AMCG00007751


Basic Information

Item Value
gene id AMCG00007751
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 28723123 ~ 28729718 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007751
GTTTTCGGTAGGTTGTAATTTATTCTGAACATGCtcttgaaaacatttaacatgtGCGGTCTGAAACAATAGACAATCAGTTGGAAGACTTTTAATTGGTCCTGTACAAACATGATTCATAATTAACTTCAGAAAACATTACACAGCAGATTCAATTGTGTAcatgatatttacatttacatgggCCACCATTGCTGAATATTTCAAGTGCTAGAAACTCTTTTGTATTcctattataaaaaatatacttaaatgTTCTCAAGATGTGAGTAGCTACAAATTAGCTTATGGTGGTGTGTTGGCTTTAAAAACATAGGACTCCGCTGCATTTCCTTGTGTGTGGAGTCTCCCTTTCAGAAACACAGTCTGTTGGTTGAGTTACAGTAGACAGTTCCGCACCCAGGAGTCTGCAGCATGTTGGCCTTCTTCATGCAATATGTGTCTCTATAAATCAAGTGGCAGGGAAGCCATCTTCTCTATGATGGCTAGATGATAGAAATGCAGGGCTTAACTGATTGTGATTGTAGTATCATAAACATCTGTTATTCTACACAGATTTCTTAGAAGGATCCCATGCAGGCAGCGGGGAAGGCCGGTGTGGCTCACATTACCATTTTTGACTCGGCAGCTCCAGTTGTCGTCCCGAAATAAACACCATTCCACGGCCTTATATGTCCAGCAGCTCCCTCTGACTGATTGTAGGGGGAATCATGTATCCAAACAGCATGAATCAGCTCAGCAGCCTCATTGTTGCTCTCTATCAACAagctgtctctgtgtgtcaggagGTCTACTTCTGCTTGCCATGCACGTCACAGAGCTCAACAGGGAGTGCCTCATACACCTATTCTCCTACCTGGACAAGGACAGCCGCAAGAGTCTCTCGCTCACCTGCCGTCAGCTGAGGGATGTCTTCCTGGACTCGGCCCTCTGGCCTCTGCTCAACTTCCATTCGCCTTGCGAGCTGAGGAAGGACAACTTTGTGCTGGGCTCATCGCTGAGGTATCTGTCCATCTGCTGGCATTCGAGCCGGGTCAAAGTGTGCAACATCGAGGACTGGCTGAAAACCACATTCCAAAAGGATATCTGCAGGAAGCATGAGACTGTCGTCAGTGACTTCTTAGCCAAAGTTTGCATCAAGTGCCCCAATTTGCTGTCTTTGACGTTGTCTGGCTGTGGCCACATCGCAGACCGAGATGTGCTGCGTGTCCTGCAGAGCTGCGCAGGCCTGCGTTGCCTGCGTCTGGAGAACTGCGCGCGAATCACCGACGACGTGCTGCGTGGGGCGGCTGCCCACGGACACGGCCTGCGCAGCGTGCAGCTGGACTTCTGCCGTAACGTGAGCCGTGCAGGCCTGCAGCTGCTCAGAGACAGCCGCCCCGCCGTCCAGCTGAGCGCCGAGAGGAGTGCGGCCATGATCCCGGACAGCCAACCCCAGGAGAAAGCCAGCCTCACCAGAACCTTGCAGAAACTACTCCACTGTTCCTGAAGccatgcttttcattttctaaaaagGCAGATGAAGTAGACCAACAAGTTATTACAAGGGTGGCCAAATGTCCCGGTCCCCCTATGGAAGGATTTATTCTGCATTTGgtctcattttgtattttacttacaaattaatatttatacagatTTTTACAATTTCAAGTTTTGgtgattctgtgtgtgttttttatttctgtggtaATGGTCTGAGTGAAGTACATTACACCTCATTCCATTTATAGAGttatgacaataataataaaataacacccCTTGTTAATTCAAGTAGGTGACTGATAAAATACAACGATCCAGCTTCTCTCTTCCTGTAGCCCATGTTACATCTTGCTGTCCTATTGGGATTCCTAATATGATACTCCTTTGTGTGACACTGAGTCTAAAATGAAGATGGTCATCACTTCTGCTACTGCAGTTCCACCAGTCACAATTCTaggatttttaaaaaacaactaattgtGCCAGGCCTAACTGACTTGGGGAGGAACATGTGTCTAATACTTTCCCCATTAGTCCTTCATGCACCAGGAAGAAAGGGATATTGACCATATGGCACTGGAGCTTTACAATTATTAAAGTGTAAACACTGCACAGGGGAAGGCTTTCAAACTGACGAAAGACCAACTATCAATACTAATAAAGACATACGGGTAAATATGAAGAAGCTGTTGACGTGTTTAGCTGTGTCCATCGTTATGGTTATTCTTGGGAATACAGGTTGCTCCTTGTGTCACCTGCCCGCTGTTTATTCTTTTGTGTAATTATGTGTTTGCGTCTTTATTGAACATTCAAAGTGTCAGTTGCATTTGTGAGTATTGTGTCAAAAGTTTAGAGGCCACACAGAAAAGCACCCCCATCATGTGAAAAGTGAGGTCTGGAATTAGTAATTGAAGTACGTACGCATGTGTGAGTTTCATGAAGACGAATGGCACAGCAGCCAAGAAAGTAGCAGCACACCAGAGAATATTATATAACCATGTGTCGAAGTGTGTGCTACTCacaattcatgtttgtttttcctttgtgtacATGATACAAATATGTGGCCCATTCTAAGGTAACAGCCATGTCTATGACAGCACGTACAACACTCACGAAGCGCACAAACTGAACACACTGGTAGATGCATGCTGTTTCGTTTGACTTTTTAAGGCGGTTGAATTATGTTATCCACTTGACTTGCGTAATCCAGTTCATGGCGGACGTAAGGCAGAGTTAACGTCGCTGCTTTCCCTGCACAGCCCCGCGCAGGCAGCAGTGCGCAGCCGCTCTTCCGGGCTTTGCGGCAACAGTGACCTCATGTCGGGCAGCAGCACAGGTTCCCTGAGGACGCGCTGGCCCGGCGCCACGGTTGTGAATAGAAACACTTTATGTAAGAGAGCAGGATATGGAAATAGGCTGGAGAAGAGCTGCGCGCTACACGTGACTATGCTATATTTGCTGGATTGCATTAGACAGCTCCTGCAAACCGAGGGGCCTTTTGCACCGAGCAGACATAACATCAGTGCTCTACCACGAGTCACCGGTGAAGCAAGACTAATTTTAAGCCTCTCTCTTTTTCGCATGCTGAATGGCTGCTCCAAAAGTCATCCAGCTTATACAATGTGTTATTTGAATTGCGTAAGGTTTTGAAacagggggaggaggggggtatATGCGTGATCGTCAGGTGTGCAGTACATCACACGTGGTCCACACTAGTTTCTCTGTCGGCCTACGCGCTAAATGAATAGATAAGATCCAGGACAGTCATCGTTTTCACGTTGAATATCATCCATGTCCCGCAAGCCTCCTTCAACAGACACACATCACTCAGTGTAGACGCGACACAGGCACGACTTAATCCTGTAAGTGAGGTGAATATCTCAACACATCAACACgcacatgtatatatagatgtgcAAATTGTTCTGGGGGAATTTCATATGCagggatattttaaatgtgtttgtggtgGCCTGTAGGAGAAcctggagtgttttttttccccccttttctttaaatcagactagatttgttttttattatccCCCTTAAGCTCTGtgtaattatgattttaaatatgaaacccATTCAATTTGGACACATTGTTAGAGGCTAATTCATTAATTGAGTAGATGGTTGTGTGGGGTGCAAGGCCATAAGGTAGCGAAGTTAAATACTGACATCAGCATCAATGTGCTTGTTTATCCTTTGGAAGCTATTTTAagaaactgtaaatgtattgcaGTGGCATTCCTAACCATCTTCAAATTGGCCTTTATTTACTGATTCAAAAACAACGACATGATTTTATGCTACAGTATTGTTGTACAAATCATTTTGCAttagtatattaaaataaatcaatactacCTTCAAACCGCTTTACacttttttcttaaatacacatatttgttAAGGAAACTATAGCATGAGATGCATTCCAAAACATCAAACACTGACCCACACAGCAAATTGCAAAGTACAAGCCAGTACTTAGTTGGTTTACAAGGAGTAGAAGGCAGAAGCCATAGGTACACAAAATGTACTGAGGGTAGGTGTCTTTGCAATTCTTGATTATAGTTGGGGCATGTTTTGATCTGAGAGGGGCCAAGGTCAGGTCTTTCTAGAAAAGTTTTGATTATGGACTAAACAGTGGGCGCAGTGTGGATGCCATGTGAACACTAGTGTTAGCTCAAGCAACTTGGCACTGCATCAATCATTACTAAAGATTGTTACTTCGTCAAGACTCTTGTTCAAGAAATACTAAAAACGTCCACCCTGCATCTGCTTTGGATAGGAGACGGATTAACATTTATCTTCTGGAGACTCCAGCACAATCCCTGAAGCGGGAAACCCCTATCTCTGCAGCGCCAACACTACTACACCCAATTTACTATTGGCACTGTGTGTCTTGGGAGGGTTTTGGATTTGTTGCTGAGGTAACATTGCATCAACAGTATTGCTGCATATCTGTCTCTGCCCTGCACAGTTATTAAAGATCATG

