AMCG00007772


Basic Information

Item Value
gene id AMCG00007772
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29233759 ~ 29256619 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007772
GGAAAAGTGGCTTTTTCGTGAACTCAAAACATGAGCGACGCCGctctgtgtctgcctgtctgggATTAAGGGGGCGATGCACAGCTGGGGGAGGATTTTAATGTCAGGTGAATCCGCGctccttttgtgttttgatttgtgatCACGGTACACGTTTGCTTTTAAAACGTCTTCTTTCGTGTTGCAGCAGAGCTTTCCAGAACACCTCCAGCTGCGTTTGAGCGTGAACTTTTATACAGTAACTGGAAAGAAATCTGCTGGCTCATATAACTACACCACGGTTTTCCTGCACTGCAGAAACTCAATGGAAGATACTACACTTTGTCAAGGACCTCCCTATTTAGATATTGTAATAACACAACATCCAGTGTCTGCGAGTGTCCCACTGAATTACACTCTCACTCTGAGTTGCCGAGCAATAGGCTCCAGCACCCTACAATATCAGTGGTTCCAGTCAGAAAATGAAGAGgtTCCTGGTGGTAATCTGCCAGATTTGGTCATTGCTGCCAAGAAAACCCAAGTTTACATATGCAGGGTGAATGATCAGTACAGTAACTGTGTGTTTAGTGAATGGGTTAAAGTCAAAGTCTGGGATATTTTAAGACCAGCGGTTCCTGTGACATGGACTGGAGAGCCACAGATTGTGGTGCACCCTGGTTCCCTCACTGTCAAGCATGGTGAGGAACTCAAGCTACAGTGCACTGCCTTTGGAATCCCTGCTCCACACTATCAGTGGTATAAGAATGGCATCCCAGTTCAGGGGGAGACTAAAGAATTATTGATGATCAAGAATGCAGATAAGGATCACAATGGAACATACCTCTGTTCCGTTTCAAATGTCCTGGAAGAGACATGGACCGAGCCAGCTGATGTTAATATAGTGTTTCCTGATAAAGCCACAGCAAAGAGATATTATGCGACTGACAAAGTGGCCATTCTGATTGGCAATCTGAATTACTCCAACCACCCCAACCTGATTGCACCCATGATCGATGTTCACGAGCTAGCGaacctgctgcagcagctgggaTTTAGGGTGGTGTCCCTGCTAGACCTCACCAAGCAGGAGATGTTGTCGGCCATTGATGCATTTCTACAGCTCCTGAACAGAGGAGTGTACGGTCATGGTTATGAATGTTCAGGACGAAACTATTTGGTTCCCATTGATGCACCCCAGCCCTATAGACGGGAGAACTGTCTTGGTGTGCAAAGAGTAATGCAGAGCATGCAGGAGAAGCACACTGCACTGAATGTGGTCTTGTTGGACACTTGCAGAAAATGgtATAACCAGGGGTGTGTTCCATCTGAGATCAGGTCACTGGCACCGTTGGGCAATACAGTATATGGATATGCCACGAGTGAAGATGCTGAGGCGTATGAGGTGCAGGATGGAGAGAGGAGCTCCGGCATCTTCACCAAGTACCTCAACAAACACATCTTGCTGCCGGAGAAAGTTACTCACGTTCTTGATCAGGTGCTGGAGGATCTAGGGAGAGACCCACTCATCACTGGGAGGCAGGTGATGGAGATCAAGCACACACTAAAGGACCCCCGGGCGCTGACCGACGACTTCTGCAATACAGGACACACAGTGGAGCTGCAGCTCAGAAACCTACGCTTGTTGAGCTTCGCCTGCGGGGTTGAGGTTGAGCTGAGCTTTTTTGCCTTGTTCTCCAATGTCATGATCATGTACGCCACGGTGAAGAGAACCCCCCCCACAGCCATGGACTGCAGTGTCAATCTGCGTAGCATTCCGGCAATGGACGATGTCTTCTCAAACAGTGCAAGCAGGTCGGATGCAGTGGATTCCTTGCTTATGAGCGGTCCTGATAAACCAGACTGCAGTTTAAGACTATGCGGCCTCCAGAAACTAAAGACGCCTCTGGTGATCAAGGTGGATTTGCATTATACGCACCCTGAAAAAATGCGACGCATCGTGGAAAGTGTGCAGGAGGTCATTGGAAAGCCTTTGGTGGCCAGATGTGAACTGCACCGgcagaggcaggcagagggCCCTGCGGGGCGAGAGGGCAGGGCAGCCGCCGCCGCCACTTTCCTGAGCGTGGAGCACAAGCAGCCCTGCAGAGCACCCTCCCGGCAGCCCCTGGGCCAGCCCTGCCGCCCCTCCACTCGCAAAGCGGAGAACGCCAGGGACCTTGTCTCCAAACGGCACTTGGCGAAGAGCAACGAGCCGGAGGAGAATGACGAGAACGAATTTTTACACTGTGGACACCCGACTCTGGGACAGAAGAGCAAATGCACCTTGTGATTTTAACACTTTCCCCAGCACATATCTGGGTACACTCGCCATTCCCCTGGGGCACCCTTGGGACTGGTCCGCTCATGACACTGGGAAATGGCACCGAAGCATCGCTCACAGTGTTTCTTGTGGATATCGTAGCGTTCGACGTCTtgggagattaaaaaaaatctaaaaactgtTAAACTATTGTTGGAAGTGTAGCCAAGGAAATCTGCATCACTTCTACTACTACATATGTACATGGCTTTTCAAACAGTATGTTCGAAAATGAAATGCTGTAACTGATCTATCTGTCATGTTTCAGATTTTCGTCACTGGTTAAATGGTCTGCTTTGATGGTATTTATAATTAGTTGCTTCACAAACTCAATAGGTTTTATGAGTGCTAAATGCAATACACATTTTTCAAGTTTTCCCCTCAATAGTATACATCCAACAGATTAACAGTGCTCGGAAAGTGTTACgaatcaatatatacaaacttgTATAGTTTAGAAAGTATACTGAAATATACTTTCATATGAGTAGTCAATATGTGACATTTTTTATGGTATGGATGTACTCCGCTTTGGATTCCATTCAAGTTTGTCctgaaggaaaaatacaattgttaatgtaaataaatttgCATTTGGTTATTACTTTAGTGTTTATGTTTTCAGATATGAATACATGACATACACTATAATGCTCCTATTAAAATCAGTTTAGCttgttgaatatatttattataatttggcAGACAAACTTTTCTGTTTAATCTGTTTCATTAATGTTTTGacaatttaataattgaatagATTTCATTGTACAACGGTATGTATTTGAGTTAACTTTACATCCTCATTTTTCAGAGGGCTTAAACtaatacatttctgtactttgatttattttatgcatgCAAAGTATTCCAGGAGTAATGTTGCTTTTCAGAACCCTTAAATAACTATGTCTGAAATcaagcataaaaaaatataataatgcagtTCATCATTTTAATGCGTTTTCAGACATGAGCTGTACTTAACGGTGGTTGCTTTGGACTCCTTTATATCTTCATTTgtgtatattcatattcatgtgTTGCAAATGCTAGGGTGTCACAATGTTGTGAGGAATGATAGAGGTGATTATATTACTAACCAAAACGCCTAGGATAACCAGTTCTCAttagtacatttgttttgtgggtgatatttatatatttctggtGCAATTCTCTTATTTTTgttcctattttttttattattgttaatatgttATCTGTATCTTTCCTTTGATCAAATAAGACTACATagaaatacagttcagtatCTACTCTGTATTCAAGGGTTTGTTGACAAGTGATTGTttctggaaacaaataaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007772 True 3631 mRNA 0.44 15 29233759 29256619

