AMCG00007840


Basic Information

Item Value
gene id AMCG00007840
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 32205006 ~ 32219672 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007840
ATGCCAATGTTTTACAGGAGGCTGGATGACGTTTTGTTCAACTGTAGCTGTGACATCCGCTGGATCCAGCTGTggcagcagagaggagaggcagGGCTCCACACCCAGCAGCTATTCTGCATCAACAGCGATTCACAGAAGATCCCCTTATACAATATGAATATCACTCACTGTGATTTGCCAGAGATCAGTGTGAGTCACAGCAACCTGACAGTGATGGAGGGAGACAATGCCACTGTTACCTGTAATGGGTCAGGGTCTCCCTTGCCAGATGTGGACTGGACTGTCAAAGAGCTACACTCTATCAACACACACCAGACCAATGTGAACTGGCCGAATGTCCACTCTATCAATTTGACACTGGTCAATGTGAGCAGGGAGGACAACAGCTTCATGTTAAACTGCATAGCAGCGAATGTGGTGGGGATGACCAATGCTTCAATCCAGCTTTCAGTCCTCTTTCCCCCCCGTATTCTGAAGCTGATGGAGCCTGAGAGACGCCATGATACCTGCATTGAGTTCACAGTGCATGGCAACCCACAGCCCACCCTTCGTTGGCTGCACAAAGGTGTAGAGATCAAACAAAATGAGTTTGTCCGCACTGAAATGGTCTACTACCAGGACCTCCAGGAGGGCTGTTTGAATTTCAAGGACCCCACACACTTTAACAATGGCAACTACACACTGGAGGCCATCAACTCCTTCGGCACAGTCTCTAAGACTGTCTATGCCCACTTCCTGCACCCCCCATTCAGCAATGAGGTGGCCTATGATGGTATGTACCTTGATACATTTTCTCCAtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007840 True 804 mRNA 0.49 4 32205006 32219672

Neighbor

gene id symbol gene type direction distance location
AMCG00007838 NA coding upstream 386014 31816243 ~ 31818992 (+)
AMCG00007834 det1,LOC107654110,LOC107707445,LOC107701843 coding upstream 404342 31794973 ~ 31800664 (+)
AMCG00007829 LOC102800273,LOC107557431 coding upstream 521671 31664646 ~ 31683335 (+)
AMCG00007828 NA coding upstream 542414 31654997 ~ 31662592 (+)
AMCG00007830 hcn4 coding upstream 586128 31580726 ~ 31618878 (+)
AMCG00007839 LOC108438531,LOC107714007,LOC108269325,LOC107654144 coding downstream 105950 32325622 ~ 32356646 (+)
AMCG00007837 ntrk3,LOC106573628,LOC107581857,LOC107573919,LOC108269325 coding downstream 172933 32392605 ~ 32398918 (+)
AMCG00007841 NA coding downstream 309130 32528802 ~ 32850205 (+)
AMCG00007845 klhl25,LOC106560960,LOC107714043 coding downstream 1130422 33350094 ~ 33357685 (+)
AMCG00007846 NA coding downstream 1399631 33619303 ~ 33640336 (+)
G26645 NA non-coding upstream 382033 31822740 ~ 31822973 (+)
G26625 NA non-coding upstream 423115 31781638 ~ 31781891 (+)
G26483 NA non-coding upstream 986684 31218110 ~ 31218322 (+)
G26463 NA non-coding upstream 1097757 31106714 ~ 31107249 (+)
G26462 NA non-coding upstream 1098382 31106414 ~ 31106624 (+)
G26698 NA non-coding downstream 402588 32622260 ~ 32622530 (+)
G26704 NA non-coding downstream 668118 32887790 ~ 32888040 (+)
G26826 NA non-coding downstream 1769374 33989046 ~ 33990588 (+)
G26825 NA non-coding downstream 1772506 33992178 ~ 33993982 (+)
G26875 NA non-coding downstream 2029524 34249196 ~ 34253554 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 764628 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 2385454 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 2480272 29622311 ~ 29724734 (+)
AMCG00007769 acsbg1 other upstream 3198627 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 3293440 28900058 ~ 28911566 (+)
AMCG00007854 NA other downstream 1543841 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 3391310 35610982 ~ 35620801 (+)
AMCG00007889 NA other downstream 4076546 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 4984198 37203870 ~ 37216558 (+)
G27518 NA other downstream 5925312 38144984 ~ 38146850 (+)

Expression


Co-expression Network