AMCG00007769 (acsbg1)


Basic Information

Item Value
gene id AMCG00007769
gene name acsbg1
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29003095 ~ 29006379 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007769
ATGGGCTACCTGAACATGGAGGACAGGACCGCAGAGTCTCTGGACGAGTATGGGTGGCTGTGCTCAGGGGATTTAGGGAAGACTGACAACGATGGATTTCTTTACATCACAGGACGGATCAAAGGCCTCGTACAGCAGAATGTTGAGTCCCAGAAAGAACTCCAGAGTCTCGCTGGTGATGGGAGCTGCCCCTGA
>TU32711
cgggtacacaatattaggcagatgttatggctgatcggtgtatggtTAATAAAAGCATCAGTCTGTTTCAGTGCTCTTCCTTTGATTCCTTATAGCTGTGGAAAGGTGGTTCCTGGCTGCAAGTTCAAACTGAAAGACAAAGAAGAGGAAGGCAATGGAGAAGTGTGCTTCTGGGGGAGGAACGTGTTCATGGGCTACCTGAACATGGAGGACAGGACCGCAGAGTCTCTGGACGAGTATGGGTGGCTGTGCTCAGGGGATTTAGGGAAGACTGACAACGATGGATTTCTTTACATCACAGGACGGATCAAAGAATTAATTATTACAGCCGGCGGTGAAAATGTCCCTCCAGTGCCAATTGAGGATTCTGTGAAAAAGGAACTTCCTATTATTAGCAATGCCATGCTGATTGGGGACAAAAGGAAATTCTTGTCAATGCTGCTTACTTTAAAG

Function

symbol description
acsbg1 Predicted to enable long-chain fatty acid-CoA ligase activity. Predicted to be involved in long-chain fatty acid biosynthetic process. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in adrenoleukodystrophy. Orthologous to human ACSBG1 (acyl-CoA synthetase bubblegum family member 1).

NR:

description
PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007769 False 195 mRNA 0.53 2 29003284 29006379
TU32711 True 453 TUCP 0.45 2 29003095 29003773

Neighbor

gene id symbol gene type direction distance location
AMCG00007767 idh3a,LOC107757767,LOC107659502,LOC103353692,LOC102780018 coding upstream 3010 28989713 ~ 29000085 (+)
AMCG00007755 NA coding upstream 14182 28980823 ~ 28988913 (+)
AMCG00007756 NA coding upstream 66261 28932965 ~ 28936834 (+)
AMCG00007752 NA coding upstream 226731 28766715 ~ 28776364 (+)
AMCG00007751 NA coding upstream 273377 28723123 ~ 28729718 (+)
AMCG00007765 NA coding downstream 18406 29024785 ~ 29032207 (+)
AMCG00007764 blm coding downstream 26375 29032754 ~ 29055451 (+)
AMCG00007766 NA coding downstream 52652 29059031 ~ 29071456 (+)
AMCG00007774 NA coding downstream 252051 29258430 ~ 29288693 (+)
AMCG00007775 NA coding downstream 314852 29321231 ~ 29336890 (+)
G25984 NA non-coding upstream 271694 28731130 ~ 28731401 (+)
G25827 NA non-coding upstream 893505 28104602 ~ 28109590 (+)
G25819 NA non-coding upstream 924974 28070346 ~ 28078121 (+)
G25753 NA non-coding upstream 1431604 27570543 ~ 27571491 (+)
G25709 ppib,LOC102792920,LOC107680152,LOC107577199,LOC107754356,LOC107673286 non-coding upstream 1433742 27566695 ~ 27569353 (+)
G26103 frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903 non-coding downstream 68077 29074456 ~ 29082381 (+)
G26146 NA non-coding downstream 305244 29311623 ~ 29311944 (+)
G26167 NA non-coding downstream 360994 29367373 ~ 29367723 (+)
G26171 NA non-coding downstream 367997 29374376 ~ 29375878 (+)
G26196 LOC107575789 non-coding downstream 533304 29539683 ~ 29540062 (+)
AMCG00007763 tbc1d2b other upstream 91529 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 303033 28682171 ~ 28700062 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other upstream 548388 28438644 ~ 28454707 (+)
G25822 NA other upstream 908354 28083822 ~ 28094741 (+)
AMCG00007640 NA other upstream 4503445 24476487 ~ 24499650 (+)
AMCG00007788 NA other downstream 615932 29622311 ~ 29724734 (+)
G26258 tpm1,tpma,LOC108237348 other downstream 748661 29755040 ~ 29819552 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 2407775 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 4757134 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 6604603 35610982 ~ 35620801 (+)

Expression


Co-expression Network