AMCG00007760 (dapk2a)


Basic Information

Item Value
gene id AMCG00007760
gene name dapk2a
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 28866604 ~ 28878017 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007760
ATGTTTAATCCCACGTTGTCCAAGTGCTGCGTGGAGAAGAGTTCTGGCCAGGAGTATGCGGCCAAGTTCATCAAGAAACGGCAGAGCCGGGGCAGCCGGCGGGGGGTACGGCGCGAGGAGATCGAGCGAGAGGTCAGCATCCTGCAGCAGACCCAGCATCCCAACATCGTCACGCTGCACGACGTCTTTGAGAACCGTACAGATGTGGTGCTCATCCTGGAGCTGGTATCTGGAGGGGAGCTGTTTGATTTTCTAGCACAGAAAGAGTCTCTGAGTGAAGAAGAAGCAACACAGTTTATAAAGCAGATCCTTGATGGAGTCCACTATCTTCACTCCAGGAAAATTGCACACTTTGATCTCAAGCCAGAAAACATAATGCTGCTGGACAAAAATGTCCCTTTACCACGGATCAAACTGATTGACTTTGGCCTTGCTCACAAAATTGAAGATGGAGTggagtttaaaaacatttttggaacTCCAGAATTTGTTGCTCCAGAGATAGTGAACTATGAGCCTTTGGGACTGGCAGCAGACATGTGGAGTATAGGAGTCATCACCTATATTCTgttAAGCGGGGCCTCCCCTTTTCTGGGTGAGTCAAAACAAGAGACCCTGGCAAACATCTCAGGAATGAATTATGATTTTGATGAGGAGTTTTTCAGCCGCACCAGTGAGCTGGCCAAAAGTTTCATTAGTCAGTTGCTAGAAAAAGATACAAGGAAAAGACTGACTATTCAAGATGCTCTGAATCACCCATGGATCAAGTCCCATGAGCACAAGGAGGAAACTAAAGCCCCTGAGACCAAGAGGCCTGAGCGCAGGCAGCTCAAGACCAAGCGTTTGAAAGAGTACACCATGAAGTCCCACTCCAGCATGCCTCCTAACAACACCTATGTCAACTTTGAGCGCTTTGCCCGTGTGGTGGAGGATCTCTCGGCCATGGAGACCTGCTTCAGTGGCATCACAGTGGTCCACGACGCCCTGCAGGAGGACATCGATGCCCTCGTCTCGATTTACAATGAGAAGGAGTCCTGGTACAAGGAGGAGAGTGAGAGCGTGAGGCATGAGCTCTCCCAGATCCGCTATGAGTACCGCAAAGTGGAGTCCATGAAGAAGCACCTGCAAGATGACATGAAGACAGTGGGCTCCAACCTCAGCAGCATCAGTGGGCGGTACCTGGAGAGGAGGTGTCATTTTGAGGCTCTGAGTCAGGAGGTCTCCACGGAGCTGAAGTGGGTCCAGGATGTTATGAGCTCCTTTCAGCTGGACAGTGGCAATGGAGGCTTCACTAACGGTGGCTTCTCATCTGTCTTCAATAACGACGTCAACGAGGCTTTGAAAGAGCTCCTCAACGGCTCCTGTGGTGGAGATctgctttcagaaataaatcTCAACAGGAGAGAGTCCAGGCAGCAGTATTAAACTGAATCAAAAAGGATACAGGCCCCTGTCTTTCTATTGTCTTGTTGATTTAACATCCTGTTTTAAGGCATCTTTGCACATCCAAAGTAAACTGAAATGTCCTGTTTATGCCAAAGCATTGACCAAGTTGTTTGACCTTGCTCTTGCTTGTAAATTCATTCAAGGAGTTGATGCTGcacaatacagtataattaattacacaaaaaatacattaactgttAATATGTGAAATCTTAAGTGTATACTTTGGTTTATGTGTACAAGctcagaataagtatttttcaatTCAGTGTCAAGATCAACGTTGATAATCCTTTGCTAAAAAGTGCATGtggtatctttttttttttcagaagacAAGCAATTTTTCTGAAATGATCTAGAGATATTGAATAGTTTATTTCTTAACTTATTTATATTGTCcactttgttttccacatgATGAAAAATGTCTCcgtaatttagtttttgttcacTTAATCAAAGAGTAGTCATCATTATCAGTATACTCCCATTAAAACTTAAAAGCAGTACCAGAACTTTAACAGAcagataaacacaaaacacaagtgCTGAAACCCTGAACTACACCGAAACATCTGTGAAGTTAAAGTTGTGATTGGATCATCATGTTATCTGTGctatcttttaattttaaatatacacaagcaaaccaacatttattttcttgtaacgCAATCACCTCTTATCACATTACCACAATACCAGGGAGAACAGACAGACGTTATTTTAGTTCCTTTCATTTGAGCTAAACAGGAAGTTACTACACTCCTGCTCTCCAGCGTGCCAGTATACATACTGCTTCCATTCCATTTGAAAAGACTTCTATAAGACCTTGTCATTGTTGCTGACATGTCCACTTGACATTGTAGGAGTACAGTGTTTCAAGTCCAAGCAATAGTGTTGCCAATTTGTTGGTGTGTTTAAGTATATCTGATAAGACTTAGCACGTATAGCtcttttaagaaaatacagtaCCTGTACCTACACAATATCTTTAtcttatgttgttttatttttatatattttagaaggatatttgataaataaataaataaataaataaataaataaagcatgccATGCCTTTTGTTGtgcacttttttaaatgcacaacaaaGGTTACTAGAAAACATAGTTAAAACTTAAGCTATGTCATACATTAGATCCCTCATGTTGAGTACACCGAGTCTTATGTGACGCAATCGCCTTTGATTCAGTTTATGAGTGATGAAAGACAATTTGTGCTGTAACAGTAATgtcctttaatgaaaataaacaaaccaaccatCCAGGAAACTAACAAACAGACAAGAAACATGCAGTGCACATGCTCAGTGCAGCTTTTGTgatatgtatctatttattttaaagaaacgaGGAAATGTATAATGAAGGTTGTACCAGTTGCCTGAATTGTTTTCAGATGTGTTCACTTGGATTTACtttctgtgtgttctgtgtatttgaacacattaatatatatattacagccTGTTCATTACTCTGTTGAATCTTAATGTGTGTTCTGCTGCTGCTAAAGCCAAGTTAATCAGAGACTTGTATAGATAGTCTATGCATTTTTTGCTTTGTCTCATTTGCAAACTGAAAAACCACAACCCTTAACCCATCATACCTTATAAAGTACACTTGAACTGATCCCTGTTGACTTCTATGTGTTTTTGGAGTATTTCACTATTTCTGTGCAGTCAGAATTTTATGAGCATCCACAATTAGAAGACAGACATCATTATTTCATCACGCTGTCAAGCACAAACGTGATGAGGCTGAATAGTCAGTACAtaaagtacattatacattattcagAGGACATGAGCATTGCGTTCCTTTGAAgggtaatgtttttttccctaatAAGGTGGGGAGGTTTATTACACCC

