AMCG00007775


Basic Information

Item Value
gene id AMCG00007775
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29321231 ~ 29336890 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007775
tagctgtgtgtgtgtatggctcGCCATACTCTCCCGAGGATGTCAGCGAGCTGTGCTAAGGGTCCTGATTGAAAGAACAGTAACTGAGCCTAATCTCTGAGTCTGAGAGACAGGAAGGACTGCGAAAGAGACAGAGGGGCGAAactagaaacaaaatacacattttaaagtgtagGAAATAAAAGAATACTCCATGGTTCCGTGAAGTATGAATTAATGTATACGCAACTGATGTTAATCCGATGCATCCAAGTAGAACAGAAAACTATAACTGTAGGGTATACATTAACCACGAAAACGATCGCAAAGGCCGAGACGGGGggaaagaaataatatatagcctgttaatatatatatataaagtgtatttacatgtataatCTCAAACGATTAACATTGTACTCCATTGTTAACTTGCCGCCGTGGTCGTTTAAACGTGCATCTTGGGGTATGCATTTGAAACGTACGAAGTGAGTCTTTGCAAAGTAGAACTACGATAATTAAGTTTTACGGTAGGAGTTCACAAACGAGACGATCGTGGGCTTTGCTGTTTACTTTAATACGACGTGCGTTGTTTATTTCAATAAGAGGGATTCAAATGAACCAGCGTTTTGTTTAGTTCGATCGGGGCCTTAAAAAAACTACTGAGTGTCGGTTCTGGAGAGGCGGGGAAGTAGCGAAGCTCGGTATAATGTGAATAGAAAGTCATAGTTTAAATGATTACAGTAACGATGGTGCAGTCTGTAATGTCACGGAACCGAAGTACTAAATAAGCGGCACATTGATTGTACTTTACTGCGATTTTGAGAGCAGCAGCCATGAGATCACATGACCCTGCTGAGTTGCCACGGTGAATAAACAGGATCCAAATGgtTTTTCTAGGTTTCCAAACATGGGTGACATGAAGACCCCAGATTTCGATGACCTTTTGGCCGCATTTGACATCCCTGATGCTACCAGCTTGGATGCCAAAGAGGCTATTCATACCAGCCATGATGAAGCTGAGGGTCACCAGAAACCTGCAGGGATGTGCCTGGAAGAGAATGTCTCCATCCACCACGTGCTGCCAGCCCCTGACCTCCCTGCAGTCAGCGTGATTGTCAAGAACACCAGCCGCCAGGAGTCCTTTGAGTCAGGCGTGGAGAAGGATGCTTGTCACCTTGGCCACAGCCTGTTGCACAATGGATTCCGGAGTTCGGGGGCCACCCTGGATTCTCACCACATGAGCCCAAGCAGCTATGGGAAGTTCGAGCCATCATTCCTCAATGGGGATAGCTCGAGAAGCTTCCTGGACAAAGTGGAAGCCCGCAAAACTGAACGTGTGACATCCTTCTCTCAGTTCAGTCCTATCTCAAGCCCAGAACCGGAGGACTCCCAGGATAACGGGATCGATGATAGACCGAAACAGGAGGAAAGACCCTACTTCCCTGCTGCATCTGTGTTCGTGTCTGCGGAGCGCTCCATGTTGGAAAATCTGAGAGGGCTTCCAGAGTACAGCATGTTTGACCAGTGCTCCAAAAGAGAACCTGTGAATGATGCTGGAAACGGCAGAGAAAAAGACACAGAGTTTTGCAGAGTAGAAGAGATTAGGGTACAGGAAAAAGGGGAAATGACTGTCGAAGACCATGCCAAGAAGACTAGTTTTCTTGGCAAACCCATGCTCCCCTTGGATGACCTTCACAACAATAATCTTGGCGAGCCAAAGAATTCCTTTGTTGCAGAAACTTGCTTGGGTTCATCTGTTCCACCTCGTCAGCGTATCAAATCGGCCAACTCCAAGCTGTCCTCTTGCCTTGCGGCGTTGGCAGCTCTGAATGCCAAAAAGGTTGCAGAGGTTCCAAAAGAAGTGCAGCCTCTTATATCCAGAGAGCCGCTAGCGGCTGTTAAAGAAACAGTAAAGGTTAGTTCCAAAGTGCCCAAGTCTCCAAAGAGCCCAAGGAGCCCACTGGAAGTAGTAAAACGGTTCAATAAGCAGCCAGATAGCCCAATGAGCGTCTGCAGCGATAGTAGTGGGAAAGCATCTCCTTCCCTGACTGCAGGTTCTCCCCCTGCGATCCCGAGAGTCCGAATAAAGACCATCAAAACCTCCTCTGGGCAAATTAAGCGAACTGTCACAAGCGTGTTGCCCGATTctgagctggaggagctgcaaTCTCCACCTGAGATGTCACCCTCCCAGTACGTGGCAGTCGACGAGTCATTGTCCAAGCCTGCATCATTCACACCACCTTCAAATAATGTGATTGACAATGTTGTCTTCGAAAACGGAAGGAATAAACCCTCCCACAAAAATACGTCCACGGTGCCGTCGCCTGGTGTGGCTTCGAAGCTGGCGTGTATGAAACCGGGCAGGATCGTGAACAGGACTGCCACAGTACCTCCTTCAGCAGCCTTTCACAATGCAAGCAGTGCCATCATGAGGGTGGTTAATGTAGTCCACCAAAAACAGCAGAAATCTTCGCCATCGGCCAATACCAACCTGCTCCCCAAAGCTGTCCACCTGGCCAATTTAAACCTGGTTCCTCACAGCGTGGCTGCCTCTGTCACAGCGAGATCCGCCACTCAGCATCAGAGCCAGTCCCGGCTGGCTGCTCCAATGGTGTGCAGCACAGTCCCTCTGGTGCACCAGGTCAAAAAAGCGGCCCCTCTTCCAACCTCTTCAATCCCCAGTGCAGCTGTAGGGGCCTTAAACCGACTCTTAAATGCTGCCAACCCTGTGCCATCGTATGTGCCCAACCTGCACCCTCCGCCAGAGAGCAACATCCGCTTGCCTGCCCGTGGCTATCGCTGCTTGGAGTGCGGGGACTCCTTTGGGCTGGAGAAGAGTCTACAGCACCACTACAGCAGGAGGAGTGTGCACATCGAGGTGGCCTGCACCCACTGCGCCAGGACGTTGCTCTTCTTCAACAAGTGCAGCTTACTTGCACATGCCAGGGAGCACAAGAGCAAAGGCATTGTGATGCAGTGTACCCAGCTCTTCATGAAGCCCATCTCTGCGGACCAGATGTTCGTGTCCACACACAACTCTTCAGGGCCTCCGACCACTCAGAGTGCCCAGCTGCCCTCTAGCTCTGTAGACCATGCAAGTAATGCCAAGGGCCAAGCAGTCATGCCTTTGTACCCAGACAAAGTCATTCGACACGGACTGAAATGTCTGGATTGTAGCAGGCAGTTACGGGATTACCCCTCCCTTGCAAGTCATTACCAGAGGTGTTCGGAGGAAACCGAGGGATTGACATGCCAAGTGTGCATGATGATGCTGCCTAATAAGTGCAGCTTCAAGGCTCATCAGCGAATCCACGCCCACAAGTCGCCTTACTGCTGCCCCGAGTGTGGGGCTGTGAGCCACTCCACTGACTTTCAGAAGCACGTAAAGGAGAACTGCCTTCACTATGCACGCAAGGTTGGCTACAAgTGTCTTCACTGCGATGTGgttttcatgtcattttatGTACAAAAGACTCATATTGAGGAAAAACACTGTGAAGTGTTTTTTAAGTGCTCCGTCTGTCCCATGGCCTTCAAATCTCCCGACAGCAGTGTTGTGCACATTAAGAGCAAACACCAGGCCGAAAAAGCCTCTCCACAGTACTGCACAGATGAAAAGGTTACATTTACCAAACATTTCATGCTGAAGAACCACATCAGTCTGATGCATGGCATTAAAAACCCCGACTTCAGCCAGATGGCAAAAATAGCCCCTTCAGAGAACAGCAGTAAAAGTTCTACACAGGTGCCAGTGGCGAAAAGGTCAGCAGAGGACGCCCTTGCGGGAGGAGGGGAGAACGCTGTCCCTGAGGCCTCCCCTGCAAAGAGACTCAGACCGCAGTTCAGGTGCTCCAAGTGTGGCTTCTCCACGGAGGACAGCACGCAGTTCCAGGAGCACATTCCCCAGCACAAGACTGATGACGGCACGTTCCAGTGCCTGCGCTGCGGCCTGTGCTTCACCTCCCAGCTCTCGCTCAGCAGACACCTCTTTATCGTCCACAAGGTGAAGGAGCCGGACGAAGAAAAGGAGGTCGACGCAGAGGAGCAGGAGACAGACGAGGGCGAGCAAGAGGAAAGAGCAGAGCTGGGTGATAAAGAGACGGGAGATCCGGTGGCAGCCGTAGGGCCGATTAACACTAACTCAGCAGAGGAATCGTCAGGGCTGCAGTGTAACATCTGCAGCAAAGCCTTCGAGAATGAGCCGGAGTACGTCGCTCACGTGCGGACTCACGGGATGTCCTTCCTGAAGGCCAAGCAGAACGTAGGACCTGAACAATgaggaagataaaaaaaatatatattataaaaaaataaaatcataaaagctGCTAATTTTGCCCATTTAATGGGTAGACAAGGAACCtgtacattttgatgtatctgaGCAGCTTTGAAATGTGGTACTTCAATTTAATTCCCTTTGccatcaatttacattttttaaatttgcgTTCCTAAACTCTGAACAGGATGCAGCATGTCTCTGATTTACATCACTTTGACGTAATCTAGGAGAATTCCAGGTACCAACAATTTGAAACTTCAATGAGTTTAACCAATATAAAGGAAAGAATTAATCATATGTCTGCTtaataacatatatttatatagatacatatatatacacacacataaattgCTATATTATATAAGTTGACTGAAAagattgcatttgctttttatatatgcCCTATTTTATGGACTTTTCACGTTTTCCATTTAGTGTCAAGCACATTTGTTGTGGAACTCCATTCAACAAAAACGTGTggtgctttatatatatatttttcgtCTAAAAGGAACATGGACTCAAGTCATTTCTCTGTCCTTTTAGTCTTATGTGGAGTTCTTTGACAGTAAGAGCAGTAACAACACTCGTTTcagataaaatattaaaaatatatattttttattttttatttgacagtaTCATAATTTGGGTTTTCATACATCcccaaatttaaaacatttatgccTCACTAGCTAGATGTCatcaaatgaaatacatttgaatgtccATTCCATGCCAAATAAGCAAACAACACTCTGACATACCTTTTCTTTATTCAATGAGCCATTCTTATAACCAAAGTAGCACTTTCCTTGCAGGGTCATTGTATGTGGATTACAGGGGAGAACCCTCTTCTGTAATGAACATGTGTGTTACTTTTACATCAGAATGACAGCGGTTACTCTGAAATCTCTGTCCATGTGTTAAAACCTACAGTATCTTCTTCCAAATGCAACTTTGAATTATAAATGCAAGGCAAATTAATGAGAATGTTTTGAGCACAGTTACCATCCTAGCTTTCCTACAGATGGTCACCCAGATGTTAGGtcctattaaaaacaataatgtccCTAACTGTATTTGGTTGTCTTGCTCTAAGAAACAATTGCATTCATTAATAAAGTCTTTTGTGCATTGGGGGGTGGAATCTAATCAGGTACATCCAAAAACAGATTGTTGacttgacattttaaagaaagcaaattaTGCAgacttaagaaaacaaaagaggGGATTTCCATTCCTGTTAGTAAGGTAGATACACCTTTAAGGTATGATTGATGTTTGAATGCAGGAGAATGTGTATAATTGCTTGGTGAGTTTGTCATTTCTACCTTTACGAAGTGTTCTGGGTTGACTGTTGGATATGAGGTATTTTTGGGAGGTCAtttgactgtactgtattattgcatttaaatgaaaaaaaaaaaatctttaaatatctTATCTCCCATATTAATCAATTTTATAAATTACTTTggagatttatatttatagtcaTATTGACTTTTTTTCATGTGAACTTTCTATTTAAGTGCTGTACTACCTTGTGCATTTCTTTCCATATGTGTttataaagttttgttttgttctgttagTTTCTTTTTCCTTAAAACCAAGATCCTCTTTACTGTTTACTGAAGAGTggctaatttaaaatatttatcttaatgAACTGAGATTATGCTCTTTCCAATTCCAGTGTTTTTGATACAGCCTATACAGAGAAACATTTGTACTTTTTGATAATGTGTACAGTAGCATAGAGGACCTTGTACAAGATAGTCTGTGTAGATAGCGAGTAGATTCACATGTCTATCAGGGATTTCTCCCAAGCCATCACATATCTATTTAACCTGCGTTGGCCTCTGTGCCTTGCTGTTATGTTTacctgcaaataaaatacatatgtcagtaaa

