AMCG00007803


Basic Information

Item Value
gene id AMCG00007803
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 30619418 ~ 30639376 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007803
CCAACCCCCATACACAAACTGGTCGAGCGAGTTCAAGCGTTCAATCCCTGGTGCTCAACTAGGGATGCACACCTGCGGGAGCTTCAACTCGCCGACTGCCGTCATTTATCGTCACTAAAAGCTCTTGTTTTTGCGTGAATGTTAAAGAAGACATGGAGGTTAACACTTTCCAAGCACTGCTTTTGGTGGTTTTCTGCGGATTTGCGCACAGTAAACCTGCGTCGCTGTCCTGTCCCGGCGGGCAGTTTGCGTTGAAGCAGCAGTGCGTCGGCTGCCATCCTACCTGCGCTGAATGCGTCGGTCATGAGCTGTTTGAGTGCACAACCTGTGGAGTGGATGAAGACGGATTGGAGCGGTTTCTGCACCGAGGCCGCTGCAGGCTGCACTGCCCCCGGGGTTACTACCCAGACCGGAATCTGTACACCTGCGAGTCCTGCATGCCCAACTGTGAGATCTGCACTGATGCCGATGTCTGCGCCAAGTGCCAAGAAAGTTACAAACTCCAAAATGGAATCTGCCAGGCAGCTGAGTGTGAAGAAGGCCAAGTCCAAGACCCTGAAACTGGAGAATGCTTTGACTGTGAAGCTGGATGTAAAACATGTTCAACAGATGACCCTGAGCTCTGTAACAGCTGCATGGAAGGATATTTTCTCTACAGACACCAGTGTCGCCGGCGCTGCCCACAAAAGACCTATGAGGATGTTGGGAGGAAAATTTGCTTTAGCTGCCCAGTCCCCTGCACTGACTGCTTTAGTGAGTCTCTCTGCCTTGCCTGTCAGCCTGGCCATTTCTTGACTGAGGGAGGTTGTGTAAAGCAATGCCCTGATGGCACCTACGGGGACACAAACGGCTGGCGCTGCGAGGCCTGTCACAGCTCCTGCCAGAGCTGCCATGGCCTGCTGGTGAAGGACTGTGATGTATGCCCTGATGGGAACCTTCCTCTGTACGGTCAGTGTCCTGCTGCCAGCTGCCTGGAGGGACAGTATTTTGATGCAACCGATGCAAAGTGCTATGCATGTGACATTTCCTGCAAGACCTGCTTTGGGCCTCAAGCTCTGGACTGCTCCTCATGCTTTACAGGCTATCTACTGGACCAGGAGGGCTCCTGTGTGGAGCACTGCCCTGCTGGGTACTTTGTTAAGTCTGAAAGCCAGCTGTGTGAGGAGTGCTCTCCCAACTGTGAGACATGCGAGGAGACTAGTGACACGTGTGTCAGCTGTAAGAAAGGCAAATACAGACTCTTCCTTCATGAAGGGAAGTGCTGGTCAAATTGCCCAGAAGGTTACTTTGAGAGAGTGGAAGGCACATGTGAGGCCTGTGATGACTCCTGTCTTACATGTGACGAAAACAAGTACAAGTGCCTGTCTTGTGTGAAGGGGCTGTACCTGGAGAATCACCAGTGCAATGGCAACTGCTCCTTCGGGAGCTACCCTGCCGAGGATGGGACCTGCAGCCGCTGCTCTGCTCACTGTGATGTCTGCACTGACGCCAACACCTGTATGAAATGCAGTTTTTTGTACCTGCTTCTCAATGGTGTCTGCAAAGCAAATTGTCCTGATGGTTACTATGAGGACCTGGACAAAGGCAAGTGTGTTCCATGCCACCCTACCTGTGCCACCTGCTCGGGGCCAGAGACGGATGATTGTGAGAGCTGCTCACTGCAATATCCCAGGCTGTACGATGGTCGCTGCTCTGAGGACTGTCCTCCAGGAACCTATTATGAGATTTCAGCCAGTGAATGTCAGGAGTGTGACCTGACCTGTGCCAGCTGTTTAGGCCCAGAGGCAACACAGTGCATTAAATGTAAGGAAGGCTTGGCACTAGATCAAGAAACCAGGATGTGTGGTGTCACCGGTGACTCCAACTGCCCCCCCAAAATGTTTCTTCATGAAGATCGTTTCACTTGCAATGCTTGTCACCGCCAGTGTGAATCGTGTGTGGGCCCTGCTGACACAGACTGCCAGACCTGCGCAGTGCCCAGTTACTTGTACAATGGCACATGTGTGACGGGATGTCCTGGGGGCACCTTCCAGTCCAGTGAGGAGGCAGACAGAGTGGAGCTCGGTTTCTGTTCGGTGTGTGACCATGTCTGTGACACCTGTACTGGGGCCTCGCCCAAGGACTGCATCACTTGTTCTTCAGGCTATTTAAAATTCCTTCACCTCTGCATCTCCCACTGTCCCACAGGGTACTATCGTGAGAAGACTCGATGTGAGAAATGTGACTCTTCCTGTGGCCGCTGCTCTGGCCCTGGCATTAAGTCCTGCCTggcctgccccccccacctgcTGGAACTGGAAAGTACCAAACTCTGTGTAGAGCACTGCCCTCAGCGATTCTACCAGCAGGACCACAAGTGCAGACAGTGCCACACTAGCTGTAAAACTTGTAAAGATGCCACCCCTCAGGGATGTCTTACCTGTGACAGGGGCAGTACCCTGCAGGATGGGATCTGTTACCCTCGCTGTGAAGAAAGGCATTACTTCTCTGAGGATgAGCTTTGTAAGCTATGTGATCCCTCCTGCAGACACTGTTCAGGCCCGGGCCCACATCAGTGTTTGACATGCAAGCCTAACTTCAGTCTTCATCCTCTGGAAAACCGGTGTGATAGATGCTGCGAGTCAAAGCTCAACAATACTAACTGCTGCCACTGTAGTACCAACTCAGCGCTTTGTGTAGAGGTCTCCTTCCCCATGTCGGAGCACACTCTTCTATCTGGGAAGGCAGACTCTCAGATGCCAAGTCACGCATCCATAGCACTGCCTGCCCTGCTGGTGCTGGCCCTGGTGTTGGGGCTAGCCATGTTCGCACTCTTCCAGGCCAGGGCGAGGAAGAGACTGTGCTGGAAACAGAGCTATGAGAGACTGAGTGGCAGTGCTAAggctgccccccccacctctaCCATGCTCCATGGCGTCCCGGGCCCCGAGGACAGCGGTGACGAGACTGATGTGGTTTACACCAGCAGGGATGGCACGGTCTACCGACGCTACAACTTCATCAAGGCTGAGGATGGAGAGGATGACAATGAAAACACTTACTTGAGCAAATCTTAGGGCCAAGATCTGTGTGAAATGTGTAGTGGTTTGCTGAATACGTGCCTTCAGTAGGAACATGATGCTTCACACACAAATTCATATTTAGAAAGTAATTTTTGTATGATGCTTCATCTTTTTGATAATTTGAGGATGTATCCTAAATAAAAAGATTACAGAAACCATACCTTTATCTAGTACTTTGGATATGATCTAACCACTATGGA

