AMCG00007785


Basic Information

Item Value
gene id AMCG00007785
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29433012 ~ 29437033 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007785
ATGTCTAAAGACTGCCGCAATGATGGCAGACGGCGTGGAGCTGGGCAGCACCGGCTCGGCCCTGCGCTGGACGGCAGGGAGAGAGCGGGGAAGAGGATGGGCCCTGGCGTGGACGGGAGGGAGAGGTCTGGGAGCAACAGCTCGGGGTCGTCGCACGGAGGAGGCAAAGGGAAGAATACCCCAATCAGCATCGCACTGAAGAGCTGGGTCCAGGGGAACTGCCTAACGCTGAAAGCTGAATTATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007785 True 246 mRNA 0.62 3 29433012 29437033

Neighbor

gene id symbol gene type direction distance location
AMCG00007781 tspan3,tspan3a,LOC107690355 coding upstream 31011 29392907 ~ 29402001 (+)
AMCG00007777 kti12,LOC107562123,LOC107715238,LOC107725737 coding upstream 71525 29355051 ~ 29361487 (+)
AMCG00007776 NA coding upstream 81130 29351070 ~ 29351882 (+)
AMCG00007773 sec11a,LOC107691153 coding upstream 90432 29339646 ~ 29342580 (+)
AMCG00007775 NA coding upstream 96122 29321231 ~ 29336890 (+)
AMCG00007784 scaper,LOC106561156 coding downstream 633 29437666 ~ 29485183 (+)
AMCG00007787 etfa,LOC107712526,LOC107557988 coding downstream 149440 29586473 ~ 29608597 (+)
AMCG00007796 NA coding downstream 492715 29929748 ~ 29941831 (+)
AMCG00007797 vps13c coding downstream 508087 29945120 ~ 30043181 (+)
AMCG00007798 rora,LOC103141220,LOC106561150 coding downstream 951160 30388193 ~ 30401103 (+)
G26171 NA non-coding upstream 57134 29374376 ~ 29375878 (+)
G26167 NA non-coding upstream 65289 29367373 ~ 29367723 (+)
G26146 NA non-coding upstream 121068 29311623 ~ 29311944 (+)
G26103 frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903 non-coding upstream 350631 29074456 ~ 29082381 (+)
G25984 NA non-coding upstream 701611 28731130 ~ 28731401 (+)
G26196 LOC107575789 non-coding downstream 102650 29539683 ~ 29540062 (+)
G26243 LOC106587622,LOC106562410 non-coding downstream 289361 29726394 ~ 29729537 (+)
G26249 NA non-coding downstream 301669 29738702 ~ 29741082 (+)
G26262 NA non-coding downstream 362724 29799757 ~ 29803603 (+)
G26319 NA non-coding downstream 965532 30402565 ~ 30406647 (+)
AMCG00007769 acsbg1 other upstream 426633 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 521446 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 732950 28682171 ~ 28700062 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other upstream 978305 28438644 ~ 28454707 (+)
G25822 NA other upstream 1338271 28083822 ~ 28094741 (+)
AMCG00007788 NA other downstream 185278 29622311 ~ 29724734 (+)
G26258 tpm1,tpma,LOC108237348 other downstream 318007 29755040 ~ 29819552 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 1977121 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 4326480 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 6173949 35610982 ~ 35620801 (+)

Expression


Co-expression Network