~ 25247379 (-)
G25387 NA non-coding downstream 1147598 24988845 ~ 24989054 (-)
G25375 NA non-coding downstream 1154513 24981934 ~ 24982139 (-)
G25615 NA non-coding upstream 837792 26999306 ~ 26999546 (-)
G25617 NA non-coding upstream 867457 27028971 ~ 27029294 (-)
G25620 NA non-coding upstream 908372 27069886 ~ 27070099 (-)
G25655 NA non-coding upstream 1092715 27254229 ~ 27257033 (-)
G25697 NA non-coding upstream 1192454 27353968 ~ 27355254 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other downstream 65804 26053764 ~ 26070848 (-)
AMCG00007684 shf,LOC108430988 other downstream 505060 25630792 ~ 25631592 (-)
G25422 NA other downstream 871701 25264332 ~ 25264951 (-)
AMCG00007637 NA other downstream 1855088 24262690 ~ 24281564 (-)
G25026 NA other downstream 2163987 23971671 ~ 23972665 (-)
AMCG00007704 NA other upstream 1196217 27357731 ~ 27370519 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 2733179 28894693 ~ 28921123 (-)
AMCG00007768 NA other upstream 2839535 29001049 ~ 29013947 (-)
AMCG00007817 NA other upstream 5030496 31192010 ~ 31246649 (-)
AMCG00007822 NA other upstream 5177202 31338716 ~ 31342792 (-)

Expression


Co-expression Network