AMCG00007820


Basic Information

Item Value
gene id AMCG00007820
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 31305036 ~ 31317396 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007820
ATGGGGCCTTCTCATTTTTCCTTGCTCTTGATTCTGGCCGGCTGCTGGGAGGCACTGGGAGCAGAGCACTACAGTAACTCCCCTGTCTGCAACACCACCCTGTCTAACGGATCCTTTCCATGGACGCATTACAGGCTTCCAACCAGTGTTGTACCTGAACATTACTACATTTACATCCATCCAGACCTCAACACCAAAACCGTAACTGGTTACGTTCAAATTCTGATCGAGGCTTTGAATGACACCAGCTACATCGTGCTGAACGGCAAGAATCTGACCATCACGGGGGCTTTTCTTAAGGAGCTGAGCCCAAACTACCAGCGGAAGAGGCTCGCCCTTCATGTGCTGGAGTCCGTGCCCACCGAGCAGCTGGCCTTTATTTCTGAGATACCTCTGGTGGCAGGGAGGAAGTACCAGTTGTCTGTCAGATTCTGTGCCACACTCTCCAACAGCTTCTCTGGGGTTTACAGAGCCTCCTACTGGACAAAGAATGGGATCTCAAGAATGATAGCGGCGACTCACTTTGAGCCAACCTCAGCCAGGAAAGCTTTCCCATGCTTTGATGAACCAAACATGAAGGCAGTGTTTTCTGTTGTCATCGTCCGGGACTACAATCGCAAGGCCATCTCCAACATGCCAAAGGTCTCTACAAGGACAAGGGGAGACGGGCTGCTTGAGGATCACTTCTGTCACAGTGTGAGGATGAGCAGCTACTTGGTGGCCTTTGTTGTGAATGACTTTTCCTCCAACAGCACAAAATCGAAAACAGGCACTGAGGTATCTATCTTTGCCCCTAGAGACCAGATCAACCAGACTCGCTATGCTCTGCAAGCTGCTGTAAAGATCTTGGAGTTCTTTGAAGAATACTTCCAGATTCCATACCCTCTTCCAAAAATAGACCTGGTGGCTATACCCGATTTTGAAGCAGGTGCCATGGAGAACTGGGGCTTGATCACTTACCGGGAGACCTCCCTGCTGTACGACCCTCACACCTCCAGCCCTCACAGCAAACTGTGGGTCACTCTGGTCACTGCACATGAGCTCGCGCACCAGGCAAGTGAGACCCCAAGACAATTAACTGTATGGTTTGGGAACTTGGTTACCATgcagtggtggaatgacctctGGCTGAATGAGGGCTTTGCCAGCTACATGGAGTATGTTGCCACCAATCACCTGGAGCCCAGTTGGTGTGTGGAGGACCAGCTGCTCACAACAAGTGTCTACAGAGCGCTGGAGAAGGATTCCTTCATGACCTCTCATCCCATCTCTCTGCCAGTGAAGAACTCGCAGCAGATCAGACAGATGTTCGATGTAGTCTCCTACTGCAAGGGTGCCAGTATACTGAGAATGCTTCATAACTACCTGACCGAGGATGTGTTCACTCAGGGGATTCGAGACTATTTAAAGCAGCACAGCTACAAAAACGCACAGCAGGATGACCTGTGGGAAGCGCTGGAAAAGagtgCATTGAAAGAGGAAAGGAAGGTGGAAGTGAAAGCTATCATGGACACCTGGACAACTCAAAAGGGCTACCCTCTAGTGTCTGTGAAGGTTGATGGAAGGAAACTAAAACTCCACCAAGATATCTTCAGTCTTTACCCCGAGAATGGCAAGAGCTTCCTGTGGCAGATTCCATTTACTTTTTATACAAGCAATTCACCGTCTGTCATCACTCACCtaatgagaaagagagaagAGACCATCGATCTTCATCATGATGTGGCCTGGATCAAAGCCAATGTCAACTCTACTGGCTTCTACAGGGTGTCCTATGATCCCCACACCCTGCATGTCATCATCAGACAGCTGCAGGAGAGCCACACTGTGTTTAGCAAAGCTGACAGGGCCAGTCTGATTGATGATACCTTTCATCTCGCCAGCCAGGGCTCAGTGCAGTTCAGCGATGCGTTTGCGCTCTGCCTGTTCGTGAAGGAGGAGAGGGAGTACCTGCCCATAAGGATGTTTATGGCTCACATTGGAAAGATGATGAGCAAGTTCTCCTTCAGCAGACAACGTTGTGCTCTCGGCCTGCTCAAGGATCACCTGTGGACCCTCCTAGGGGGGCTAATCCAGGCCCAGCACTGGGAGGAGGGAGGCTCCCTGTCCCAGCAGAAGCTGCGGACGCTCCTGCTGGCCACCGGCATCGGGCTGCACTCCCCATCTTCTAGACAGCGGGCACAGGAGCTCTTCCACCACTGGATGGCAGCTGATGGGAAAATCCAGCTGCCCAGGATGCTGCGAGGGCTGATCTTCCGCATGGGCATCAGGAGAGGCGGGCACCGGGAGTGGATGTTCTTACTGCAGCAATACCTGCGCACCGTCTCCAGCTCCGACAAAGTGCTCCTCCTGTCGGCGCTGTCCCGCACACGCAATCCCAACAAGAGGAAGTTGCTCGAAACAGCACTGCAGAACCGCTTGATAAAGATTCAGGACTTTGCAGTTATAGTTGGTCAGCTGGCCAACAGTGTGGAGAGCAACGAGCTGGTGTGGAGATTTGTGAGACACCACTGGGATGAGCTGCAGAACAAATTTTCTTTAGGTTCCTCTTATCTGTCCCGTATTGTTGTCTCCATTACATCTAAGTTCAACTCCAAGGAGAAATATGAAGAAGTGTggaagttctttgtttctgagAAGAAGCTTGGAGGTCTTGCCTTTGTCAAACAGTCCCTGGAAATTATCAAAGTCAACATGCTATGGCTGCAGAGAAACATGAGGCCGGTCAAGGCTTGGCTTCAGCAGCAGTATCCGCACACATATGCCACATACAGTCACTGCAGAACCAAGGTCTCATATCGCTTTGTTTGGGGAGCAGCAATACACATTCGTTATTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007820 True 2838 mRNA 0.51 17 31305036 31317396

