AMCG00007748


Basic Information

Item Value
gene id AMCG00007748
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 28647011 ~ 28674262 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007748
GTAAAGTGGACATACACTGgccCTGATGGAGAGCCCAGCTGGTCGAAGACCTACCCCTTCTGCGGTGGCGTATTCCAGTCACCCATCGACTTCCAGACAGAGCTGCTCCAGTACGACCCCACACTCAGACCCATAGAGGTCAGGGATTACAACCTGTCCACCCTGGAGCAGCTGACCCTGGGAAACAATGGCCATTCAGTTCAGCTATCTCTGCCATCCCAAATGCACATTGCCAGTCTGCCACACCGTTTCTCAGCCTCCCAGCTTCACTTCCACTGGGGGAGCCCCAACAAGCCAGCCGGCTCAGAGCATGCCATCAATGGAAATCAGTTTGCAGCCGAGATGCATGTTGTACATTTCAACTCAGACAAATACCCCAACATCTCAGTGGCAGCTGATAAACAAGACGGGCTGGCCGTGCTGGGAGTGCTAATCGAGTTGGGCCAATACAATCCAGCCTTTGATCAACTTCTCGCCTACATTAATCGCATCCAGTTTAAAGATCAAAAAGTGCAGGTGCCGGCATTTAATATCCGAAGCCTCCTCCCTGCTCGGCTAGATGAGTACTATCGCTACGATGGCTCCTTGACAACTCCCCCCTGCTACCCCAGCGTGCTCTGGACTGTGTTCAGGAACCCGGTCAGCATTTCACAGCACCAGTTCCtgtctctggcaacagctctatATGCTTCTAGCGAGCAAGAGCTCAACCTTGTATCTTTGAAGGAGAACTTCAGATCGTTGCAGGAGGCCGATGACCGGCGCGTCTTGGTTTCTTTCCGTGATGGCCGAGGCCTTGCAGTCATGATGACGCCCCCATTCCTGCGGCGGCAGGTCGTGCAGCACTTGCTAGCTGGCGACCTATCGGACCTGGAGGACGAGGGAATGTCCCGGCTGCTCCCACACCTGGCCCACAAGCCAGGGGCCGGCAAAATGTCAACCGACCGCAAGCACCAACACAGCTGGAGCCGCACCTTTCCAAACCAGAAGTTGCCTAAGGTGAAGTCCCAAGATGGCGCCAGTTTATTCACTTCGCACTGGAAGAACTCCAGAAACACGGGGCTGGCTGGCAAGTACTGGCCTTCAGACAGCAAGCTGTGTTTCACTACTCTGGAGCAGCGGGTCAGGCACCGGTTAAAGGGGATTCCCACGGACAGACAAGTGGTGGAGGCCGTTAAAGAGGCTGTCTTCCCAGAGCTGAACCTGATGAGTTACCTAGACTGCAAGTCAGAGCTCGCCTTGTCCACCATCAGGCACCTCCTCCGCCACCGGCACACGGACGAGGCCGCAGAGCTGGAGCACACCCTGAACAAAGTGGGCCAGCGGGCAAGGAAGACTCCCTCTGTCCTCCAGATGATCTCGGAGGATGCTAACCAAGCAGGTCTCTCCACCGCCACGACACGCAAGAGCCCTCACAGCAAGGCCAGTCTCCGCCCGCACCTGCAGGAAGTTGAGTGGGAGGATTAGAGTCATGCTGGGCCAACAGGAGGCACTTGGCCTGGACACtcaaacaacaaccacaacccAGGGCATGAACTGGGCAACACCTCCTGAGAATAATGAAGTAAATccctgagagaaagagacaacAGACAATAAGACTGTATACGTGAAGAACCTACCCATGCTAATTTGATCGCTAAATACAGAGACACTTGCTTTTCAGAAACATATACCCAACAAGTTCCTAGGTctacattaataaataccaTCAAAATGTTGCAATAATATTAACTCTCTGCTCTCACAAACACGGAGCAATACGGGAGCTGGCTCTCCAGACATATTTTAGGCTAGAGAAGATCTGTAATGTAGAACTATCTGAGTTCCAAAATGTCTATTGAGGTTAATGAGGAATACGGGTATTTGAGCATTTTGAACAGTGCTTAAAGTGACATTTCAGTACTGTAAGTGATGTATAGTCAGAGATTAATTAGTAACCATATCAGAATGAAAATTGTAATGCATCACTTGGGAGAAACTTTAGTGTGCTACCAAACTCAAATTTAAGATGGAATTATGGATGATTTTGAACAAAAGGCACTTTATAGTGTTCTCTACTGAGACTTTTTCACAGATGACTGATGTACAGAATTGTATGTAAGACCTTCTTGTACATGACTGTAGCAGTTCTGCTCTTCGAGTCAGACTTTCTTTGTATGACACGTCTTAAACCTAtcgttatttaaaaaatgtcatgaaTGTAAAAATGGTGCTTATTACTTtgatgatatttttaaatattcatagaAAATAACTAGTTATGCAGGGTTGTAATTGTTATATACATAAGTGGTTAAAATCATGGATGTGTGGGAACGGAAGCACtatggtcatttgaaaagatttactagcatgtaaatatataagGCTGTATATTTTCGTCAGCACGTTGGgtgtgtcatttaaaatgaaaaggaaaccaCTTAGAGGACTGAGCTAGCAGATTTTCCGAAAACGATATCCTAATATGAGAGATGGTAAAATAAACTAATCATGCTGAATAATATTCACTTGATTTGATTCATTGTAAAGCAACGTTACTCTTAgcaatactataataataaaaaatagttgAGGAACTGTAAGACCTATTactgtttttcttgatttataatttatatttatttatgtttttagaaaatGCCTTTGGGTTTAAGTTACATACATACTGTAGCAGTGTAGTACAGGTGAAATGCACCCAGTATGGtggaactaaaaataaactgagctTTGAAGCGATTCAGccccatttattttagtaatttgaGGGTTTGGtagaatacaatacatttacagagagaaagagaaagaaaaagctttttagCTACTTTCTGAACTTGGTCCAATCTGCCTataaatgcatgtgtgtatgtgtgtgtgagtgtggggaCAATGGGTGATTATCTGGGGACTTATAATCATACAATTGATATTGAAAGCCTGCCTCTGTAAAGACTAAATTACACCTATATACTATATTTTTCCTCCTAAGCCACACCTTCATCTTCCTTCTTTTCCTCTTCCTTACAGCATTATATTCTGGGGGGCATGTCTGCAGCTTGGTGTTTAATCTGTCAATCTTTTAGTAAGActtcctttctgtttttcttttcaagacCTAGGTCTCCTTCTTGGGATGAGATGGGGTATGTTGTCACTTCTGTGATCTGCCTCTgtcgtgtgtgttttttgtgtgatcGCCTGCATGTTTTCGGTGTGCCAAACATGTCATTCTTTCTGCTGTTTCactcttcatttatttaaaaatcacagatgCAGTAAAGGATACAACTATAGGGTGAGGATACACCAAGCCTTTTGTGAAAGCATTTAAATGCTATGTATTTAACAgctagatttttatttttttattttttttggcattttaatttagtgtaagtaaataaaaatcaaaggcATTCATTAAGGGATATATATACAGGCACTGTATTCCAAATGGCTAGGGTTGCAAATGGACACATTTAACTCCCCATACATATTAAgtgtgaagattttttttaatgttttacatttacaaagtttCCTAAATTATATGTGAACAAAAGCCCTTACTAATGCATAATAAACCTGGTTCCCACATTCCAATTCATCACTGTAGTATGACTCAACCCAACCCAGCTTCACACATTCTTGGAATGAGTatcaaaacatacaaagatCCGGGGGCCAGACATATACACAGCGTCACAGTGAGATATATCTACAGTAATTCAAATATAACGCTGTCAGCTACCTCTTTTATTCCTCCTTTGTATTACAGGTGTGCTTCTCTCTATTGTCATCGCCTCTGTGCTGGGACTCATCCTCATTGGGACTCTTGTGTTCTTCGTGCTGAGAAAGAAACGAGCTGAGAAGAACCTGCAGAAGGACACAGATGTCATCTTCAAACCATCCAGCAAGAAAGAGGAAGATATTTCCAAAGTATAACTCCTCAAAAGCCACTGTCTTCCAAGATGTAGTGAAAAAAGAAACGCTCAGAAATACATGGTGCACAATGAAGTCAAAGCTACACCATGTGTATAAACCTgtttgtccatttttttttttttacattacatggAGACTATTTTGTACACTGTGGGTTGTGtgcaacatatatatacagctctggataaaattaagagaccactgcaattatttcttaaatcagcatctctacatgtatggcagccattccattcatttttttatttggaatttgggaaaaatgttttcagtagtttgtagaataaaacaaaaatgttcgttttactcaaacacatacctataaatagtaaaaccagagacaCTGATCATTCTGCAGTGgtctctcaattttttccagagttgtataTAGCCATAACCTAGTCCCTTCAAAAAGTGTTAGCGAACGAACAATCCtagaaaggtttttttttttttttcgtggcTCTGAATTGACCTACGATAATCTGTAGTATAGttagggagagagatggagagattgaGACCTGGATAGTTCAATATGTCAACATGTGGCCTTTGGACAGAGGAAGATAAAATACCAGCTCCATTACTCAAGACTGTGTGCAAGACAACTTTTTGGAGTGTCACAGGCTGCTGTAAGACAAGTAGAGAAAGGCAGAGATTGGCTTTGAATGTACCCAGTGAGGTCTTTCAACTTGTATAGTTGTGCTTCACTTTTTTGATTGTTGAAAGACATCAACATAAACTTTTACAAATGTTCTGTATTAGTCAACAGGATCAGGCTGAGCAGTCATGTGCAATACTAATGCAACAGGAAAAAGCATGATatagaaatcattttaaagctACAGAAACTACAATATAAACAACCAGTCTGAATTTGCTCATATTTTCTGCACAAATATAACTAACGTTGTGGCCAGGGCAGCATTACCACAGTGTCTGAAGGACACAAAGACCTACACAGAGagggtctttttttatttatttaaggctGGCAGTTGGTCAGCCTTTGACTCCATTGTACagagcaagaaaaaaataaaacctaaacaaCCAATCTTCGCAGTGCCCTTCCACCTCTGCCTCACAAACTATGACACTGTGGTCTTTCTGACCAATCAATAGAGCATTTTCCCTTCTGATGCAGCTCAGCTGACACTTTGAACAGAAGCGCACACATTCCTGAGAACAAAGCCCAGATAGAAAATGTGGGcagttctgtttaaaaaaaaaaaaatacaaattcagatgAGGATTTGTCATTATGAATGGAATTGGCATTACTTTCTACATGTAGAAGACATTCAGgaaaaaagtcacaaaacaaattaaaacgtCACTGTTGATTTTCTTTAGCTTTGCCTGGCTTCTGTGATTTTTCAATGTGCGAGTTACTTGTGACCAGTATAATGTGCAAACTACTGATTagttagttatttatatataattgggtttttattgtgtatttccaTGTAGAGCTGCTAGCAATATAGGTTCTTTATCGCTATCTTTTTAAGCATGTTTTCCAACAAAAGAATTGGAAAAATCCCCAAAGAAGCTTGGAATTCACCATTTCTTAAAAAGTTTTGGTAATTGTTTACCcttttatgtacagtatttgaatatgaatgtttttttgatgcgttttattttttttaatcctgtgcACTGGAGAAGAGTAATGACTGCAGTGTTTAGTAAGGGAAATCGTGTCCTCTTTTTGCAAAGCTATAAGTATGAAGCTATCCTCAGTgggacagagagaaacaaaacattgttttttgctcaaaaacaattaattatttgactATTAatcatagaaacacacacattgtttattACATTGAGAAACTTACTATTATATACAAGAGATTAATGAAAAAGTAGTGCTTGGTGTCTGGTACCTCCACAGCCAGAAATGGGCTTAGGAATGGGCCAGTGCCTAGCAGTCTGTTAGATCTTCATGAAAATGGACATGCtagtaaacaaaagaaaactactGTCAATTGCGGAGGTTAAAGCTGATGGCAGATACTCAGGGATCCAATAACGTCAGAGCAAGCTGTGTAGCAGATTTCACATCTTTAGGATATTTCTGTAATACACTTAGTAACACGATTGGTTttagacaacaacaacagaaacacaatagGGCCCAACCAGAACGAGTTGGTGCAGTTTTCTCTTTAGTCCCATGCTGGAGTACATGAAAAGTGTTTCCAATGAGTTTGTTATACAGTGCCATCTGCTGGATTAACATTTAATGGCTTGTCTACCTGGTATAATTTTAGGTGCATTGACTTTGGCAGCTGTTATTTGTTCAAAGCTGGTGATATTTAATCAACCTAAAGTTGTTTTAGACGTTACAAAGCTTACACTTTGAATGACTTGATTATGTTGCATGTTAGTTATAGTTTTATAGTTATTCTCTTTGGTTATTTTCTAATCTTTTTAGATTTGTAGGGAGGATATGTTGAATCTTGACgcacaaatgtaattttaattgtaaatgttatgGTACATTGACCTGAAATATCTTGCAtcatattacattaataaatcaacTGAAACAATTGGCTTGAATTACTCTTTGGTCAAACATCTTTGTGCATAAACCTCAATTGAGGATTTCCTGTACTTGATATAACTGTGAGCACTATGTTGCTTCAAA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K01672 CA; carbonic anhydrase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007748 True 6643 mRNA 0.40 9 28647011 28674262

