AMCG00007755


Basic Information

Item Value
gene id AMCG00007755
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 28980823 ~ 28988913 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007755
CCATGCACTGTCTCCTTGACAATATCCTAGTAACCAAGGAGAGtacacacaaatgtattcaaatgacTTCCGGGTGTCTTTTTCGATAAatcattactttatttatttaatttgcgtttatttttttagatacaACTTcctaatttaatgtaaatattcgTCTTCACGGTGCAACTGAATAACCATTTACCTCTTCATGCATCGTATTTCATACAAAGAGAGGTTTATTAATTATAGGTAGCTAGGCAACTAGCAACAGATGAGAGACAGTTGAAATTGTGAAGTACAAAATGTACTGAAGATCTGATATTGCATGCCAAATTCGGAATATACAAGGATGGATGCCAAAAAAGACAAGGAGCACGAAACTGATTTTGCAAAAATCACGGCTGCACTGCTGAAATCTAAGACAGGGGAGTTTGATTTGGAGTCAATATTGTACCTGAAGCTCCGAGGTCTTGGTATATGTGACCTGGGATGTATAGGAGAATGCATAAACTTGGAAAGACTGGACCTTTCAGGAAATAATATCACAAGCCTAATTCCTCTCGCTTCCCTGAAATTACTTCTTGTGTTAAATTTGTCAGCAAACAGAATCACAAATTTAGAACCCATTTGCAACTGTGACAATCTGCAAAGCCTAAATGTGGCTGCCAACCTTATTAGCAGTGTTGAACACTTGCACTGTCTGCACTCCTTAAGAAAACTGGAAAGTATTCGTCTTAAGGACAACACATTTAGCTACAACAATCCAGtttgcaAGAACACATCATATAGAAATTTAATCCTAGAAATGTTCCCAAACATCAAGGTAGTGGATgGTGAAAGGGTGGTTGGCCGTGGCAGTGATTTATATCAGCTATGCAAAGACATTGATGAGTCTCtgaaagGATTTTATAAAAATGGTCCACTGCCAGATGTACCTGACTGCAAACCCTGGGTTGAAGAAGGTTTTTGGGATCTGAAGAGATCAAACAACGCTATAATTGAAGAGGCCTACAAACAATTTAATGATGTCCTACATGAATGCAGACTGCTGAACAACAGGGCTGCTCATGTGATAGCTCAGACTGAAAGAGCTCTGAGCATGAAGAATCAGCCAAAGCAGTACGTCCTATGAAAccctgagcagcatttcacttcaGTGCAGTAGTCCTTATAACTTCAAGCAAATCAGTGTATAACATATCCTTTTGCTTTACACAGCATCAATGCCAGTATCCTTACATGCCTATGATATGGCAAGGGTAGCCTAAAGACTTGTAACTATTTGTGAGTATTGCACATCAGTCctgtttacaaatattaaatgaaatcaaaGCAGACGCACACATGAAGCCCCTCCGTTTCATGAAGGTGCTGTTCAGATGTTCTCCGTATGCAATAAGCATACTTCATGATTTTTCATAAGTTATACTTAACATTATTGCTTCAGAAGGAATGATAGTCTACAGTGTAGAACAATATGCAATTTTACTCTTTTAATGGGGCttctagttaaaaaaaatgaaaaacaccttttttgtatttagtgatatgcacattgcattttatcacctttttaaatgttgctatTATTCACTATGGTTTTCAGGCTTTAAAAGGGAGTTACATATCAAATATTTTCTATATGCACAGGTTTCCAACATAGCGTGCCTGCGATTTGTTTAAATCGACAACAcatttatgaattaaaatgaCACTCAACATCCACACAAGTGTTGCTCATATCAttgtacatttgaaagaaagtTGAATgacaagaaaagcaaattatacATAGAGTAAATTCTACAAACCTTGACTTTAATTGCAGTTCTACAGTGTTTATCATGGAAACCCTGACCTTCCTACCTCATCCACACAATCTCTTTCGAGGGAAGTAGTTACTATTAGATACAACtctagctgttttttttaactgaattatAGGTTTGCTTCTTGCTTggaaataatgtatgttttataagtCAGATTTTTATGTAACAAAGgtgtttaaattatgttttctgttatCAATTCCCCCAaactggcattttattttaggattCTTTAGTCAAGCTGTGCTTAGTGGGACTATGTGGGCTGACAAAccacgttttttgttttgttttggcgaGGATaatttgtatgctttcatgTCTGCTTTAATAGAAAGTaactaatatatgtatttggggttaaaacttattttcaaatCTTGTATATTTGAGACTTTCTACTGTGGTGTCAAGCTTTCTAACACTGTTTAATACAGCAGGACAAATCAAGTGGTTAAGACCAAACTGATGCTGTTTATAACTACCTTTGATGACTGCCTTTTTCctcacattgtttttgttaggtACATGAAAAATAGAACCTCACAACAATACAAAACctaaaacaatgtaacaatatttCCTTAAGATTCACAGTTGTGTGACATAATGATGATAAAAGCAACAATGTGCTGCATATcagattgtgtatttttaaaaatgggatATTTAatgccaataaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007755 True 2507 mRNA 0.36 9 28980823 28988913

