AMCG00007762


Basic Information

Item Value
gene id AMCG00007762
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 28754480 ~ 28761777 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007762
GGCGGCGCGCGCTCTTTGTTCACGGGAGCGAACTTTCTCCCGCGATGCGTTAGAGCTGACACCACTCGCACCTTTATCAATAAACACCCCAAGGACTTCATCGATTAACGTGATGTGTTCACGTTGCCCTGGGCTTCCCAATTGAAAGACAACGTAACGCATGCATGTTTATAGTGGCATACGCATGACAATTGTTCCTAAACTGCAGGCTGCTCTAAGTGGTGCACGGGGGGAGAGCATAgttgaagaaaatacattttaaaaaggacgCGCAGTTCGGACGCACATATGATgccacttaaaaaacaacaacaacaacaacaacaaccacaaaaacgTTTAAAGGTGTCGGTTCAAGACCAGGATGTCCGGCACTCGCACAGCAGATCAGTCTTGTTCCACTATCTGCCTACTCTATGTactGCAGATCCCtcttcacattttcaaaattgtagTGGTTGCTGAAGGGCCTGTGGTCTTTGGATGTCAGGAATTAGAGCAGACGCAGAAGTCAGTCACATGTGCTATATTCCAAGGAAAATTAGCCCTGCCCTTTTTTCCACTGACTGTTCACATGGAGAGAGTGCTGCCTGCCTGGCAGAGAATCACAATTGAATCCTTAATGGCAGTGTGTAAACGTCTGAAAAGCTGCCAGTACAATTCAAGTGACACTGGGATATCTAGCTCCAGGGCTGAATGCAACATGTGA

Function

GO:

id name namespace
GO:0051301 cell division biological_process

KEGG:

id description
ko04110 Cell cycle
ko04113 Meiosis - yeast
ko04114 Oocyte meiosis
ko04914 Progesterone-mediated oocyte maturation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007762 True 709 mRNA 0.47 4 28754480 28761777

Neighbor

gene id symbol gene type direction distance location
AMCG00007748 NA coding downstream 80218 28647011 ~ 28674262 (-)
AMCG00007749 man2c1,LOC107682572,LOC106596370 coding downstream 117174 28624088 ~ 28637306 (-)
AMCG00007750 NA coding downstream 142239 28595995 ~ 28612241 (-)
AMCG00007744 LOC107662462 coding downstream 173290 28579139 ~ 28581190 (-)
AMCG00007742 NA coding downstream 204934 28546752 ~ 28549546 (-)
AMCG00007758 NA coding upstream 15978 28777755 ~ 28843806 (-)
AMCG00007761 NA coding upstream 100801 28862578 ~ 28866585 (-)
AMCG00007760 dapk2a coding upstream 104827 28866604 ~ 28878017 (-)
AMCG00007759 cib2,LOC107757746,LOC107598895,LOC107698385,LOC107573330,LOC107752320 coding upstream 189842 28951619 ~ 28960104 (-)
AMCG00007770 frmd5,LOC108435336,LOC102299895 coding upstream 318374 29080151 ~ 29100489 (-)
G25987 NA non-coding downstream 20031 28734112 ~ 28734449 (-)
G25985 NA non-coding downstream 21486 28732764 ~ 28732994 (-)
G25968 NA non-coding downstream 51943 28676840 ~ 28702537 (-)
G25972 NA non-coding downstream 54631 28696465 ~ 28699849 (-)
G25768 NA non-coding downstream 1087408 27662224 ~ 27667072 (-)
G26092 NA non-coding upstream 269633 29031410 ~ 29049165 (-)
G26115 NA non-coding upstream 469166 29230943 ~ 29232708 (-)
G26147 NA non-coding upstream 549841 29311618 ~ 29311943 (-)
G26165 NA non-coding upstream 603847 29365624 ~ 29366245 (-)
G26231 NA non-coding upstream 846540 29608317 ~ 29608596 (-)
AMCG00007704 NA other downstream 1383961 27357731 ~ 27370519 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other downstream 2683632 26053764 ~ 26070848 (-)
AMCG00007684 shf,LOC108430988 other downstream 3122888 25630792 ~ 25631592 (-)
G25422 NA other downstream 3489529 25264332 ~ 25264951 (-)
AMCG00007637 NA other downstream 4472916 24262690 ~ 24281564 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 132916 28894693 ~ 28921123 (-)
AMCG00007768 NA other upstream 239272 29001049 ~ 29013947 (-)
AMCG00007817 NA other upstream 2430233 31192010 ~ 31246649 (-)
AMCG00007822 NA other upstream 2576939 31338716 ~ 31342792 (-)
AMCG00007835 LOC107594750 other upstream 3043122 31804899 ~ 31816151 (-)

Expression


Co-expression Network