Function

GO:

id name namespace
GO:0008094 DNA-dependent ATPase activity molecular_function

KEGG:

id description
ko03440 Homologous recombination
ko03460 Fanconi anemia pathway
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007803 True 3262 mRNA 0.52 16 30619418 30639376

Neighbor

gene id symbol gene type direction distance location
AMCG00007804 NA coding downstream 4533 30613989 ~ 30614885 (-)
AMCG00007801 foxb1,LOC103353681 coding downstream 109916 30508882 ~ 30509502 (-)
AMCG00007795 LOC103354956,LOC102781786,LOC102208509 coding downstream 754807 29799746 ~ 29864611 (-)
AMCG00007793 tpm1 coding downstream 844465 29765938 ~ 29774953 (-)
AMCG00007792 tpm1 coding downstream 853563 29757456 ~ 29765855 (-)
AMCG00007807 NA coding upstream 171418 30810794 ~ 30830616 (-)
AMCG00007810 rab8b,LOC106609700,LOC107585968,LOC108441837 coding upstream 276984 30916360 ~ 30924500 (-)
AMCG00007811 dnaja4,LOC108229883,LOC107099226 coding upstream 305236 30944612 ~ 30947926 (-)
AMCG00007812 rasgrf1,si:ch211-234p18.3,LOC107690363,LOC107709805 coding upstream 323668 30963044 ~ 30982020 (-)
AMCG00007815 NA coding upstream 464402 31103778 ~ 31111738 (-)
G26370 NA non-coding downstream 7725 30610218 ~ 30611693 (-)
G26342 NA non-coding downstream 164790 30404998 ~ 30454628 (-)
G26352 anx2a,LOC105029377,LOC108433632 non-coding downstream 181430 30431806 ~ 30437988 (-)
G26231 NA non-coding downstream 1010822 29608317 ~ 29608596 (-)
G26165 NA non-coding downstream 1253173 29365624 ~ 29366245 (-)
G26403 NA non-coding upstream 161035 30800411 ~ 30875378 (-)
G26416 NA non-coding upstream 264293 30903669 ~ 30903895 (-)
G26598 NA non-coding upstream 1046395 31685771 ~ 31686432 (-)
G26626 NA non-coding upstream 1142262 31781638 ~ 31781891 (-)
G26646 NA non-coding upstream 1183366 31822742 ~ 31822969 (-)
AMCG00007768 NA other downstream 1605471 29001049 ~ 29013947 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other downstream 1698295 28894693 ~ 28921123 (-)
AMCG00007704 NA other downstream 3248899 27357731 ~ 27370519 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other downstream 4548570 26053764 ~ 26070848 (-)
AMCG00007684 shf,LOC108430988 other downstream 4987826 25630792 ~ 25631592 (-)
AMCG00007817 NA other upstream 552634 31192010 ~ 31246649 (-)
AMCG00007822 NA other upstream 699340 31338716 ~ 31342792 (-)
AMCG00007835 LOC107594750 other upstream 1165523 31804899 ~ 31816151 (-)
G26961 LOC101154678 other upstream 4230059 34869435 ~ 34869807 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 5363817 36003193 ~ 36010995 (-)

Expression


Co-expression Network