AMCG00007752


Basic Information

Item Value
gene id AMCG00007752
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 28766715 ~ 28776364 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007752
ATGTCTACTTCAGATTCTGACTGTTCTATAGACTGGCTGGCCAGTGATGATGACAATGACAGTGTGTTTGAATCAGACTGTGACCGAGTGGGGGCTGGGAGGACGTTGCCCTTACCTCAGCGTTTGTGCCACACCGCTGACCCACAGGACCCCCGTACGACGCAGTCCAGCTGCATGCCGTCAGAAGCCAGGCGTAACAGTGGCCAGGAAGAGGGAAGCACCAGTCGGTGCGCGGACAGCGACGGGTCCAGTGAGGGAACCCTGTCCAGCTGCGAGGAGTCCTGGGGCCGGAGCCGAGACAGGCAGCCTCTCTCGGGGCGGCAGGAGGAGGCTGCTACCTCATGGTGCTCGTCTGCTGAGCAGTCTGGATGTTTACTGAGTGAGAAGCCAAAACATGCGCGGAAGAGGGAAAGGAGCTCGGGGGAGCTGGAGCACAGGGAAGGCGCACATGCTGGCGAATTGGAGAAAGATGAGATGTTTGCTCACAAGtgtATGGAGCTGCAGTGCTACATTCACCCACTGTCTGCAATCCTGAACGGCCTGCAGTCGGGGAGATACAGACAGCGTTTAAGCAGTTTCCAAGAGAGTGTTGCCATGGACAGGATTCAGAGAATAATGGGAGTTCTGCAGAACCCATCCATGGGGGAGCGATATATCAACATCATTCTGCAGGTGGAGGTAATGCTCAAGAACTGGTTCCCTAATGTGAAACCCAGAGACCAGCATCTAGGTGATAAGACTGAGGAAGCCGCTCCCTCGAAGAAGCTGAAGCTGTCTCCGGCCACTACAGCTCTCAATCTCCCAAAGGCGACCTCGGCCTCTCTTAATGTTCTTCCTTCAAGCAACAAAGCCCACAGAAACAATGACCTGCCTGTGACGGGCGCTTTTTCTGCCACTAACTTAAAATGGCTGCACACATCGCCCATCTGCACCCCCTCTGTGGAGCTGGCCCTGGGGCGCCTCAGACACAGAGCTGGGCCCAGAGAGAAAGACGTAATGCAGGACAATGTGGTGTCATCGAGCACAGACGTCCAGAGTGACGCAATTGCCACCCGCCCACCGCTAGGGAAGATAAATGCCCCCTGCCTGGAGAGACTGCTGAAATCCACCGAGAGCATCATCTCGCACAAAGGCACCAGGGGCACAAAGGAAACGAGCTGGTCTTAG

Function

GO: NA

KEGG:

id description
K21599 CIART, CHRONO, GM129; circadian-associated transcriptional repressor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007752 True 1167 mRNA 0.56 5 28766715 28776364

Neighbor

gene id symbol gene type direction distance location
AMCG00007751 NA coding upstream 36997 28723123 ~ 28729718 (+)
AMCG00007753 NA coding upstream 49380 28701981 ~ 28717335 (+)
AMCG00007745 aph1a,LOC103368490 coding upstream 120622 28637896 ~ 28646093 (+)
AMCG00007747 NA coding upstream 142725 28619421 ~ 28623990 (+)
AMCG00007746 commd4,LOC105008267 coding upstream 149317 28612614 ~ 28617398 (+)
AMCG00007756 NA coding downstream 156601 28932965 ~ 28936834 (+)
AMCG00007755 NA coding downstream 204459 28980823 ~ 28988913 (+)
AMCG00007767 idh3a,LOC107757767,LOC107659502,LOC103353692,LOC102780018 coding downstream 213349 28989713 ~ 29000085 (+)
AMCG00007765 NA coding downstream 248421 29024785 ~ 29032207 (+)
AMCG00007764 blm coding downstream 256390 29032754 ~ 29055451 (+)
G25984 NA non-coding upstream 35314 28731130 ~ 28731401 (+)
G25827 NA non-coding upstream 657125 28104602 ~ 28109590 (+)
G25819 NA non-coding upstream 688594 28070346 ~ 28078121 (+)
G25753 NA non-coding upstream 1195224 27570543 ~ 27571491 (+)
G25709 ppib,LOC102792920,LOC107680152,LOC107577199,LOC107754356,LOC107673286 non-coding upstream 1197362 27566695 ~ 27569353 (+)
G26103 frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903 non-coding downstream 298092 29074456 ~ 29082381 (+)
G26146 NA non-coding downstream 535259 29311623 ~ 29311944 (+)
G26167 NA non-coding downstream 591009 29367373 ~ 29367723 (+)
G26171 NA non-coding downstream 598012 29374376 ~ 29375878 (+)
G26196 LOC107575789 non-coding downstream 763319 29539683 ~ 29540062 (+)
AMCG00007754 NA other upstream 66653 28682171 ~ 28700062 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other upstream 312008 28438644 ~ 28454707 (+)
G25822 NA other upstream 671974 28083822 ~ 28094741 (+)
AMCG00007640 NA other upstream 4267065 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 4572234 24192221 ~ 24194481 (+)
AMCG00007763 tbc1d2b other downstream 123694 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 226731 29003095 ~ 29006379 (+)
AMCG00007788 NA other downstream 845947 29622311 ~ 29724734 (+)
G26258 tpm1,tpma,LOC108237348 other downstream 978676 29755040 ~ 29819552 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 2637790 31414154 ~ 31440378 (+)

Expression


Co-expression Network