AMCG00007799


Basic Information

Item Value
gene id AMCG00007799
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 30409031 ~ 30429130 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007799
TCTGTTTCTGGGGGGAAGATATTTGCTGTGACACTGGAGTCAACGCGAGTCCGTCGGATAATAATTATAGTGGCTGTGAGGTGCATAATCCATGGTCACTATTAAAACTATttcgtttgtttgttgattGGTTAAGGCTTACATTATGTTTAATTGAACTGCAAATACTTTAATATGGAGTTAAACTGgGATGTCCCCCCCCACAATGgcactgctgtgtttttctCAAGAGATCTTTATGATAAATACTCCTTGGCTCCCAATATAAAAGAGCTCTGGGCCATTGCACACAGTCCAATAGTAAAATCTGACGAAgttaaaaaagaacagaaaagtgAAAATGATGGCATGCAACGTGAATCCAAGCCTTCAATGGAGCAAGAAGAAAAGCAGGCCACTTATGTTGAAAATGTGGTACCGGAACCAAAAGTACCCTTCCCCTGCTTGTCCAGTCTGACTGAGACTGAACAGAAGATTTATCTGCGACTGTTGACAACTACCAGTCGGAAACTCAAGGACAACGAAATGCAAACTTACCAGCGCTTACAAGAACTAGTGAACAATGAAGTGACTGAGTTTATGAAGTTCCTGCGAAACGTCGCGTGGAGCTGTGCAGAGGATTACAACTGTATTGCAGAAGGGGCTGCCCATTACCTGGAGGAATATTTCAGAGCCTGCAATGAGAAGGTGAAGAATTACCCAGAAGTTTACCTGATTAATGAAATGACCAGCATAACAGGAGGCAAATTTAACCCAGAGTTGTCACTGAATGTGGAGAAAGAATTGCTTGTGCTGgaCATCAGCAGTGATCTGAATGCAGAAaagctttgtttaaaatacaatcctCATGTGTCTTTAACCAGTCTGGCATTTTATACCCTTCTGAACAACCATGGGCCAGACTACACTGATTCCTGGGAACTGCCAGTTTGTGTGAAAATGGTACCTGAGGAAGGTAACGGTTCGAAGAAAGCCATTTTTATCGATTCTCCTCTGTTGAAGAAGGAAATGACAATTAGGGAAAAAAATCGAATTTTCCATGAGGAAAGCATGAACCTCTCATTGAGCAGAAactgtttaaagcacatttctgACGTGATGCTTAGTGACCATTCGTACAATCACCTGGTGTCGTTGACAgacaAGACCCAAAGAAAACCTATATCCTTTGATGACATGGATGTTGATTTTGAGACTGACTTAACAGACCTGGAAACCTTTGGAACATCATCTTCATCCAAGAAGCCCAAAAGCCAAAGcagtccaaaaaaaaaaaagtctgatgTTGCTGGTAAAACACCTGAGGTTTCTCAGCCAAGTACCGAACCACAAAAAATGGAGAAGACATCTGTAAAGTCTGATGAAGTTTTAGAAGACTCCAAAACTTCTGAATCTGAAACAGTCCTCAAAGACCTTACTTCTGCTGATGATAATTCATGGACGGATATAGAGGACACTTCCATGTTAGACAGTACTTTAGAAACAGAGATTAGTGTTATGGATAGAACTAAGTTGTCTAGTGAAAAAGATGATGGAAAGCTGGATACCTCTGGTTCAGCAAAAGTGTCAAGCTTGATGATACCCCCTGCACAGCTGTCAAAACCTGAACCCGGGGCTGCCTTGTTCTCTTCTAGCGTGGATTCGGATGAGGAGCGCTTGGTGATTGATGATGCCCTTTCCCAGGGCAAATCAGGGAAAAGATATATTCCACTACTTTGCAACACCTCCAGTGTGGAGGAGTCTGCTCCAGAACCCATACCAGACACCCCCAGGTCTCCTTCCCCTGAGCCCGAGAGACCGAGCGTGCACAGCCAAGCCACGTCAGATACAAGAGAAACGACAAGAGGGGGCCAAAGACTGGCACCAAAAGTGTCAAAGGACTGTGACCAGCTTGGGCAGATCCTCAAAATGCAGAGTGCCCTTCTTCAGCCCAGGCCAAAGCATCCCCAGGAGCCTTCATCCCCAAAGCCATATGCTGGTAACACTGGCCACTTAGCCGCCACTATTCAGAGCCACCATCAGCAGCTCCTGAAGCCCTCCGTCTCTTCCTTCCTGGAGGCTAGTCAAGGAGGAGGTGCTCCCACTGCTGCTGTGCCCACACCAGCCGACAGCCAGCAGCCTGCAGGGCCTTCTAAGCgACTGCTTCCACATGATCTGTTGTTGAAGGAGGAAAATGAGCTGGATTATGAGACTCCGCAGGAAGGCAATCTTGTGTACAAACTGTACAGTTTGGGAGATGTGCTAATGATGGTGCGAAGCAATGTCAACGCAGCTCAGCCGAAACTCGGGCAGGGCTTTAGCAAGAATATTCCTGTCTATGTTTTGCCTAAGCTGGAGTATCAGACCTGCTATGGAGTGGAAGTTCTCACTAAAAGTGAAGCGTGTCGCTTGTGGGCTGAAAAACTGTTGCATTCCAGCACCACACTCTTCATAGCTCATATCGATGCTCTCACCTCAAAGCTCTTCATGATGGAAGAGTTTACATCGGAAAGAACAGCAGATAAATTTGGTGACTTCAAACCAGCAAATTCCTTGAACATACTTCACCATTTATTGAAAAAGGTTATTGGTTTACAGGAGGGAAGGTACCTATTGAGCCACAAAGCTGGGGAGCCATTAGTCACCATTTTGAAAGCGTCTGATGGAAAGAAGGTGACACGGGCGACTTACAACTTGTATGAAGCTCACAGCACCCAGCCTCTGCCCTGTGCCAGTTCTGTTGTGCCCTGGGTGCCCGTGGACCCATCCCAGCTGCTCCCATTCCACATCAGACAAGGCAGAGTACCCTGCACCTTCCCCCCCAGGCCTGCGGGCAACATGCAGGGCCCCAAGGTGGGTGTggcaaaaggaaagaaaaatagtgCTTGTGCAAGAAAGGCTATTGCCATGGAAATGCAGAATCCTGCCCTGCCAGCACAGCCTGGCGCACAGCAGGGCGTGGCTgccaagaagaaaaagaagaagaagaacaaggggACACGTGCTAAACGAGCTCAGAAGGGAAAGGAGAAAATGAGGCAAAGGAGACTGCAGCAGAAAAACCAGAACACAACTTAACATACAAAATCTTGTCGAAAGTGTAGAAGTTAAATGCAGGAGTAAAACTATTTTTGATTCTGCTCACTGGGGCTCTTGAGATGAAGCTCTTGAATGGAGTTTCTTTAACACCCATTTGGATTtatattttcatctttttttttatgtaagaaAGCTCTTTTGAATATGAATGCAATGTTCCTTCCATTcatcttaaaatgcattttagtaTATTTCTACAGGACATTCTTCATTGAGTGTAGTggtactaaaaataaataatactcaaTTTCCTGCTTTCTGATTTCAAGTCCAGATGAAAAATGTgtgtctatatgtatatatgtgtatatataaatattttcaaaataaagtcTATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007799 True 3416 mRNA 0.44 14 30409031 30429130