Neighbor

gene id symbol gene type direction distance location
AMCG00007749 man2c1,LOC107682572,LOC106596370 coding downstream 9705 28624088 ~ 28637306 (-)
AMCG00007750 NA coding downstream 34770 28595995 ~ 28612241 (-)
AMCG00007744 LOC107662462 coding downstream 65821 28579139 ~ 28581190 (-)
AMCG00007742 NA coding downstream 97465 28546752 ~ 28549546 (-)
AMCG00007743 NA coding downstream 143621 28454814 ~ 28503390 (-)
AMCG00007762 NA coding upstream 80218 28754480 ~ 28761777 (-)
AMCG00007758 NA coding upstream 103493 28777755 ~ 28843806 (-)
AMCG00007761 NA coding upstream 188316 28862578 ~ 28866585 (-)
AMCG00007760 dapk2a coding upstream 192342 28866604 ~ 28878017 (-)
AMCG00007759 cib2,LOC107757746,LOC107598895,LOC107698385,LOC107573330,LOC107752320 coding upstream 277357 28951619 ~ 28960104 (-)
G25768 NA non-coding downstream 979939 27662224 ~ 27667072 (-)
G25750 NA non-coding downstream 1082302 27564039 ~ 27564709 (-)
G25749 NA non-coding downstream 1083321 27563240 ~ 27563690 (-)
G25748 NA non-coding downstream 1083993 27562728 ~ 27563018 (-)
G25746 NA non-coding downstream 1092901 27553497 ~ 27554110 (-)
G25968 NA non-coding upstream 2578 28676840 ~ 28702537 (-)
G25972 NA non-coding upstream 22203 28696465 ~ 28699849 (-)
G25985 NA non-coding upstream 58502 28732764 ~ 28732994 (-)
G25987 NA non-coding upstream 59850 28734112 ~ 28734449 (-)
G26092 NA non-coding upstream 357148 29031410 ~ 29049165 (-)
AMCG00007704 NA other downstream 1276492 27357731 ~ 27370519 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other downstream 2576163 26053764 ~ 26070848 (-)
AMCG00007684 shf,LOC108430988 other downstream 3015419 25630792 ~ 25631592 (-)
G25422 NA other downstream 3382060 25264332 ~ 25264951 (-)
AMCG00007637 NA other downstream 4365447 24262690 ~ 24281564 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 220431 28894693 ~ 28921123 (-)
AMCG00007768 NA other upstream 326787 29001049 ~ 29013947 (-)
AMCG00007817 NA other upstream 2517748 31192010 ~ 31246649 (-)
AMCG00007822 NA other upstream 2664454 31338716 ~ 31342792 (-)
AMCG00007835 LOC107594750 other upstream 3130637 31804899 ~ 31816151 (-)

Expression


Co-expression Network