AMCG00007791


Basic Information

Item Value
gene id AMCG00007791
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29728882 ~ 29735699 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007791
ATGGATgtaaatgttgattttgttaaCCCAGCATCAGAAAGCAAAGCTGGGTACATACTTAGCAATGTAGCCGAGGTGGTGGAGAGGATTCTGACTTTCGTCCCGACCAAGTCGCTGCTCCGCATCGCTTGTGTGTGCCGCCTGTGGAAGGAATGCGCCCGCCGGGTCCTGAGGACGCAGCAGAGGATGGCCTGGGTCTCCGCCACGGGCTCGGCCAGCTTCGGCGGAGGCGGCCATGCTCTGTGCAAGACTATGAAGGAAGAAGTGGAGGTAATCCCTAAAAGTCCCAGAACAGCATGTAGCTCCACGGCCGCCACTGAGCTTAGAAAGCTGCTTCCTAAAGGATGTGAGGTGCTGGGGATCACTGCTCCAGGGATTGTGTTAACGCCGACAGGATCTCATTCTGCCCAACCCAAGGAGTTCCAAGAGGGAGAGGCGGGCTTTGCGCTCATGTTCCCAAACATGGAGGGAATAAATATCCGCCCCTTCCATTTCTGCAAGCAAAGCCTCACCAAGACGTCTCTTGAAGAAGCGGGGCTTGTTAATAACCCAGACCTGCGGGTGGTTCTCTTGTTTGGCTATGAGGCCTTCAAGTCAGGAGCAGCACGCTTTCTGACTGAGGTCCTGGCGCCTCTGGCACAAGCCAAAATCCTAATTGCAGGCGGCCATGTGGAAAATGTCTGCTCCCCAGGCTCATACGGAGTGGTGGGCCTGGCGCTGAGTGGGCCGAGGATCCAAGGGGCGTCAGTCCTGCTGGACCAGGATGTGAGCACCGAGAAGTCTGCCGAGGCAGCAGTGCAGCGCCTGAAATCAGCCGGCCTCCCTGAGAGGAACACCGTGGCCTTCATGTTTGCCTGTGTGGGCCGCGGCCACAACTACTACAATGGCAAGCACAATGTGGAGGCCGATGCCTTCCGCAAGGTCTTCCCCAACATCCCCCTGTTCGGCTTCTTCGGCAACGGAGAGATCGGCTGCGACCACATTGTGACTGAGAACTACTCACTGACCGACACTGACAGCCTGCAGCACGGTTACACCACAGTGATGACCCTG

Function

GO: NA

KEGG:

id description
K10302 FBXO22; F-box protein 22

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007791 True 1053 mRNA 0.57 6 29728882 29735699

Neighbor

gene id symbol gene type direction distance location
AMCG00007794 NA coding downstream 45811 29675917 ~ 29683071 (-)
AMCG00007789 NA coding downstream 88782 29617271 ~ 29640100 (-)
AMCG00007786 LOC102216635,LOC103354952,LOC105930457,LOC105022634,LOC104917923,LOC106945593,LOC103149886 coding downstream 143655 29574334 ~ 29585227 (-)
AMCG00007782 NA coding downstream 291376 29428655 ~ 29437506 (-)
AMCG00007783 NA coding downstream 301407 29405388 ~ 29427475 (-)
AMCG00007790 NA coding upstream 3039 29738738 ~ 29750579 (-)
AMCG00007792 tpm1 coding upstream 21757 29757456 ~ 29765855 (-)
AMCG00007793 tpm1 coding upstream 30239 29765938 ~ 29774953 (-)
AMCG00007795 LOC103354956,LOC102781786,LOC102208509 coding upstream 64047 29799746 ~ 29864611 (-)
AMCG00007801 foxb1,LOC103353681 coding upstream 773183 30508882 ~ 30509502 (-)
G26231 NA non-coding downstream 120286 29608317 ~ 29608596 (-)
G26165 NA non-coding downstream 362637 29365624 ~ 29366245 (-)
G26147 NA non-coding downstream 416939 29311618 ~ 29311943 (-)
G26115 NA non-coding downstream 496174 29230943 ~ 29232708 (-)
G26092 NA non-coding downstream 679717 29031410 ~ 29049165 (-)
G26342 NA non-coding upstream 669299 30404998 ~ 30454628 (-)
G26352 anx2a,LOC105029377,LOC108433632 non-coding upstream 696107 30431806 ~ 30437988 (-)
G26370 NA non-coding upstream 874519 30610218 ~ 30611693 (-)
G26403 NA non-coding upstream 1064712 30800411 ~ 30875378 (-)
G26416 NA non-coding upstream 1167970 30903669 ~ 30903895 (-)
AMCG00007768 NA other downstream 714935 29001049 ~ 29013947 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other downstream 807759 28894693 ~ 28921123 (-)
AMCG00007704 NA other downstream 2358363 27357731 ~ 27370519 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other downstream 3658034 26053764 ~ 26070848 (-)
AMCG00007684 shf,LOC108430988 other downstream 4097290 25630792 ~ 25631592 (-)
AMCG00007817 NA other upstream 1456311 31192010 ~ 31246649 (-)
AMCG00007822 NA other upstream 1603017 31338716 ~ 31342792 (-)
AMCG00007835 LOC107594750 other upstream 2069200 31804899 ~ 31816151 (-)
G26961 LOC101154678 other upstream 5133736 34869435 ~ 34869807 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 6267494 36003193 ~ 36010995 (-)

Expression


Co-expression Network