AMCG00007804


Basic Information

Item Value
gene id AMCG00007804
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 30613989 ~ 30614885 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007804
ATGTTCGAGAGACTTCTTCGTGCCATATACACCCCTCAGAATGTGTACTGTGTACATGTGGACCAAAAATCTTCAACTGACTTCAAGAATGCCGTGAGGGCCATTGTGTCCTGTTTGCCGAATGTGTTTGTGGTGAAAAAGCTGGAAAAGATAGTCTACGCATCGTGGTCGAGGGTGCAGGCTGACCTGAACTGTATGGAAGATTTGCTCAACTCAACGGTACAATGGAGATATCTTCTAAATACCTGTGGGACCGATTTTCCAATAAAAACCAACGCGGAAATAGTACAGACCCTTAAATTCCTGAATGGCAAGAACAGCCTTGAATCGGAGCCTCCACCACAGCACAAGAAAGACCGTTGGATTTACCATCACGAAGTCAAAGATTCCATAACCAGGACGGAAACCAAGAAGATCCCCCCACCTATCGACTCTCCCATGTTTGCTGGCAACGCTTATTTTGTTGTCACTCGTGAATTTGTCCAATACCTATTTGAAAATCCCAAGGTGCAGAATCTACTGGAATGGTCAAAGGACACGTACAGCCCGGATGAACATCTCTGGGCGACTTTACAGAGAATGCCTGGAGTACCAGGATCCATTCCCAGCAATTCCAAATTTCACACCACGGATTTGCAGGCCATAGCTCGACTAGTAAAATGGGAGTATTTTGAAGGCGACACAAGGAAAGGGTCACCCTATCCACGTTGTTCTGGCATTCACCGGAGAGCAGTGTGCGTCTATGGTAGTGGGGACCTCCATTGGATGCTACCTCAGCACCATCTATTCGCGAACAAATTTGACCCTGAAGTGGATGACGTTGCCATCAAATGCCTAGAGGTGCACCTTCGTGACAAAGCAGTCAATGGCAAGAGACTAGGGACAATCTTGAGTTAA

Function

GO:

id name namespace
GO:0006814 sodium ion transport biological_process

KEGG:

id description
ko04614 Renin-angiotensin system
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007804 True 897 mRNA 0.47 1 30613989 30614885

Neighbor

gene id symbol gene type direction distance location
AMCG00007801 foxb1,LOC103353681 coding downstream 104487 30508882 ~ 30509502 (-)
AMCG00007795 LOC103354956,LOC102781786,LOC102208509 coding downstream 749378 29799746 ~ 29864611 (-)
AMCG00007793 tpm1 coding downstream 839036 29765938 ~ 29774953 (-)
AMCG00007792 tpm1 coding downstream 848134 29757456 ~ 29765855 (-)
AMCG00007790 NA coding downstream 863410 29738738 ~ 29750579 (-)
AMCG00007803 NA coding upstream 4533 30619418 ~ 30639376 (-)
AMCG00007807 NA coding upstream 195909 30810794 ~ 30830616 (-)
AMCG00007810 rab8b,LOC106609700,LOC107585968,LOC108441837 coding upstream 301475 30916360 ~ 30924500 (-)
AMCG00007811 dnaja4,LOC108229883,LOC107099226 coding upstream 329727 30944612 ~ 30947926 (-)
AMCG00007812 rasgrf1,si:ch211-234p18.3,LOC107690363,LOC107709805 coding upstream 348159 30963044 ~ 30982020 (-)
G26370 NA non-coding downstream 2296 30610218 ~ 30611693 (-)
G26342 NA non-coding downstream 159361 30404998 ~ 30454628 (-)
G26352 anx2a,LOC105029377,LOC108433632 non-coding downstream 176001 30431806 ~ 30437988 (-)
G26231 NA non-coding downstream 1005393 29608317 ~ 29608596 (-)
G26165 NA non-coding downstream 1247744 29365624 ~ 29366245 (-)
G26403 NA non-coding upstream 185526 30800411 ~ 30875378 (-)
G26416 NA non-coding upstream 288784 30903669 ~ 30903895 (-)
G26598 NA non-coding upstream 1070886 31685771 ~ 31686432 (-)
G26626 NA non-coding upstream 1166753 31781638 ~ 31781891 (-)
G26646 NA non-coding upstream 1207857 31822742 ~ 31822969 (-)
AMCG00007768 NA other downstream 1600042 29001049 ~ 29013947 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other downstream 1692866 28894693 ~ 28921123 (-)
AMCG00007704 NA other downstream 3243470 27357731 ~ 27370519 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other downstream 4543141 26053764 ~ 26070848 (-)
AMCG00007684 shf,LOC108430988 other downstream 4982397 25630792 ~ 25631592 (-)
AMCG00007817 NA other upstream 577125 31192010 ~ 31246649 (-)
AMCG00007822 NA other upstream 723831 31338716 ~ 31342792 (-)
AMCG00007835 LOC107594750 other upstream 1190014 31804899 ~ 31816151 (-)
G26961 LOC101154678 other upstream 4254550 34869435 ~ 34869807 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 5388308 36003193 ~ 36010995 (-)

Expression


Co-expression Network