Neighbor

gene id symbol gene type direction distance location
AMCG00007798 rora,LOC103141220,LOC106561150 coding upstream 7928 30388193 ~ 30401103 (+)
AMCG00007797 vps13c coding upstream 365850 29945120 ~ 30043181 (+)
AMCG00007796 NA coding upstream 467200 29929748 ~ 29941831 (+)
AMCG00007787 etfa,LOC107712526,LOC107557988 coding upstream 800434 29586473 ~ 29608597 (+)
AMCG00007784 scaper,LOC106561156 coding upstream 923848 29437666 ~ 29485183 (+)
AMCG00007800 anx2a,anxa2,LOC108433632 coding downstream 710 30429840 ~ 30438133 (+)
AMCG00007802 bnip2,LOC107703138 coding downstream 161084 30590214 ~ 30608023 (+)
AMCG00007806 gtf2a2 coding downstream 181088 30610218 ~ 30613192 (+)
AMCG00007805 otud7a,LOC107715690,LOC107659507,LOC107550219,LOC107752330,LOC107698115,LOC107598848,LOC108275340 coding downstream 302481 30731611 ~ 30774461 (+)
AMCG00007809 LOC107674425 coding downstream 453786 30882916 ~ 30915465 (+)
G26319 NA non-coding upstream 2384 30402565 ~ 30406647 (+)
G26262 NA non-coding upstream 605428 29799757 ~ 29803603 (+)
G26249 NA non-coding upstream 667949 29738702 ~ 29741082 (+)
G26243 LOC106587622,LOC106562410 non-coding upstream 679494 29726394 ~ 29729537 (+)
G26196 LOC107575789 non-coding upstream 868969 29539683 ~ 29540062 (+)
G26360 NA non-coding downstream 81405 30510535 ~ 30522510 (+)
G26430 NA non-coding downstream 515171 30944301 ~ 30945248 (+)
G26429 dnaja4,LOC107659503,LOC104917859 non-coding downstream 516173 30945303 ~ 30946095 (+)
G26433 NA non-coding downstream 526508 30955638 ~ 30955893 (+)
G26458 NA non-coding downstream 671141 31100271 ~ 31100516 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 589479 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 684297 29622311 ~ 29724734 (+)
AMCG00007769 acsbg1 other upstream 1402652 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 1497465 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 1708969 28682171 ~ 28700062 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 985024 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 3334383 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 5181852 35610982 ~ 35620801 (+)
AMCG00007889 NA other downstream 5867088 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 6774740 37203870 ~ 37216558 (+)

Expression


Co-expression Network