Function

GO: NA

KEGG:

id description
K10288 FBXL22; F-box and leucine-rich repeat protein 22

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007751 True 4498 mRNA 0.44 2 28723123 28729718

Neighbor

gene id symbol gene type direction distance location
AMCG00007753 NA coding upstream 5788 28701981 ~ 28717335 (+)
AMCG00007745 aph1a,LOC103368490 coding upstream 77030 28637896 ~ 28646093 (+)
AMCG00007747 NA coding upstream 99133 28619421 ~ 28623990 (+)
AMCG00007746 commd4,LOC105008267 coding upstream 105725 28612614 ~ 28617398 (+)
AMCG00007741 NA coding upstream 146873 28551820 ~ 28576250 (+)
AMCG00007752 NA coding downstream 36997 28766715 ~ 28776364 (+)
AMCG00007756 NA coding downstream 203247 28932965 ~ 28936834 (+)
AMCG00007755 NA coding downstream 251105 28980823 ~ 28988913 (+)
AMCG00007767 idh3a,LOC107757767,LOC107659502,LOC103353692,LOC102780018 coding downstream 259995 28989713 ~ 29000085 (+)
AMCG00007765 NA coding downstream 295067 29024785 ~ 29032207 (+)
G25827 NA non-coding upstream 613533 28104602 ~ 28109590 (+)
G25819 NA non-coding upstream 645002 28070346 ~ 28078121 (+)
G25753 NA non-coding upstream 1151632 27570543 ~ 27571491 (+)
G25709 ppib,LOC102792920,LOC107680152,LOC107577199,LOC107754356,LOC107673286 non-coding upstream 1153770 27566695 ~ 27569353 (+)
G25699 NA non-coding upstream 1367046 27355874 ~ 27356077 (+)
G25984 NA non-coding downstream 1412 28731130 ~ 28731401 (+)
G26103 frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903 non-coding downstream 344738 29074456 ~ 29082381 (+)
G26146 NA non-coding downstream 581905 29311623 ~ 29311944 (+)
G26167 NA non-coding downstream 637655 29367373 ~ 29367723 (+)
G26171 NA non-coding downstream 644658 29374376 ~ 29375878 (+)
AMCG00007754 NA other upstream 23061 28682171 ~ 28700062 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other upstream 268416 28438644 ~ 28454707 (+)
G25822 NA other upstream 628382 28083822 ~ 28094741 (+)
AMCG00007640 NA other upstream 4223473 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 4528642 24192221 ~ 24194481 (+)
AMCG00007763 tbc1d2b other downstream 170340 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 273377 29003095 ~ 29006379 (+)
AMCG00007788 NA other downstream 892593 29622311 ~ 29724734 (+)
G26258 tpm1,tpma,LOC108237348 other downstream 1025322 29755040 ~ 29819552 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 2684436 31414154 ~ 31440378 (+)

Expression


Co-expression Network