Neighbor

gene id symbol gene type direction distance location
AMCG00007756 NA coding upstream 43989 28932965 ~ 28936834 (+)
AMCG00007752 NA coding upstream 204459 28766715 ~ 28776364 (+)
AMCG00007751 NA coding upstream 251105 28723123 ~ 28729718 (+)
AMCG00007753 NA coding upstream 263488 28701981 ~ 28717335 (+)
AMCG00007745 aph1a,LOC103368490 coding upstream 334730 28637896 ~ 28646093 (+)
AMCG00007767 idh3a,LOC107757767,LOC107659502,LOC103353692,LOC102780018 coding downstream 800 28989713 ~ 29000085 (+)
AMCG00007765 NA coding downstream 35872 29024785 ~ 29032207 (+)
AMCG00007764 blm coding downstream 43841 29032754 ~ 29055451 (+)
AMCG00007766 NA coding downstream 70118 29059031 ~ 29071456 (+)
AMCG00007774 NA coding downstream 269517 29258430 ~ 29288693 (+)
G25984 NA non-coding upstream 249422 28731130 ~ 28731401 (+)
G25827 NA non-coding upstream 871233 28104602 ~ 28109590 (+)
G25819 NA non-coding upstream 902702 28070346 ~ 28078121 (+)
G25753 NA non-coding upstream 1409332 27570543 ~ 27571491 (+)
G25709 ppib,LOC102792920,LOC107680152,LOC107577199,LOC107754356,LOC107673286 non-coding upstream 1411470 27566695 ~ 27569353 (+)
G26103 frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903 non-coding downstream 85543 29074456 ~ 29082381 (+)
G26146 NA non-coding downstream 322710 29311623 ~ 29311944 (+)
G26167 NA non-coding downstream 378460 29367373 ~ 29367723 (+)
G26171 NA non-coding downstream 385463 29374376 ~ 29375878 (+)
G26196 LOC107575789 non-coding downstream 550770 29539683 ~ 29540062 (+)
AMCG00007763 tbc1d2b other upstream 69257 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 280761 28682171 ~ 28700062 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other upstream 526116 28438644 ~ 28454707 (+)
G25822 NA other upstream 886082 28083822 ~ 28094741 (+)
AMCG00007640 NA other upstream 4481173 24476487 ~ 24499650 (+)
AMCG00007769 acsbg1 other downstream 14182 29003095 ~ 29006379 (+)
AMCG00007788 NA other downstream 633398 29622311 ~ 29724734 (+)
G26258 tpm1,tpma,LOC108237348 other downstream 766127 29755040 ~ 29819552 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 2425241 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 4774600 33763513 ~ 33794941 (+)

Expression


Co-expression Network