Neighbor

gene id symbol gene type direction distance location
AMCG00007818 LOC106573467,LOC106561177 coding upstream 2052 31270675 ~ 31302984 (+)
AMCG00007813 idh2,LOC107714782,LOC107691122,LOC107715227 coding upstream 168789 31111645 ~ 31136247 (+)
AMCG00007816 NA coding upstream 206679 31096738 ~ 31098357 (+)
AMCG00007808 rps27,LOC104929087,LOC106605899,LOC108429942,LOC107084035,LOC100696027 coding upstream 361309 30941199 ~ 30943727 (+)
AMCG00007809 LOC107674425 coding upstream 389571 30882916 ~ 30915465 (+)
AMCG00007819 NA coding downstream 7686 31325082 ~ 31339183 (+)
AMCG00007825 NA coding downstream 178543 31495939 ~ 31497811 (+)
AMCG00007826 NA coding downstream 191275 31508671 ~ 31509949 (+)
AMCG00007833 hcn4,LOC102793391 coding downstream 217933 31535329 ~ 31536009 (+)
AMCG00007832 hcn4,LOC108263998,LOC102197830,LOC105930179 coding downstream 239039 31556435 ~ 31559455 (+)
G26483 NA non-coding upstream 86714 31218110 ~ 31218322 (+)
G26463 NA non-coding upstream 197787 31106714 ~ 31107249 (+)
G26462 NA non-coding upstream 198412 31106414 ~ 31106624 (+)
G26461 NA non-coding upstream 199015 31103954 ~ 31106021 (+)
G26458 NA non-coding upstream 204520 31100271 ~ 31100516 (+)
G26625 NA non-coding downstream 464242 31781638 ~ 31781891 (+)
G26645 NA non-coding downstream 505344 31822740 ~ 31822973 (+)
G26698 NA non-coding downstream 1304864 32622260 ~ 32622530 (+)
G26704 NA non-coding downstream 1570394 32887790 ~ 32888040 (+)
G26826 NA non-coding downstream 2671650 33989046 ~ 33990588 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 1485484 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 1580302 29622311 ~ 29724734 (+)
AMCG00007769 acsbg1 other upstream 2298657 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 2393470 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 2604974 28682171 ~ 28700062 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 96758 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 2446117 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 4293586 35610982 ~ 35620801 (+)
AMCG00007889 NA other downstream 4978822 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 5886474 37203870 ~ 37216558 (+)

Expression


Co-expression Network