AMCG00007756


Basic Information

Item Value
gene id AMCG00007756
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 28932965 ~ 28936834 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007756
GATCCAACCCGTGGGAAGATGGAGCGCAGGAAAGCGCCGGTCACCGGAGCAGAGTCGCAGGGGGAGAGCACTGAGGGCAGGCTGAGGGAGCTGGCTCTGAAGTGGTTCTCCGAGACACAGGCGCCACTCATTCTACACAATGGCAGCTTTCCAGACTGGTTTCAAGGATTCATCGCTAGAAAGGAAGCAGAAGATCAGCTCAGAGATAAGGAGCTGGGATGCTTTCTCATCCGACTCAGTGACAGAGCCATAGGGTACATCCTGTCCTACAAGGGGAGAGATCGCTGTCGACATTTTGTTATCAACCAGAATAAGGCTGGCCAATTCATTGTTTCGGGGGACACAGAGACGCATGATAACCTGACAGACTTGATAGAGTACTACAAGATCAGTCCCATCGAGCCCTTTGGAGAGTATCTCACATGTCCCTGCTCTGAGgcaGATAACCATGAACTGTATGATGAAATCCAGTTTGGTCAGAAGGGGAAACCTGTACTCAGTGTACAGGCTGTGAAGAGTATATGGAACCAGAGGAACGAAATGAGCTCTGAGGAGCCTCCTCCATTACCACCGAAAAGCAATAAGAAACTCCACAAGCTCTCTTCAGACTCTGCGTTTGAAAAAGCTGTTCCACTCGGCAAGGCACCACCAACACAGCACAAAAAAAGCCCATCTCTGAGAAATGCACTGAGCCGCTCACTGGAAGACAAAGGCACTGCGCACAGCCAAGTCCTGTACGCCCAGATCAACCAAAGTAAATTGGCAGATAAAACACAAGCTCCCACATCTAACAAAGAAACCCCAAACCGTCTGAAAGATCAACAGGGAGTCGGCAGTGTCCCCATCAAGAATGGGAGAAGGACGCCCAGCCCTCCTTCAAGCTGCATTTACTCCCAGGCACAGGAGCCCAAGACAGTCCAGAGCCAGGCCTCAGGGCCCAGGCCCAGTGACTCCACTGTGTACACCGAGCTCAGTCTGGTGGAATGCAGAAGTAAATCATTGCCGTTGCTTGATGACGGCTCCGATGACCATCATACCTACAGACTGTGCACCCCTCCACCCACCCCGGCCAAACTCTCGCCCACAATCCCCAGCAAATCCACCTACTATACCGTCCCCGAAACATACTCCCTTCAAGACCAGCATGCCACCTACAAGCTGCCTCCCAGTGTCACTCTTTGCAGTAGCAGCAGCCTGGACAAATTGTTTAACAATCCACTGTACCAGACAGTGACAAGAGTGTGTGCTTCACAGGACACAATGTCGGTGTCCTACAAAGAGCGAAGCAGCCACAAAGCCTTACGGGCCTCTTTCCCTCAAGCGCTGGATGAAGACCCCACCTATGCCCAAGTCCCCAATGAGACCATCTCCAACCACTTGTTTTCCGAAAACACCTACGAGCAGATTCCAGACAGGCATCACAAGATGAGCTCCGAGATGCAGCTAAACAACACGTATGAGACTATACCGGACAAGTCATCCAAGCAGTCTGAGTCTGTCTGGAGTCTAAAGaaTGACAAATGGCGAAGATTCTTTCCAGAATATAAAAAGAAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007756 True 1557 mRNA 0.51 6 28932965 28936834

Neighbor

gene id symbol gene type direction distance location
AMCG00007752 NA coding upstream 156601 28766715 ~ 28776364 (+)
AMCG00007751 NA coding upstream 203247 28723123 ~ 28729718 (+)
AMCG00007753 NA coding upstream 215630 28701981 ~ 28717335 (+)
AMCG00007745 aph1a,LOC103368490 coding upstream 286872 28637896 ~ 28646093 (+)
AMCG00007747 NA coding upstream 308975 28619421 ~ 28623990 (+)
AMCG00007755 NA coding downstream 43989 28980823 ~ 28988913 (+)
AMCG00007767 idh3a,LOC107757767,LOC107659502,LOC103353692,LOC102780018 coding downstream 52879 28989713 ~ 29000085 (+)
AMCG00007765 NA coding downstream 87951 29024785 ~ 29032207 (+)
AMCG00007764 blm coding downstream 95920 29032754 ~ 29055451 (+)
AMCG00007766 NA coding downstream 122197 29059031 ~ 29071456 (+)
G25984 NA non-coding upstream 201564 28731130 ~ 28731401 (+)
G25827 NA non-coding upstream 823375 28104602 ~ 28109590 (+)
G25819 NA non-coding upstream 854844 28070346 ~ 28078121 (+)
G25753 NA non-coding upstream 1361474 27570543 ~ 27571491 (+)
G25709 ppib,LOC102792920,LOC107680152,LOC107577199,LOC107754356,LOC107673286 non-coding upstream 1363612 27566695 ~ 27569353 (+)
G26103 frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903 non-coding downstream 137622 29074456 ~ 29082381 (+)
G26146 NA non-coding downstream 374789 29311623 ~ 29311944 (+)
G26167 NA non-coding downstream 430539 29367373 ~ 29367723 (+)
G26171 NA non-coding downstream 437542 29374376 ~ 29375878 (+)
G26196 LOC107575789 non-coding downstream 602849 29539683 ~ 29540062 (+)
AMCG00007763 tbc1d2b other upstream 21399 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 232903 28682171 ~ 28700062 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other upstream 478258 28438644 ~ 28454707 (+)
G25822 NA other upstream 838224 28083822 ~ 28094741 (+)
AMCG00007640 NA other upstream 4433315 24476487 ~ 24499650 (+)
AMCG00007769 acsbg1 other downstream 66261 29003095 ~ 29006379 (+)
AMCG00007788 NA other downstream 685477 29622311 ~ 29724734 (+)
G26258 tpm1,tpma,LOC108237348 other downstream 818206 29755040 ~ 29819552 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 2477320 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 4826679 33763513 ~ 33794941 (+)

Expression


Co-expression Network