AMCG00007766


Basic Information

Item Value
gene id AMCG00007766
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29059031 ~ 29071456 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007766
cattggtggagcagcgcagatctgaaCCAATTGTCAACTAAGTGACGTCAAAGGTTGACCAATCAGCGACCAAGAGTCCTAAATTACGGAAGAGTTACAAAACAGCTCGGGAAGCGGGGCTTGCGTGGTCTGCACACGTTGCTGTAGGGCAGGCCGGAGCAGTCGCCTGTGTGCTCAGTGGAAGCAGATTGCAAAGAGCGGTATCTCACAATGCCAACCAGCGGCGAGGATACAGATGGATACCTCAGTCTGATTAATATTCGTCTTCCTTTTGTTAAATTGAAGCGCATACAGGAGTTGACCCCCACACCGGACCGGTCTGTAGCAGAGATGCTAAGCAGGTCTGCTCATGATACAGAAGCTTCTGAAAAAGAGAGGGCGGTGTCTCTGCCCGAGGGTCTGCACCCCAAACAGCTGGTATACAGGTCTCCAAACATGGAGGCTGCTGTGCCCAGACGAGGCATCAAAAGAAAGGCTCCTCCTGGTACTTTGTCCTTGTATGAATTTAAGCGCTTGAAGAACATCAGACAAAACCAAGAATTTCTCTCATCAATGAACATTAAAGAGacTACTGCcgctttgaaaaataaacctgcCCGGCCACCTGTGAAGAAgTACAAGTCAGTCCTCAGCAGCATGAGTCTGACTGAAACCCGTGTGGTCAAGGTTGTGAAGGAGCGTGTGGTATCCATGGCCATCCACCCCTGTACCAGCAGGCTGCTGACCGCTGTGGGGGACAAGTGGGGACAACACAGGGACCCTGATGAGGGGGTGCTCCAGTTCCTGCCCCACTCTCGCGCTGCCTGCTGCCTGGACTTCTCCACCTCTAACCCGGCTCACCTGCTCTCTGTCAGTTACGATGGCACTATGCGTGCTGCTGACATCAATAAAGCAGTCTTTGATGAGGACATCCCATAAGTCCAGGTCCACACTTCACTCCAAGACTGTCAGGACAGTCCACATGCACCCTGTTAACAGGCAGTATTTTGTGGCAGCAGGGAAGGGtaatGTGTACATTTACGATGTCCGGCGCCTTAAGCCAAAAGGGACTGAGGCAGTGTGTTCCCTGCCGGGTCACCGCTCAAGTGTTACTTCGGCCTATTTCTCCCCCAGCAGCGGACACAGAGTGGTGACCACCTGCTCGGACCACATGATCCGAGTATTCGATACTTCTACATGCAAGGGCGAGGCTCCCCTCCTAAATTCGATAAAACACATGAACACAGGCCACTGGCTTACCAAGCTGTGTGCCGTGTGGGATCCCCAGCAGGAGGACTGCTTTGTGGTGGGCAGCATGGAGCGGCCACGGAGGATGGTGGTGTTCCACGAGAGCGGCCAGATGGTGCACAACTTCTGGGATGAGCAGTGGCTGGGCTCTGTTTGCTCGGTCGCGGCCTTCCACCCTAGCAGGAACATCCTCGTGGGGGCCAACTCTAGTGGCCGCCTGCACGTCTTCATGAACTGAGAGCCAGAGTGGCCCAGCCAGCACAGCTGTCCCACACTGACTGTATCGCACTGCTTCATTTGATCTGTTTATTTGCTGTTATTAATGTTGTCTTTCATCtacaatgagaaaaatattttatttgtttttgttgtgtgtgctAAGTGCTCTGATAAGTTTCCATTAGATGCtgctaaataaatgtgattggtttagatttttttgattatttttaaatgtattcaactgAGAGATATAAGTAGAGcattatgcttttaaatacagaatCAATTTCAGTCTATATggcacaatattttaaaagatcagTTTCAGTGAACGGCTTTTGgctttttgctttttgcaaGACACCAAGCAACATGAAGGGATGCTGCCATTGAATTCTCCTGGATGTGGTTTTATGTATCGCAAGTACTTGCATGCTTTGCATGCTTTCAACTTGGGAGGGAAGTTTTGTTCGCTATTGTTTTGTGGTCAATAATGGTTTTGCATTATTTCCGAGAACAATAACGCAAAAATGATCTGTTCACTCTGAATTGAACGGTCTATTTTCGCTGTCTACTTTGCGTTGTTTAGATGTACTCATTGGGTTATTGGAACTCTTCAGATAGACTGCAGGTGACTGAAAGTGTGTAAACTTAATCCTTATTTTTCTCTCAGCttgaattttttatttatttttcctgatgGAGTGTGGATGTGGTTGTGATGAGTTGTTTGCTAATGGAAAAAATAGAACTTTTATCCTGTTTTATGAGTTCTTAttctgtattgcattttattttttgtaatttcactttGCAATATGCAGAGAATCCG

