AMCG00007777 (kti12,LOC107562123,LOC107715238,LOC107725737)


Basic Information

Item Value
gene id AMCG00007777
gene name kti12,LOC107562123,LOC107715238,LOC107725737
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29355051 ~ 29361487 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007777
GGCCGCCTCCTGACAGTCAACTCGAGAGTGCATCAAATACATACGATGCCGCTGATTGTGATGTGTGGCTTTCCTTGTAGTGGAAAAAGCCAAAGAACAGAGGAATTAAAAGCTTATTTTGCACAGAGCACGGAGAGAAAGGTGCACATCGTTGGTGATGAGACGGTGGGGATTGACAAGAACTGTGTATATGCAGATTCCCAGAAAGAGAAGAACCTACGGGGAGCATTAAGAGCTGAAGTTGAGAGGAAAGTTAACAAAGATGATATTGTGATTCTGGACTCGCTGAATTACATTAAAGGTTACAGATATGAGCTGTTTTGTCTAATCAAGCACACCCAGACTCCGCACTGTCTGGTTTATTGCTTAACCTCAGCAGAAGTTAGCTCTACGTGGAATAAGAGTAGGGATGTAGAGAAGCAGTACACCCAAGACATATTAGATGCTTTGGTTATGAGATTTGAGGCTCCAGACTCTAGGAATCGATGGGACAGCCCTCTCTTTACGATTCAGAAAGAAGACTTGCTGCCGTGTGAAGCAATCTCTGATGCCATCTTTCATAGGAAGGCACCTCCTCCTAACCAGTCTACACAAAGTCAACCGCTGTCATCCACAAGCTTTTTATATGAGTTAGACAAAGTGACCCAAGATGTGCTGATGgctgttttaaatgcacaaaagaCCAGTGTTCCCGGGGATCTCATAGCTTTACCTGGAGCCACGGAGAAAATATCCTTTGGGTAG

Function

symbol description
kti12 Predicted to enable ATP binding activity. Orthologous to human KTI12 (KTI12 chromatin associated homolog).

NR:

description
PREDICTED: protein KTI12 homolog

GO:

id name namespace
GO:0005524 ATP binding molecular_function

KEGG:

id description
K15456 KTI12; protein KTI12

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007777 True 744 mRNA 0.45 8 29355051 29361487

Neighbor

gene id symbol gene type direction distance location
AMCG00007776 NA coding upstream 3169 29351070 ~ 29351882 (+)
AMCG00007773 sec11a,LOC107691153 coding upstream 12471 29339646 ~ 29342580 (+)
AMCG00007775 NA coding upstream 18161 29321231 ~ 29336890 (+)
AMCG00007774 NA coding upstream 66358 29258430 ~ 29288693 (+)
AMCG00007766 NA coding upstream 283595 29059031 ~ 29071456 (+)
AMCG00007781 tspan3,tspan3a,LOC107690355 coding downstream 31420 29392907 ~ 29402001 (+)
AMCG00007785 NA coding downstream 71525 29433012 ~ 29437033 (+)
AMCG00007784 scaper,LOC106561156 coding downstream 76179 29437666 ~ 29485183 (+)
AMCG00007787 etfa,LOC107712526,LOC107557988 coding downstream 224986 29586473 ~ 29608597 (+)
AMCG00007796 NA coding downstream 568261 29929748 ~ 29941831 (+)
G26146 NA non-coding upstream 43107 29311623 ~ 29311944 (+)
G26103 frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903 non-coding upstream 272670 29074456 ~ 29082381 (+)
G25984 NA non-coding upstream 623650 28731130 ~ 28731401 (+)
G25827 NA non-coding upstream 1245461 28104602 ~ 28109590 (+)
G25819 NA non-coding upstream 1276930 28070346 ~ 28078121 (+)
G26167 NA non-coding downstream 5886 29367373 ~ 29367723 (+)
G26171 NA non-coding downstream 12889 29374376 ~ 29375878 (+)
G26196 LOC107575789 non-coding downstream 178196 29539683 ~ 29540062 (+)
G26243 LOC106587622,LOC106562410 non-coding downstream 364907 29726394 ~ 29729537 (+)
G26249 NA non-coding downstream 377215 29738702 ~ 29741082 (+)
AMCG00007769 acsbg1 other upstream 348672 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 443485 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 654989 28682171 ~ 28700062 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other upstream 900344 28438644 ~ 28454707 (+)
G25822 NA other upstream 1260310 28083822 ~ 28094741 (+)
AMCG00007788 NA other downstream 260824 29622311 ~ 29724734 (+)
G26258 tpm1,tpma,LOC108237348 other downstream 393553 29755040 ~ 29819552 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 2052667 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 4402026 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 6249495 35610982 ~ 35620801 (+)

Expression


Co-expression Network