AMCG00007776


Basic Information

Item Value
gene id AMCG00007776
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29351070 ~ 29351882 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007776
ATGGCCGAAATCACAGTGAACCGAATCTGTCAACTGGGGTTCCTAACGTACCTGCTGCTCTTTACCTATGTGTCCACGACCACAGCAGTCAGCCTCGATCTTACAGAACTCAGAAATAAAGTTGCAAAAATCAAAGTTAACCCGAGGGGCAATCTATGGGCAACAGGTCATTTCATGGGCAAGAAGAGCGTCCTGGACAGCCCGCTGCTGGCGGCTCCCGGTGACTCGGCGGCGCTGGACCCGGAGCGCAGCGCGCAGGACGTCAGGGAGCTGATCACGCAGGAGGTGCTGAAGGTCGCGCTGCAGGCTCAGCTGCAGGACTCCACCGCCAGACAGGAGCTCAACGACCAGGTAAATCAGTCGACCGCCCCGCAAACCAGGATAGACAGATTTCTACCGTCCCGACTGGACCAGTGCTTCCAGTGTAACGTTGGTGAGATGATCAGGAGAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007776 True 453 mRNA 0.57 2 29351070 29351882

Neighbor

gene id symbol gene type direction distance location
AMCG00007773 sec11a,LOC107691153 coding upstream 8490 29339646 ~ 29342580 (+)
AMCG00007775 NA coding upstream 14180 29321231 ~ 29336890 (+)
AMCG00007774 NA coding upstream 62377 29258430 ~ 29288693 (+)
AMCG00007766 NA coding upstream 279614 29059031 ~ 29071456 (+)
AMCG00007764 blm coding upstream 295619 29032754 ~ 29055451 (+)
AMCG00007777 kti12,LOC107562123,LOC107715238,LOC107725737 coding downstream 3169 29355051 ~ 29361487 (+)
AMCG00007781 tspan3,tspan3a,LOC107690355 coding downstream 41025 29392907 ~ 29402001 (+)
AMCG00007785 NA coding downstream 81130 29433012 ~ 29437033 (+)
AMCG00007784 scaper,LOC106561156 coding downstream 85784 29437666 ~ 29485183 (+)
AMCG00007787 etfa,LOC107712526,LOC107557988 coding downstream 234591 29586473 ~ 29608597 (+)
G26146 NA non-coding upstream 39126 29311623 ~ 29311944 (+)
G26103 frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903 non-coding upstream 268689 29074456 ~ 29082381 (+)
G25984 NA non-coding upstream 619669 28731130 ~ 28731401 (+)
G25827 NA non-coding upstream 1241480 28104602 ~ 28109590 (+)
G25819 NA non-coding upstream 1272949 28070346 ~ 28078121 (+)
G26167 NA non-coding downstream 15491 29367373 ~ 29367723 (+)
G26171 NA non-coding downstream 22494 29374376 ~ 29375878 (+)
G26196 LOC107575789 non-coding downstream 187801 29539683 ~ 29540062 (+)
G26243 LOC106587622,LOC106562410 non-coding downstream 374512 29726394 ~ 29729537 (+)
G26249 NA non-coding downstream 386820 29738702 ~ 29741082 (+)
AMCG00007769 acsbg1 other upstream 344691 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 439504 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 651008 28682171 ~ 28700062 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other upstream 896363 28438644 ~ 28454707 (+)
G25822 NA other upstream 1256329 28083822 ~ 28094741 (+)
AMCG00007788 NA other downstream 270429 29622311 ~ 29724734 (+)
G26258 tpm1,tpma,LOC108237348 other downstream 403158 29755040 ~ 29819552 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 2062272 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 4411631 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 6259100 35610982 ~ 35620801 (+)

Expression


Co-expression Network