AMCG00007712


Basic Information

Item Value
gene id AMCG00007712
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 27566167 ~ 27569541 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007712
aatgacagtATGGTCTCCCCTAGCATCCTTGCCCCAACATGTGTTGTGCTCTCCGATACGAGTCCTAACCCAAGTCTTCCCGAGATGGGGGTACGGCAGCTTCGACATCCCATCAGCATTCATTGCAGACGTTTCTCAGAAACATTTTCGGATGCTTCGTGCTGTAAGTCAGAGCGCAGGCGCGGCGCGGCGGCGCAGTGGGCTCTGCTCTCCGCACAGGGGCCGGGCTTGTGCTGTGTGGGTGGAAACCAGGCCTGCAGCGCATCGCAGTCTCCTCCCCGGATACTCGGTGCGCTTTCCGGGCCCATTGCTGCTTTTATCTCCGCCACGGCTTCACTTCATTCCGTTTCATGGTTCGGATCCTAGAGAGAAGGATGAAGCTGTTCTTTGCTGTCGCGATTATCGCCGGGTCGGTGATATTTCTGCTGTTCCCCAGCGGATCCGTTGCAgatgagaaaaagaaagggcCAAAAGTCACGCACAAGGATGTTGTTAAGAAGATTGAGGCGACTAAGACTGATGGCAGGGACAAGCCATTGAAAGATGTGACGATTCACAAAAGTGGGAAAATTGATGTGGAGAAACCATTTGCTGTTGCAAAGGAGTAACTAGTAATAGGTTTTTGGGTTTGGGGGTTAAAACCTAATTTCTGGAGGTGTTCCTCTGTGAGAAGTCCCCACCGCTCAAGTCCTCTGTGCTGTACTTGACACAACTGAGAAGGACACCATCTTTAAATCGAACAACAGCCTGACCACCATGCAAAAGATCACGGGTCCACTTCCAAAAGGCATTCCGAATGGGATTGTCCAACGGTTACctgcttttttaatgtaaaacaaaataaaagttcccattttttgttaaacatttgttttttgtttttaccaaaCCTACCATATCGGGACATATGCTGCAGTTATAGTTTTCGAACTCCATTAAaccactttctttttttttttttcctctctctctcaaccctGTGAAATGTAAACTCATCACACCCATCAATAAGTGGCACTTACTGACAATTAAGTGTTggtattaaaaggaaaaatttaaaaatgccacTTCTAGATGAACACCCTGCTTACTATTGCAGACAACTTTAATCAAAACCAACCTTTTAAATACAGCCCCCATATTAATTTCTCTAATGACCATACTCAAGCGATTTTAAATTTCCTATCATTTTCAGTGATATTAATCTACCTGATTCACATGTGCATAATGGAACGTTGGCAACAATTCAGTCATAATTGAACTTCGCAGAGTAGTTTGGAAGCTGCAGTTGTACCCAAAAGAGCAGATGTTTTGCACTGATGAAGTAGGGGCAAGATGTTGACAGAATATTGGCcagagattattttaaattgactgaAGTACTTGTATTTCAAACATGCCAAAGCAAAACTGCAACAATGGTT

Function

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007712 True 1424 mRNA 0.44 2 27566167 27569541

Neighbor

gene id symbol gene type direction distance location
AMCG00007713 NA coding downstream 33446 27518538 ~ 27532721 (-)
AMCG00007705 s2544,LOC108438536 coding downstream 231780 27324701 ~ 27334387 (-)
AMCG00007706 crabp1,crabp1a,LOC105895658 coding downstream 259036 27293427 ~ 27307131 (-)
AMCG00007699 snx33 coding downstream 353403 27199643 ~ 27212764 (-)
AMCG00007695 LOC107560004,LOC107562294,LOC107727415,LOC107673268 coding downstream 1085289 26479031 ~ 26480878 (-)
AMCG00007719 NA coding upstream 97980 27667521 ~ 27672745 (-)
AMCG00007722 LOC106562765 coding upstream 303722 27873263 ~ 27879135 (-)
AMCG00007724 NA coding upstream 309719 27879260 ~ 27884397 (-)
AMCG00007726 LOC102788062,LOC101156874,LOC100699863,LOC102296031 coding upstream 487894 28057435 ~ 28063864 (-)
AMCG00007730 NA coding upstream 515145 28084686 ~ 28099269 (-)
G25750 NA non-coding downstream 1458 27564039 ~ 27564709 (-)
G25749 NA non-coding downstream 2477 27563240 ~ 27563690 (-)
G25748 NA non-coding downstream 3149 27562728 ~ 27563018 (-)
G25746 NA non-coding downstream 12057 27553497 ~ 27554110 (-)
G25726 NA non-coding downstream 25231 27429757 ~ 27540936 (-)
G25768 NA non-coding upstream 92683 27662224 ~ 27667072 (-)
G25968 NA non-coding upstream 1107299 28676840 ~ 28702537 (-)
G25972 NA non-coding upstream 1126924 28696465 ~ 28699849 (-)
G25985 NA non-coding upstream 1163223 28732764 ~ 28732994 (-)
G25987 NA non-coding upstream 1164571 28734112 ~ 28734449 (-)
AMCG00007704 NA other downstream 195648 27357731 ~ 27370519 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other downstream 1495319 26053764 ~ 26070848 (-)
AMCG00007684 shf,LOC108430988 other downstream 1934575 25630792 ~ 25631592 (-)
G25422 NA other downstream 2301216 25264332 ~ 25264951 (-)
AMCG00007637 NA other downstream 3284603 24262690 ~ 24281564 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 1325152 28894693 ~ 28921123 (-)
AMCG00007768 NA other upstream 1431508 29001049 ~ 29013947 (-)
AMCG00007817 NA other upstream 3622469 31192010 ~ 31246649 (-)
AMCG00007822 NA other upstream 3769175 31338716 ~ 31342792 (-)
AMCG00007835 LOC107594750 other upstream 4235358 31804899 ~ 31816151 (-)

Expression


Co-expression Network