AMCG00007730


Basic Information

Item Value
gene id AMCG00007730
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 28084686 ~ 28099269 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007730
ATGACTGCAGAGCTGCGTGTTGCTGGTTGCGGCCGCTTGCCTCTGCTATTCCGCCCTGCGTCTGTGGAAACAGCCGGACGGCCGAGTTTTATCCCAAAGCCACTCGCCACCGCGGCCAAAACGACCCGGTTTCCTTCTCCATCTCACAATATGGATGTCTCCCTTTGGGAACAGAAGTGCAGCGGGTCCCGCTTCAGCGCTGCACGGTGGCTCTCCTGCCTCGGCTTCTGGCTGCTGCTGGTGCCGGGGGCGCAGGGGGTCTGGCCGCTGCCCCAGCAGTTTGTCCAGACCGCCGAGAGGTACCCGCTCAGCCCGCAAGTGTTCAGCCTGGAGTACGCCAAGCAGTCCGCCGCGCAGCCCGGCTGCTCGCTCCTGGACTCGGCTTTCAAGAGATACTTCATGCTGACTTTTCCGGGTTACGGTGAAAGTTTGCGAACAGTAAGAGAGAAGCAGAATGTCTTTGCCCGTGGTGGACCCTCTTATGTAAATGCACAACCCGGCGGACTGATTGTGAATGTAAAGGTAGCTGATTGTGATGGCTACCCTGACCTGGATTCCAAAGAGAACTATATGCTAAGTGTAGCTGATGGCTGGGGGATGCTGACTGCAGACTCATATTATGTTAACAAGACAGAGGTTGCCGATTTTCCCCGTTTCCAACACCGGGGACTCCTACTGGACTCTTCCAGACACTACTTACCTCTCCACACCATCCTAAAGACACTGGATGCAATGGCCTACAGCAAGTTTAACGTGTTTCACTGGCACATTGTGGATGATCCCTCCTTCCCATACCAGAGCATCACCTTTCCTGACCTTAGTAAGAAGGGGGCCTACCACTCCCAGACACACATCTACACCATCAAAGATGTGAAGAAGGTTATAGAGCACGCCAGGATGCGTGGAATCCGAGTAATTCCTGAGTTTGACACTCCAGGCCACACCCAGTCCTGGGGACCAGGGCAGCCTGGCTTACTGACCCCATGCTACAAAGGATCGGTTCCCTCAGGGACGTTTGGCCCAGTGAACCCTGTTCTTGACTCCAGCTATCAGTTCATGAGCAGCCTCTTCAAAGAGGTGGCAATGATTTTCCCAGACTCTTACATCCATCTGGGAGGGGATGAAGTGGACTTCACCTGCTGGAAATCTAATCCAGACATTCAAAAGTTTATGTCATTGATGGGATTTGGGACTGACTACCGGAAACTGGAATCGTATTACATTGGAacACTCGTGAATATCACAATGACCCTGAAGAAGAACGCCGTGGTGTGGCAGGAAGTGTTTGACAACAACGTTCAACTGAGCCCTCTCTCTGTGGTGGAGGTGTGGAAAGGCAGCTGCTACCATTGCAGGCTGCACAGGATCACCGGGGCTGGGCTCCGTGTCATCCTGGCTTCTCCCTGGTACCTGGAACCTGGCCGCCCCGGGCAGGACTGGGTTCGGTATTACTCAGTCCGGCCTCTTGATTTCATGGGTCAGACAGTACCCAAGGACACAGTGGTGCACGTGTGGAAGGGCAACATGgagcagtacagcacagagatGCAAGACATCACAACCGGGGGGCTCAAGGTCCTGCTCTCCTCTCCCTGGTACCTCAACGTCATTTCGTACGGCCAGGACTGGCAAAAAGCATATGAAGTCAAGCCACTGAACTTCAATGGCACCGCTGAGCAGAAGAAGCTGGTGATGGGGGGAGAAGCCTGCATGTGGGGGGAGTATGTCGATGCCACCAACTTGACTCCTCGCCTGTGGCCGAGGGCGTGCGCAGTGGCTGAGCGGCTGTGGAGTGATGAGGAGCAGACCCCTAGTGCGGGCCAGGCGTACCCCCGCCTCACAGAGTTCCGCTGCAGACTGCTCAGGTATGGGCAGCCCTTGTGTCCTGGGCTGGGCTGTGATCTGAAGGAGGCTACAGAAGCTTCCTATCTCAGGGAGAGCATGCTGATCCTGTCTTTAGAGCACGAGAGCATCGGAGAAGGCGATCTATTGTTAGAGAGACATCCTCGAGCCTGA

