XLOC_006011



Basic Information


Item Value
gene id XLOC_006011
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 26802494 ~ 26809319 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00013400
cttgtattttgtaaatataaaaagttaGGGAAATGTCCTTCCTAGGTCAAAGTTCAAAGAAGAAACAAAGCTGCACATGGGAGGAAGAAAATTCAACATCACAAAATCCTGTTTCACCTCTTCTCGCTCTAAAAGACTGAGTTTCATGCTTGTTTGGTCATACGGCACACGCAGAGCTGCTTCCTGAAGGTGGTCAACATGCAGGTCAGTGTGGTGTGGTTTCGTTTTCTGATTTGACCTCTGCTGACCTC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00013400 True 251 lncRNA 0.42 2 26802494 26809319

Neighbor


gene id symbol gene type direction distance location
XLOC_006010 fancl coding upstream 21697 26703897 ~ 26780797 (+)
XLOC_006009 NA coding upstream 737230 26056457 ~ 26065264 (+)
XLOC_006008 NA coding upstream 819129 25965727 ~ 25983365 (+)
XLOC_006007 NA coding upstream 841125 25944279 ~ 25961369 (+)
XLOC_006006 bcl11aa coding upstream 877270 25846528 ~ 25925224 (+)
XLOC_006012 soul2 coding downstream 231568 27040887 ~ 27043334 (+)
XLOC_006013 slc24a3 coding downstream 264582 27073901 ~ 27210001 (+)
XLOC_006014 BX323884.1 coding downstream 407322 27216641 ~ 27232573 (+)
XLOC_006015 rin2 coding downstream 423375 27232694 ~ 27296949 (+)
XLOC_006016 slc17a5 coding downstream 489354 27298673 ~ 27313556 (+)
XLOC_006005 NA non-coding upstream 1019683 25769999 ~ 25782811 (+)
XLOC_005997 BX530079.1 non-coding upstream 1357971 25443984 ~ 25444523 (+)
XLOC_006019 CR354610.2 non-coding downstream 554630 27363949 ~ 27391937 (+)
XLOC_006021 NA non-coding downstream 975775 27785094 ~ 27805880 (+)
XLOC_006022 dre-mir-30e-2 non-coding downstream 985811 27795130 ~ 27795209 (+)
XLOC_006024 NA non-coding downstream 1454917 28264236 ~ 28282323 (+)

Expression



Co-expression Network