AMCG00007800 (anx2a,anxa2,LOC108433632)


Basic Information

Item Value
gene id AMCG00007800
gene name anx2a,anxa2,LOC108433632
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 30429840 ~ 30438133 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007800
AGCTTTTCTTTGAGCAGCACAGTAAACTACACCAAGGTGCGTTTCCTTTACCCTTTTGCAGATTGTGCATCATGGCTTTGGTATCTGAGTTCCTGGGACAGCTCACCCTGAATTTTGGTGGGGCTTCTGAACCCAAGTTCCCTACTGTGGTGCCAGCTCCTGATTTTGACCCTGAGAAGGATGCTGCCAGAATTGAGACTGCCATCAAAACAAAGGGTGTGGATGAGCAGACGATTATTGATATTCTGACCAAGCGCAGCTATTCACAGAGGCGTGATATTGCCTTTGCTTATGAAAGGCGGGCCAAGAAGGATATGATCAGTGCTCTGAAAGGTGCCCTGTCTGGATCCCTGGAGTTGGTGATCCTGGGTCTCATGAAGAGCACACCCCAGTATGATGCCTCTGAGCTGAAATCGTCTATGAAGggTCTAGGAACTGATGAAGAAACACTAATTGAACTGATGTGCTCTCGGAGCAGCGACGAACTTTCCGAAATCAAGGCTGTCTACAAGGAATTTTATAAGAAAGATCTGGAGAAGGATGTAGAAGGAGACACGTCTGGGGATTTCAGAAAACTTCTGCTGGCTCTGGTGAAGACACCAAGACAAGCACCCAGCAGTATTGTGGACTATGAGCTGATTGACCAGGATGCCAGAGCCCTCTATGAGGCTGGGGTTAAGAGGAAGGGAACTGATGTTGCCACCTGGATAACCATTATGTCAGAAAGGAGTGTACCCCACCTACAGAAAGTGTTTGACAGGTACAAGAGCTACAGCCCATATGACATGCAGGAAAGCATCCGAAAAGAAGTGAAAGGAGACCTGGAGAAGTCTTTTCTCACCCTGGttcaGTGCTTTGAAAATAAGCAACTGTATTTTGCAAACCGACTCAACGATGCTATGAAGAGCAAAGGAGCCAAGGAGAAGCTGCTGACCAGGATCATGGTGTCCCGCTGTGAGGTGGACTTGATGAAGATCCGATCGGAATACAAGAAGCAGTTTGGAAAATCCCTCTATCAGACCATCGCTGAACACACCAAGGGAGATTACCAGAAGGTTTTGCTGAGTCTGTGTGCAGGGGATGATTAAGCCAAACATTCCTGCAAGACCAGCCTCGTCCTGGTGCCTTACATTCCTGTACTCTCCATAACCTTATCCAGTGCCTATCTTTATAATCCGACATGCCTCTGTATTAGggttattactttgtttttattttaaaaaaacagtcaTCCTTGTTTCagtggaaaagtaaataaatcaaaataactcggtttctttttttattttgtatgtgtaagCATTACTGACTACCTTTGTTCTTGTTACAAAGCTCAGGGACGGTAATTTCCTGACAGAGCAGGTCTGGTTTTATGTGTGGAAGCCATCTGTGATGTCGGGGTGCATTCTAACGAGTTC

Function

symbol description
anxa2 Enables several functions, including S100 protein binding activity; enzyme inhibitor activity; and phospholipid binding activity. Involved in several processes, including negative regulation of low-density lipoprotein particle receptor catabolic process; positive regulation of cellular component organization; and positive regulation of low-density lipoprotein particle clearance. Located in several cellular components, including bounding membrane of organelle; extracellular exosome; and lipid droplet. Part of AnxA2-p11 complex and PCSK9-AnxA2 complex. Colocalizes with membrane raft. Implicated in osteonecrosis. Biomarker of cholangiocarcinoma; invasive ductal carcinoma; pancreatic ductal carcinoma; and paranasal sinus benign neoplasm.

NR:

description
PREDICTED: annexin A2-like

GO:

id name namespace
GO:0043086 negative regulation of catalytic activity biological_process
GO:0005509 calcium ion binding molecular_function
GO:0005544 calcium-dependent phospholipid binding molecular_function
GO:0004859 phospholipase inhibitor activity molecular_function
GO:0008092 cytoskeletal protein binding molecular_function

KEGG:

id description
K17092 ANXA2; annexin A2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007800 True 1418 mRNA 0.46 13 30429840 30438133

Neighbor

gene id symbol gene type direction distance location
AMCG00007799 NA coding upstream 710 30409031 ~ 30429130 (+)
AMCG00007798 rora,LOC103141220,LOC106561150 coding upstream 28737 30388193 ~ 30401103 (+)
AMCG00007797 vps13c coding upstream 386659 29945120 ~ 30043181 (+)
AMCG00007796 NA coding upstream 488009 29929748 ~ 29941831 (+)
AMCG00007787 etfa,LOC107712526,LOC107557988 coding upstream 821243 29586473 ~ 29608597 (+)
AMCG00007802 bnip2,LOC107703138 coding downstream 152081 30590214 ~ 30608023 (+)
AMCG00007806 gtf2a2 coding downstream 172085 30610218 ~ 30613192 (+)
AMCG00007805 otud7a,LOC107715690,LOC107659507,LOC107550219,LOC107752330,LOC107698115,LOC107598848,LOC108275340 coding downstream 293478 30731611 ~ 30774461 (+)
AMCG00007809 LOC107674425 coding downstream 444783 30882916 ~ 30915465 (+)
AMCG00007808 rps27,LOC104929087,LOC106605899,LOC108429942,LOC107084035,LOC100696027 coding downstream 503066 30941199 ~ 30943727 (+)
G26319 NA non-coding upstream 23193 30402565 ~ 30406647 (+)
G26262 NA non-coding upstream 626237 29799757 ~ 29803603 (+)
G26249 NA non-coding upstream 688758 29738702 ~ 29741082 (+)
G26243 LOC106587622,LOC106562410 non-coding upstream 700303 29726394 ~ 29729537 (+)
G26196 LOC107575789 non-coding upstream 889778 29539683 ~ 29540062 (+)
G26360 NA non-coding downstream 72402 30510535 ~ 30522510 (+)
G26430 NA non-coding downstream 506168 30944301 ~ 30945248 (+)
G26429 dnaja4,LOC107659503,LOC104917859 non-coding downstream 507170 30945303 ~ 30946095 (+)
G26433 NA non-coding downstream 517505 30955638 ~ 30955893 (+)
G26458 NA non-coding downstream 662138 31100271 ~ 31100516 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 610288 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 705106 29622311 ~ 29724734 (+)
AMCG00007769 acsbg1 other upstream 1423461 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 1518274 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 1729778 28682171 ~ 28700062 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 976021 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 3325380 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 5172849 35610982 ~ 35620801 (+)
AMCG00007889 NA other downstream 5858085 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 6765737 37203870 ~ 37216558 (+)

Expression


Co-expression Network