Function

GO: NA

KEGG:

id description
K19325 ZNF592; zinc finger protein 592

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007775 True 6198 mRNA 0.45 6 29321231 29336890

Neighbor

gene id symbol gene type direction distance location
AMCG00007774 NA coding upstream 32538 29258430 ~ 29288693 (+)
AMCG00007766 NA coding upstream 249775 29059031 ~ 29071456 (+)
AMCG00007764 blm coding upstream 265780 29032754 ~ 29055451 (+)
AMCG00007765 NA coding upstream 289024 29024785 ~ 29032207 (+)
AMCG00007767 idh3a,LOC107757767,LOC107659502,LOC103353692,LOC102780018 coding upstream 321146 28989713 ~ 29000085 (+)
AMCG00007773 sec11a,LOC107691153 coding downstream 2756 29339646 ~ 29342580 (+)
AMCG00007776 NA coding downstream 14180 29351070 ~ 29351882 (+)
AMCG00007777 kti12,LOC107562123,LOC107715238,LOC107725737 coding downstream 18161 29355051 ~ 29361487 (+)
AMCG00007781 tspan3,tspan3a,LOC107690355 coding downstream 56017 29392907 ~ 29402001 (+)
AMCG00007785 NA coding downstream 96122 29433012 ~ 29437033 (+)
G26146 NA non-coding upstream 9287 29311623 ~ 29311944 (+)
G26103 frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903 non-coding upstream 238850 29074456 ~ 29082381 (+)
G25984 NA non-coding upstream 589830 28731130 ~ 28731401 (+)
G25827 NA non-coding upstream 1211641 28104602 ~ 28109590 (+)
G25819 NA non-coding upstream 1243110 28070346 ~ 28078121 (+)
G26167 NA non-coding downstream 30483 29367373 ~ 29367723 (+)
G26171 NA non-coding downstream 37486 29374376 ~ 29375878 (+)
G26196 LOC107575789 non-coding downstream 202793 29539683 ~ 29540062 (+)
G26243 LOC106587622,LOC106562410 non-coding downstream 389504 29726394 ~ 29729537 (+)
G26249 NA non-coding downstream 401812 29738702 ~ 29741082 (+)
AMCG00007769 acsbg1 other upstream 314852 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 409665 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 621169 28682171 ~ 28700062 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other upstream 866524 28438644 ~ 28454707 (+)
G25822 NA other upstream 1226490 28083822 ~ 28094741 (+)
AMCG00007788 NA other downstream 285421 29622311 ~ 29724734 (+)
G26258 tpm1,tpma,LOC108237348 other downstream 418150 29755040 ~ 29819552 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 2077264 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 4426623 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 6274092 35610982 ~ 35620801 (+)

Expression


Co-expression Network