AMCG00007816


Basic Information

Item Value
gene id AMCG00007816
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 31096738 ~ 31098357 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007816
ATGGGGGATATGATGGAGCTGCGGACAGACGGGAACTCCCTGCTGAAGGCGGTGTGGCTGCGGAGGCTGAGACTCACCCGGCTGCTGCTGGAGGGGGGGGCCTATATCAACGAGAGCAACGAGAGAGGCGAGACGCCACTCATGATCGCCTGTATGTCCAAGCACACTGACCAGCAGAGCGTCAGCAAAGTCAAAATGGCCAAGTACCTGCTAGAGAACAAAGCTGATCCCAACATCCAGGACAAGATGGGCAGGACGGCCCTGATGCACGCCTGCAGTGAGAGGGCTGGCCACGAGGTTGTGGCCCTGCTGCTGGTGAACGGCGCCGACCCCAGCTTGGAAGACCGCTCAGGGGCCTCGGCGCTCGTCTACGCCATAAATGCAGATGATAAGGAGACACTAAGGCTCCTCTTGGATGCCTGCAAAGCCAAGGGCAAAGAGGTCATCATCATCACTACTGACAAGTCTCCCTCTGGCACCAAAACCACAAAGCAGTACCTGAATGTTCCGCCCTCCCCCGAGCTGGAAGAGCGCTATTCCCCGGCACTCTGCACCTCCCCCTCCGACATTGACCTCAAAACGTCCCCCTCACCTACCACCGAGAAGCAGCATGAGTCCATATTCAGCTTCCAGAGCAAACGCTCGGGGGGGTGTGGCAGTACTGCCCCCAGTGTGGTCACCAAACTACCCACCGAGCCCGTCTCCCCCACCAGGAAGCTCTGCAACCCGAAACGAGCACGACTGCCCCAGCTAAAGCGACTGCAGTCAGAGCCCTGGGGACTGATTGCGCCATCCGTCCTAGCGGCAGCAGCGGCATATGAGGAGAATAAGAGGGCCATGTCAGATGAGGATGTGGTGGTGGGAGCCATGAACGGGCTGTCCCTCCCCAAGAGAGCGCCTTTGTCGCGGCACAACAGCATAGAAAGTAAAGAGGGTCCATCTTCCTTTCCCACAGTGGGGGACCAGTCTTCGATGACGTCTTCGACACCAGCATCCCGGAAAACATCTTATGAGAAATCACACGCCCAGCATCAACCCTTGGCGCGGCGCAGCACCGTGCCCACAGAACAAGACAACACTGGTCACTCTGCCTCCGGTCCCGCCAGCTTAAGGGATACAATGTACAGGAGGCGGCTGGGCAACGAGCATTACGATTCAGACTCCCAGTTGTACTCAGACTCAGCCTCAGGCTCGCTGGATTCGGCCAAGGTTCCCATGGAAAGGAGGAAACACAACACATCCCCCTTGACACTACTCACAAGCTCTCGGGAGTCTTTAGACAGCATTCCCAGCACATCCCCAGGCACGGCACGCCGCAGGGCCCCAGGTCTTCTGGAGAGACGTGGTTCCGGGACCCTGTTGCTGGACCACATATCCCACACTCGCCCAGGATACCTGCCACCTCTGAACAtcaaccccaacccccccatccCGGACATCAGAGCAAGCAGCAAACCCTCCTCCCCTCTCACCACCTGCGTCAGGTCCATAGTTCCTGTAGCACCCAGCTCACCAAAGAGAAGCGACCTGAAGTCCAAAAAGAAACTAGTGAGGAGGCATTCTATGCAAGTCGAACAAATGAAACAGCTCTCTGATTTCGAGGAACTTGCCATCCAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007816 True 1620 mRNA 0.58 1 31096738 31098357

Neighbor

gene id symbol gene type direction distance location
AMCG00007808 rps27,LOC104929087,LOC106605899,LOC108429942,LOC107084035,LOC100696027 coding upstream 153011 30941199 ~ 30943727 (+)
AMCG00007809 LOC107674425 coding upstream 181273 30882916 ~ 30915465 (+)
AMCG00007805 otud7a,LOC107715690,LOC107659507,LOC107550219,LOC107752330,LOC107698115,LOC107598848,LOC108275340 coding upstream 322277 30731611 ~ 30774461 (+)
AMCG00007806 gtf2a2 coding upstream 483546 30610218 ~ 30613192 (+)
AMCG00007802 bnip2,LOC107703138 coding upstream 488715 30590214 ~ 30608023 (+)
AMCG00007813 idh2,LOC107714782,LOC107691122,LOC107715227 coding downstream 13288 31111645 ~ 31136247 (+)
AMCG00007818 LOC106573467,LOC106561177 coding downstream 172318 31270675 ~ 31302984 (+)
AMCG00007820 NA coding downstream 206679 31305036 ~ 31317396 (+)
AMCG00007819 NA coding downstream 226725 31325082 ~ 31339183 (+)
AMCG00007825 NA coding downstream 397582 31495939 ~ 31497811 (+)
G26433 NA non-coding upstream 140845 30955638 ~ 30955893 (+)
G26429 dnaja4,LOC107659503,LOC104917859 non-coding upstream 150643 30945303 ~ 30946095 (+)
G26430 NA non-coding upstream 151490 30944301 ~ 30945248 (+)
G26360 NA non-coding upstream 574228 30510535 ~ 30522510 (+)
G26319 NA non-coding upstream 690091 30402565 ~ 30406647 (+)
G26458 NA non-coding downstream 1914 31100271 ~ 31100516 (+)
G26461 NA non-coding downstream 5597 31103954 ~ 31106021 (+)
G26462 NA non-coding downstream 8057 31106414 ~ 31106624 (+)
G26463 NA non-coding downstream 8357 31106714 ~ 31107249 (+)
G26483 NA non-coding downstream 119753 31218110 ~ 31218322 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 1277186 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 1372004 29622311 ~ 29724734 (+)
AMCG00007769 acsbg1 other upstream 2090359 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 2185172 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 2396676 28682171 ~ 28700062 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 315797 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 2665156 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 4512625 35610982 ~ 35620801 (+)
AMCG00007889 NA other downstream 5197861 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 6105513 37203870 ~ 37216558 (+)

Expression


Co-expression Network