Function

GO:

id name namespace
GO:0016798 hydrolase activity, acting on glycosyl bonds molecular_function

KEGG:

id description
K12373 HEXA_B; hexosaminidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007730 True 2016 mRNA 0.55 13 28084686 28099269

Neighbor

gene id symbol gene type direction distance location
AMCG00007726 LOC102788062,LOC101156874,LOC100699863,LOC102296031 coding downstream 20822 28057435 ~ 28063864 (-)
AMCG00007724 NA coding downstream 200289 27879260 ~ 27884397 (-)
AMCG00007722 LOC106562765 coding downstream 205551 27873263 ~ 27879135 (-)
AMCG00007719 NA coding downstream 411941 27667521 ~ 27672745 (-)
AMCG00007712 NA coding downstream 515145 27566167 ~ 27569541 (-)
AMCG00007728 arih1,LOC108423892,LOC107742882,LOC107672283,LOC107549652,LOC105892496 coding upstream 5199 28104468 ~ 28128157 (-)
AMCG00007729 NA coding upstream 34269 28133538 ~ 28182525 (-)
AMCG00007731 NA coding upstream 84282 28183551 ~ 28194125 (-)
AMCG00007732 LOC107569349,LOC107754357 coding upstream 143048 28242317 ~ 28266497 (-)
AMCG00007738 bbs4,LOC107754319 coding upstream 282778 28382047 ~ 28399893 (-)
G25768 NA non-coding downstream 417614 27662224 ~ 27667072 (-)
G25750 NA non-coding downstream 519977 27564039 ~ 27564709 (-)
G25749 NA non-coding downstream 520996 27563240 ~ 27563690 (-)
G25748 NA non-coding downstream 521668 27562728 ~ 27563018 (-)
G25746 NA non-coding downstream 530576 27553497 ~ 27554110 (-)
G25968 NA non-coding upstream 577571 28676840 ~ 28702537 (-)
G25972 NA non-coding upstream 597196 28696465 ~ 28699849 (-)
G25985 NA non-coding upstream 633495 28732764 ~ 28732994 (-)
G25987 NA non-coding upstream 634843 28734112 ~ 28734449 (-)
G26092 NA non-coding upstream 932141 29031410 ~ 29049165 (-)
AMCG00007704 NA other downstream 714167 27357731 ~ 27370519 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other downstream 2013838 26053764 ~ 26070848 (-)
AMCG00007684 shf,LOC108430988 other downstream 2453094 25630792 ~ 25631592 (-)
G25422 NA other downstream 2819735 25264332 ~ 25264951 (-)
AMCG00007637 NA other downstream 3803122 24262690 ~ 24281564 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 795424 28894693 ~ 28921123 (-)
AMCG00007768 NA other upstream 901780 29001049 ~ 29013947 (-)
AMCG00007817 NA other upstream 3092741 31192010 ~ 31246649 (-)
AMCG00007822 NA other upstream 3239447 31338716 ~ 31342792 (-)
AMCG00007835 LOC107594750 other upstream 3705630 31804899 ~ 31816151 (-)

Expression


Co-expression Network