AMCG00007796



Basic Information


Item Value
gene id AMCG00007796
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29929748 ~ 29941831 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00007796
ATGGCATCCACCGCCTGCAAGAACTGCACGACACGTTTCCTACAACTTTCGCTCAAAGATGCAGAGGTCATCTACCCATGTGAAATCTGCAACCGACGCATCAGAAAGACCCCCGTGGGCCGCATTCAAATAGCCGAGCATGTGCACGGCTACAATGTTTCCGCTATTCGATTTGTTGCTCTTCTCCTTGATCCTGTGCCCATGTGGGTGGTGGACAAGATCCGTGTGTCTGTGGAAAGAACAAATCTGGCTCTCCCCGTAGCGGAATACAGTTTCAAAATCGTAGACATCATGTTTGGAGGAGACAAATcttcagagaaaaacaagaaaatctcCATGTGTCCAAATATCATCACCCCAGATCGCATTCCTGAGTTCTGCATCCCACCCAAATTCTCCTCCCAGCAGGATCTAAAGCCTGCTGAACCGATCAAGCCCACTCCCAGCATAAAGATTTCCATGTCGGAGAAGGGAAGCCCCAGAAAAGAAGCCCTGATCCAAGAACTGCCCAACACGCACGTGATCCAGGTGGAAAGTGTTGATGAGATGCCCTTCGACTATGGATACAGTGATGAAGAGAGCACCAATGCAGATCCCCAGTCCCAAGCCGCTCTTTCCTTGCCCCACCTGGCGAAAGCCCAGACCTGCTATGGATTTTGCACTTTACTAGAAAGCCCCCACACCCGGAGAAAGGAGTCTCTATTCCACAATGATCCCAACTCCTGTGGAATCCCCATCTTGCTTCCCAAAGGCAGGTGTGGCACTTATTCCAAagtctcctcttcctccttcagCCTCAACTCTCTGACTTCCAGACTGTCACCCAAAAGCTTTCAAAGGCAAGGCACTTTGGACAGTGACACTGCCTCATCCACCGAATCCTCCCCTTTCAGCTCTCCGCTGCTTGCCCGGTCTCCTCCCAAAACATCTTTATTCAAGACATTAAGCCAAGAGAAGCTGTTTTCCAGGActgtcaaaaaaacaacagtagcCAGGAACAACTCGTTGTCAACTGATGAAGGAAGTTCAACAGACAACAGCCCTAATATAATGAGAAGGGCTTCTGAGGGTTTGGTGGAGCCTCTGCCTGGCAGCTATGGTTTAACACCCCCTGCCATTTTCCCAATGGACCTGGTGTACTACCGGGACAGAGTCATGAAGGAAAGTCTAATACCTGTGGGCAGAGAAGGTACCCTAAGACTTTCGGCCGAGTACTGCCCAGATAACCAGAGGCTGCGTGTGCGTCTGATCAGTGCTGAAGGGCTTTATGCCCTCTCTGTGGACCCCAAAAGCATAAACTGCAGTGTCAGCATTTCTCTAGTGCCAGGAAAAATCCAGAAGCAGCGCAGCACTGTCATCAGGAAAAGCCGGAATCCTATTTTCAACGAAGATTTTTTCTTTGACAGGATTTCCGAGGAAGAACTCTCTTACAGGTCCCTGCGGTTTAAAGTAGTAAACAAAATGTCAAGCATGAAACGAGATTATGTCTTAGCTGACTGTGAGCTCCCTCTGATGAGTATTTTACCTGTGTAATGTTTCTGATTGAATATGACTCTCTctttattgatgtatgtatttaaagcactatttatttatacttttatactaTGCAAAGAACTGTTTTGATATtaaattatgacaattatgaGAAACGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00007796 True 1655 mRNA 0.47 2 29929748 29941831

Neighbor


gene id symbol gene type direction distance location
AMCG00007787 etfa,LOC107712526,LOC107557988 coding upstream 321151 29586473 ~ 29608597 (+)
AMCG00007784 scaper,LOC106561156 coding upstream 444565 29437666 ~ 29485183 (+)
AMCG00007785 NA coding upstream 492715 29433012 ~ 29437033 (+)
AMCG00007781 tspan3,tspan3a,LOC107690355 coding upstream 527747 29392907 ~ 29402001 (+)
AMCG00007777 kti12,LOC107562123,LOC107715238,LOC107725737 coding upstream 568261 29355051 ~ 29361487 (+)
AMCG00007797 vps13c coding downstream 3289 29945120 ~ 30043181 (+)
AMCG00007798 rora,LOC103141220,LOC106561150 coding downstream 446362 30388193 ~ 30401103 (+)
AMCG00007799 NA coding downstream 467200 30409031 ~ 30429130 (+)
AMCG00007800 anx2a,anxa2,LOC108433632 coding downstream 488009 30429840 ~ 30438133 (+)
AMCG00007802 bnip2,LOC107703138 coding downstream 648383 30590214 ~ 30608023 (+)
G26262 NA non-coding upstream 126145 29799757 ~ 29803603 (+)
G26249 NA non-coding upstream 188666 29738702 ~ 29741082 (+)
G26243 LOC106587622,LOC106562410 non-coding upstream 200211 29726394 ~ 29729537 (+)
G26196 LOC107575789 non-coding upstream 389686 29539683 ~ 29540062 (+)
G26171 NA non-coding upstream 553870 29374376 ~ 29375878 (+)
G26319 NA non-coding downstream 460734 30402565 ~ 30406647 (+)
G26360 NA non-coding downstream 568704 30510535 ~ 30522510 (+)
G26430 NA non-coding downstream 1002470 30944301 ~ 30945248 (+)
G26429 dnaja4,LOC107659503,LOC104917859 non-coding downstream 1003472 30945303 ~ 30946095 (+)
G26433 NA non-coding downstream 1013807 30955638 ~ 30955893 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 110196 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 205014 29622311 ~ 29724734 (+)
AMCG00007769 acsbg1 other upstream 923369 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 1018182 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 1229686 28682171 ~ 28700062 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 1472323 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 3821682 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 5669151 35610982 ~ 35620801 (+)
AMCG00007889 NA other downstream 6354387 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 7262039 37203870 ~ 37216558 (+)

Expression



Co-expression Network