AMCG00007782


Basic Information

Item Value
gene id AMCG00007782
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29428655 ~ 29437506 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007782
CCGGGGTGCTTGGTACTCAGCCGGCACGGAGACCTTTACCCTGCGCTGCTCCCGGAGAATAAGCACGGCTGGGGCGCTCGGTGCTCTGCTGAGCTGGCAGCTATTCCAGGGCCTCTGCTGTCACCCTCACAGCACAAGGGCTGTGCATTCCTCTCCCTCAgtcgcagcagcagcagcgagagagagatgagtATTATCTCCACCCAGTCAGGGCCTGCGAATAAGAAGGCCCTTTCCACAAGCTGTTTGGGGAAGATGCACGTCACCCTGATATGGGCCTTGTTTGCCCTGTGTCCCGTCTCCACTGAACAGGATTTGAATGACCACCATGTTGACGGCAAGCACAATCCAGAGCATGACGCCAACATCTTGCTTGGAAGGAAGgACCCAGATGAGGTTGGAGAGCTTAGTCCTGCTGAACAGAAAAGAAGACTGGCAGTGATTGTGAAGAAGATCGACAGCAATTCAGATGGCTTTCTCACTGAAGgtGAAATCATTTTATGGATAAAACAAGTTTACAAGGGATATGCTTTGGAAGACGTGAAGGAAAGGTTGCCAGAGCTTGATAAGGACGGTGACGGTGCGGTGTCCTGGGATGagtataatgtgtttttacacGGACACGTCATCGAAGTAGATGAGAATACAGTGCGGGAAGATCCGGAAGAAGAATCTATTAGAATTCTACATTTGAAGTATAAGAAACGCTTCAATCATGCCGACGCGGATGGGAACTCTGGCCTGAACCTTACAGAACTACTAGCATTCTTGCATCCGTCAGAAGTCGATCACATGGCAGATTATGCTATTGAGGATATAAGGAAAGACTTCGACCAGGATAATGACGGGTTCATCAGTCTCAATGAATTTCTTGGAGATGTCCGAAGTCCGGATGGTGAGAATAGAACGCAATGGGAGATCTACGAAACTGTTCGCTTCAAGAGCCTTTACGACATGGATGGAGATGGCAAACTTAATAACGATGAGCAGCTTCTCTGGgccTTTCAGCTGATCAAGGAAATGGACAGCAATGGTGATGGGAAGCTGTCCGAAGCCGAGATTATGGCCAATCAGCAGATATTTGTGCAAAGTGAAGTGACTGACTATGGCAGACAACTCCATTCAATACACGATGAactttaacttttgtttttgttttccctgttctaagtgtctatTTTTGGCTTGAGAAAATTGAACCATTgtctggatttttattttttttaattaaaccccAGACCTGGAGTGGTTATGAAATGGGAAGTTGAGGACAAAAATGTCTAATCATTCAATCGCACCTGTTTCAAAACTGGTGGTATGCCAGTTTGTCAAATAAAATtgtttggggaaaacaaaatgtgattaggctggttttcattaaaaggctg

Function

GO: NA

KEGG:

id description
K23899 RCN2; reticulocalbin-2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007782 True 1388 mRNA 0.46 9 29428655 29437506

Neighbor

gene id symbol gene type direction distance location
AMCG00007783 NA coding downstream 1180 29405388 ~ 29427475 (-)
AMCG00007778 NA coding downstream 42350 29379044 ~ 29386305 (-)
AMCG00007780 NA coding downstream 51576 29376246 ~ 29377079 (-)
AMCG00007779 NA coding downstream 132098 29289069 ~ 29296557 (-)
AMCG00007772 NA coding downstream 172036 29233759 ~ 29256619 (-)
AMCG00007786 LOC102216635,LOC103354952,LOC105930457,LOC105022634,LOC104917923,LOC106945593,LOC103149886 coding upstream 136828 29574334 ~ 29585227 (-)
AMCG00007789 NA coding upstream 179765 29617271 ~ 29640100 (-)
AMCG00007794 NA coding upstream 238411 29675917 ~ 29683071 (-)
AMCG00007791 NA coding upstream 291376 29728882 ~ 29735699 (-)
AMCG00007790 NA coding upstream 301232 29738738 ~ 29750579 (-)
G26165 NA non-coding downstream 62410 29365624 ~ 29366245 (-)
G26147 NA non-coding downstream 116712 29311618 ~ 29311943 (-)
G26115 NA non-coding downstream 195947 29230943 ~ 29232708 (-)
G26092 NA non-coding downstream 379490 29031410 ~ 29049165 (-)
G25987 NA non-coding downstream 694206 28734112 ~ 28734449 (-)
G26231 NA non-coding upstream 170811 29608317 ~ 29608596 (-)
G26342 NA non-coding upstream 967492 30404998 ~ 30454628 (-)
G26352 anx2a,LOC105029377,LOC108433632 non-coding upstream 994300 30431806 ~ 30437988 (-)
G26370 NA non-coding upstream 1172712 30610218 ~ 30611693 (-)
G26403 NA non-coding upstream 1362905 30800411 ~ 30875378 (-)
AMCG00007768 NA other downstream 414708 29001049 ~ 29013947 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other downstream 507532 28894693 ~ 28921123 (-)
AMCG00007704 NA other downstream 2058136 27357731 ~ 27370519 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other downstream 3357807 26053764 ~ 26070848 (-)
AMCG00007684 shf,LOC108430988 other downstream 3797063 25630792 ~ 25631592 (-)
AMCG00007817 NA other upstream 1754504 31192010 ~ 31246649 (-)
AMCG00007822 NA other upstream 1901210 31338716 ~ 31342792 (-)
AMCG00007835 LOC107594750 other upstream 2367393 31804899 ~ 31816151 (-)
G26961 LOC101154678 other upstream 5431929 34869435 ~ 34869807 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 6565687 36003193 ~ 36010995 (-)

Expression


Co-expression Network