Neighbor

gene id symbol gene type direction distance location
AMCG00007771 frmd5,LOC108435336,LOC107562133 coding downstream 111446 29114380 ~ 29122313 (-)
AMCG00007770 frmd5,LOC108435336,LOC102299895 coding downstream 133270 29080151 ~ 29100489 (-)
AMCG00007759 cib2,LOC107757746,LOC107598895,LOC107698385,LOC107573330,LOC107752320 coding downstream 273655 28951619 ~ 28960104 (-)
AMCG00007760 dapk2a coding downstream 355742 28866604 ~ 28878017 (-)
AMCG00007761 NA coding downstream 367174 28862578 ~ 28866585 (-)
AMCG00007779 NA coding upstream 32450 29289069 ~ 29296557 (-)
AMCG00007780 NA coding upstream 119627 29376246 ~ 29377079 (-)
AMCG00007778 NA coding upstream 122425 29379044 ~ 29386305 (-)
AMCG00007783 NA coding upstream 148769 29405388 ~ 29427475 (-)
AMCG00007782 NA coding upstream 172036 29428655 ~ 29437506 (-)
G26115 NA non-coding downstream 1051 29230943 ~ 29232708 (-)
G26092 NA non-coding downstream 184594 29031410 ~ 29049165 (-)
G25987 NA non-coding downstream 499310 28734112 ~ 28734449 (-)
G25985 NA non-coding downstream 500765 28732764 ~ 28732994 (-)
G25968 NA non-coding downstream 531222 28676840 ~ 28702537 (-)
G26147 NA non-coding upstream 54999 29311618 ~ 29311943 (-)
G26165 NA non-coding upstream 109005 29365624 ~ 29366245 (-)
G26231 NA non-coding upstream 351698 29608317 ~ 29608596 (-)
G26342 NA non-coding upstream 1148379 30404998 ~ 30454628 (-)
G26352 anx2a,LOC105029377,LOC108433632 non-coding upstream 1175187 30431806 ~ 30437988 (-)
AMCG00007768 NA other downstream 219812 29001049 ~ 29013947 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other downstream 312636 28894693 ~ 28921123 (-)
AMCG00007704 NA other downstream 1863240 27357731 ~ 27370519 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other downstream 3162911 26053764 ~ 26070848 (-)
AMCG00007684 shf,LOC108430988 other downstream 3602167 25630792 ~ 25631592 (-)
AMCG00007817 NA other upstream 1935391 31192010 ~ 31246649 (-)
AMCG00007822 NA other upstream 2082097 31338716 ~ 31342792 (-)
AMCG00007835 LOC107594750 other upstream 2548280 31804899 ~ 31816151 (-)
G26961 LOC101154678 other upstream 5612816 34869435 ~ 34869807 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 6746574 36003193 ~ 36010995 (-)

Expression


Co-expression Network