AMCG00007747


Basic Information

Item Value
gene id AMCG00007747
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 28619421 ~ 28623990 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007747
ATGGCCAGCCGGTATGTGAACCGGGTGTGTGCAGGCGTGGTGTTTTCCGGGGCGGTGGAGAAATCAGAGGTCAGCAAGAACCCCGAAGTGCCCTTTGCTAGCGAGGCCTACCGCATCTCAGCCACCTCTCGAGGGAAGGAAATGCGGCTCACCCTCACACCAATCGAGGGGGAGGACAGCAAAGATGGAGGCGAGACCGGGGACCCACAGCCCATGGACGTGGTCTTCCGGTTTGGAATGTCTGGGTTTTTCCGGTTCACCCCGGAGGATGAGCTGCCCAAGCACGCCCATCTGCGCTTCTACACCAGGGAGAGGCCGCGCCAGGCTCTGAGTTTCGTTGACATCAGGCGGTTTGGCACCTGGGAGCCCAATGGGAACTGGCAGCCAGAAAGGGGGCCCTGCATCATGGAGAATGTGTTGCTGAACCTATTGGACCGTGCGTTTGACAGGCCCATCTGTGAAGCTTTACTGAACCAAAAATACTTCAATGGGATTGGGAACTACCTGCGAGCAGAGATACTTTACAGGTTAAAGATCCCCCCATTTGTAAAAGCAAGGACAGTGCTGGATGGGCTTCTATTAAAGGACCATGCTGAGAAGAATGCAAAGCGTGCCAAAGAAGAGAGCACACCCGTTCAAGTGTCAGAGATGAGTCTGAGTAAGAAGGTGAAAGTGAAGAGGGAGACTCCCGATCTCCTCAGTCTGTGTCACACTGTGCCTCTCGAGGTCCTCCAGTTAGGGGGTAAGGGCTATGACCCAGAGCAGTCTGGCGACTCATCCTTCCAGGAGTGGCTCCAGTGTTACTGCGTGTCAGGGATGAAGTCCTTGAGAGACCACAATCGCAGGACCATGTGGTTCCAGGGAGATGCTGGACCCATGGCCCCAAAAAACTCTAAATCTCCCAAAGCAAAGAAAAGAGTTACAAAGCAAGGAGGAGATGAAAGCGATGACAAGCAGGTGGTGCAAGAGAAGTTCCAGGACAACAAGGTGAAAGGGGATAAAGAGGAGACGGAGGGAAAGACAGGATTGAAAAGGGGGAAAGGTGCTGAGAGAAACCTGGAAGCCACCTCTCCAGTGAATAAAGGGAAGACGATTCAGAAGAGGAAGACTGCAACAGCGGAACAAGCAGAAAGGCGCAGTGGGAGAATGACACGAGCCCGGGCTAAACAAGGCAgctaaaacacaattcaaaggAAAGAAGACCAACTACAATGAACCACCATTATGgcccattttaaatgtatatttttgaattcCTTGGGATacttttttaacttaaaaatatttttttagcaaaaaatattaaataaaataaa

Function

GO: NA

KEGG:

id description
K10567 NEIL1; endonuclease VIII-like 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007747 True 1316 mRNA 0.51 9 28619421 28623990

Neighbor

gene id symbol gene type direction distance location
AMCG00007746 commd4,LOC105008267 coding upstream 2023 28612614 ~ 28617398 (+)
AMCG00007741 NA coding upstream 43171 28551820 ~ 28576250 (+)
AMCG00007734 NA coding upstream 181386 28431981 ~ 28438035 (+)
AMCG00007736 mpi,LOC106560745 coding upstream 198125 28414965 ~ 28421296 (+)
AMCG00007733 LOC107745566 coding upstream 241169 28367268 ~ 28378252 (+)
AMCG00007745 aph1a,LOC103368490 coding downstream 13906 28637896 ~ 28646093 (+)
AMCG00007753 NA coding downstream 77991 28701981 ~ 28717335 (+)
AMCG00007751 NA coding downstream 99133 28723123 ~ 28729718 (+)
AMCG00007752 NA coding downstream 142725 28766715 ~ 28776364 (+)
AMCG00007756 NA coding downstream 308975 28932965 ~ 28936834 (+)
G25827 NA non-coding upstream 509831 28104602 ~ 28109590 (+)
G25819 NA non-coding upstream 541300 28070346 ~ 28078121 (+)
G25753 NA non-coding upstream 1047930 27570543 ~ 27571491 (+)
G25709 ppib,LOC102792920,LOC107680152,LOC107577199,LOC107754356,LOC107673286 non-coding upstream 1050068 27566695 ~ 27569353 (+)
G25699 NA non-coding upstream 1263344 27355874 ~ 27356077 (+)
G25984 NA non-coding downstream 107140 28731130 ~ 28731401 (+)
G26103 frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903 non-coding downstream 450466 29074456 ~ 29082381 (+)
G26146 NA non-coding downstream 687633 29311623 ~ 29311944 (+)
G26167 NA non-coding downstream 743383 29367373 ~ 29367723 (+)
G26171 NA non-coding downstream 750386 29374376 ~ 29375878 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other upstream 164714 28438644 ~ 28454707 (+)
G25822 NA other upstream 524680 28083822 ~ 28094741 (+)
AMCG00007640 NA other upstream 4119771 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 4424940 24192221 ~ 24194481 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 4949342 23657850 ~ 23670079 (+)
AMCG00007754 NA other downstream 58181 28682171 ~ 28700062 (+)
AMCG00007763 tbc1d2b other downstream 276068 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 379105 29003095 ~ 29006379 (+)
AMCG00007788 NA other downstream 998321 29622311 ~ 29724734 (+)
G26258 tpm1,tpma,LOC108237348 other downstream 1131050 29755040 ~ 29819552 (+)

Expression


Co-expression Network