Function

GO: NA

KEGG:

id description
K24755 WDR76, CMR1; WD repeat-containing protein 76

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007766 True 2281 mRNA 0.47 10 29059031 29071456

Neighbor

gene id symbol gene type direction distance location
AMCG00007764 blm coding upstream 3580 29032754 ~ 29055451 (+)
AMCG00007765 NA coding upstream 26824 29024785 ~ 29032207 (+)
AMCG00007767 idh3a,LOC107757767,LOC107659502,LOC103353692,LOC102780018 coding upstream 58946 28989713 ~ 29000085 (+)
AMCG00007755 NA coding upstream 70118 28980823 ~ 28988913 (+)
AMCG00007756 NA coding upstream 122197 28932965 ~ 28936834 (+)
AMCG00007774 NA coding downstream 186974 29258430 ~ 29288693 (+)
AMCG00007775 NA coding downstream 249775 29321231 ~ 29336890 (+)
AMCG00007773 sec11a,LOC107691153 coding downstream 268190 29339646 ~ 29342580 (+)
AMCG00007776 NA coding downstream 279614 29351070 ~ 29351882 (+)
AMCG00007777 kti12,LOC107562123,LOC107715238,LOC107725737 coding downstream 283595 29355051 ~ 29361487 (+)
G25984 NA non-coding upstream 327630 28731130 ~ 28731401 (+)
G25827 NA non-coding upstream 949441 28104602 ~ 28109590 (+)
G25819 NA non-coding upstream 980910 28070346 ~ 28078121 (+)
G25753 NA non-coding upstream 1487540 27570543 ~ 27571491 (+)
G25709 ppib,LOC102792920,LOC107680152,LOC107577199,LOC107754356,LOC107673286 non-coding upstream 1489678 27566695 ~ 27569353 (+)
G26103 frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903 non-coding downstream 3000 29074456 ~ 29082381 (+)
G26146 NA non-coding downstream 240167 29311623 ~ 29311944 (+)
G26167 NA non-coding downstream 295917 29367373 ~ 29367723 (+)
G26171 NA non-coding downstream 302920 29374376 ~ 29375878 (+)
G26196 LOC107575789 non-coding downstream 468227 29539683 ~ 29540062 (+)
AMCG00007769 acsbg1 other upstream 52652 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 147465 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 358969 28682171 ~ 28700062 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other upstream 604324 28438644 ~ 28454707 (+)
G25822 NA other upstream 964290 28083822 ~ 28094741 (+)
AMCG00007788 NA other downstream 550855 29622311 ~ 29724734 (+)
G26258 tpm1,tpma,LOC108237348 other downstream 683584 29755040 ~ 29819552 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 2342698 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 4692057 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 6539526 35610982 ~ 35620801 (+)

Expression


Co-expression Network