Function

symbol description
dapk2a Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and positive regulation of apoptotic process. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human DAPK2 (death associated protein kinase 2).

NR:

description
LOC571352 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007760 True 3346 mRNA 0.41 9 28866604 28878017

Neighbor

gene id symbol gene type direction distance location
AMCG00007761 NA coding downstream 19 28862578 ~ 28866585 (-)
AMCG00007758 NA coding downstream 22798 28777755 ~ 28843806 (-)
AMCG00007762 NA coding downstream 104827 28754480 ~ 28761777 (-)
AMCG00007748 NA coding downstream 192342 28647011 ~ 28674262 (-)
AMCG00007749 man2c1,LOC107682572,LOC106596370 coding downstream 229298 28624088 ~ 28637306 (-)
AMCG00007759 cib2,LOC107757746,LOC107598895,LOC107698385,LOC107573330,LOC107752320 coding upstream 73602 28951619 ~ 28960104 (-)
AMCG00007770 frmd5,LOC108435336,LOC102299895 coding upstream 202134 29080151 ~ 29100489 (-)
AMCG00007771 frmd5,LOC108435336,LOC107562133 coding upstream 236363 29114380 ~ 29122313 (-)
AMCG00007772 NA coding upstream 355742 29233759 ~ 29256619 (-)
AMCG00007779 NA coding upstream 411052 29289069 ~ 29296557 (-)
G25987 NA non-coding downstream 132155 28734112 ~ 28734449 (-)
G25985 NA non-coding downstream 133610 28732764 ~ 28732994 (-)
G25968 NA non-coding downstream 164067 28676840 ~ 28702537 (-)
G25972 NA non-coding downstream 166755 28696465 ~ 28699849 (-)
G25768 NA non-coding downstream 1199532 27662224 ~ 27667072 (-)
G26092 NA non-coding upstream 153393 29031410 ~ 29049165 (-)
G26115 NA non-coding upstream 352926 29230943 ~ 29232708 (-)
G26147 NA non-coding upstream 433601 29311618 ~ 29311943 (-)
G26165 NA non-coding upstream 487607 29365624 ~ 29366245 (-)
G26231 NA non-coding upstream 730300 29608317 ~ 29608596 (-)
AMCG00007704 NA other downstream 1496085 27357731 ~ 27370519 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other downstream 2795756 26053764 ~ 26070848 (-)
AMCG00007684 shf,LOC108430988 other downstream 3235012 25630792 ~ 25631592 (-)
G25422 NA other downstream 3601653 25264332 ~ 25264951 (-)
AMCG00007637 NA other downstream 4585040 24262690 ~ 24281564 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 16676 28894693 ~ 28921123 (-)
AMCG00007768 NA other upstream 123032 29001049 ~ 29013947 (-)
AMCG00007817 NA other upstream 2313993 31192010 ~ 31246649 (-)
AMCG00007822 NA other upstream 2460699 31338716 ~ 31342792 (-)
AMCG00007835 LOC107594750 other upstream 2926882 31804899 ~ 31816151 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_024150 dapk2b coding NC_007136.7 CM002909.2 26441054 ~ 26604529 (+)
grasscarp (Ctenopharyngodon idella) CI01000330_03852880_03865462 DAPK2 coding CI01000330 null 3852880 ~ 3865853 (+)