AMCG00007841


Basic Information

Item Value
gene id AMCG00007841
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 32528802 ~ 32850205 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007841
ATGCGGAGTCTCCATCAAGCAACATCAGGCTACAACAGCTCCAACCCTTTCTCCACTCAGGTCCCATCTTCAGTTCTCCACACCGATGACAAGACCATTGTGATAAAGGGGCAGCTAGAGAAGCAAGACAGCCCTAGGATGGCGCTGGAACTGATGGTGGGGGACAATACAAGGGCGGAGTTGGTCAGCCTGCTTAGTGTCTGTGTTGGATCTGGACCAGGAAGTGAACCCTGGGACCCTAATGGCTGGAGACTAGTCACCAACAGTATCTGCAGAAAACCAGGCGTCAACTTGATGTGCGATGATGAGCTGAAGAGAGCAGGACATGGATCTTTTGAACAGAAGATGGCCATTTTTGAAGAAACCACCTTGCACGTTGTGAAGTGGTACGATATTCGCTCAGTGACCCTTCTGAGTCTTTACACTGGAGCCCACGCAGTCACTGAGGTTGACAGGTGGGATCGCAAGCGAAAGATGATAAACAAAgtcccctgccctgctgtggTGAAAGAATACAACAAGAACATGGGTGGGGTTCATCTGCTTGACTCACTGATTGCACTGTACCAGAATAAAATCAGATCAAAGAAGTGGTACCACCAGCTGGTGTTCCACTTCCTGGATATGATCATTGTGACCACCTGGCTGCTGTACCGAAGAGATTGTGAAGGCACTGGCATGAGAAAGGAGGAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007841 True 696 mRNA 0.50 6 32528802 32850205

Neighbor

gene id symbol gene type direction distance location
AMCG00007837 ntrk3,LOC106573628,LOC107581857,LOC107573919,LOC108269325 coding upstream 129884 32392605 ~ 32398918 (+)
AMCG00007839 LOC108438531,LOC107714007,LOC108269325,LOC107654144 coding upstream 172156 32325622 ~ 32356646 (+)
AMCG00007840 NA coding upstream 309130 32205006 ~ 32219672 (+)
AMCG00007838 NA coding upstream 709810 31816243 ~ 31818992 (+)
AMCG00007834 det1,LOC107654110,LOC107707445,LOC107701843 coding upstream 728138 31794973 ~ 31800664 (+)
AMCG00007845 klhl25,LOC106560960,LOC107714043 coding downstream 499889 33350094 ~ 33357685 (+)
AMCG00007846 NA coding downstream 769098 33619303 ~ 33640336 (+)
AMCG00007847 LOC108243329,LOC107714027,LOC107654092,LOC100696938 coding downstream 796314 33646519 ~ 33647508 (+)
AMCG00007853 si:dkey-12e7.1,LOC105904526,LOC108427511,LOC103035474,LOC106573761,LOC107583743,LOC107738678 coding downstream 908498 33758703 ~ 33759842 (+)
AMCG00007857 igf1ra,igf1r,LOC101079603,LOC105904485,LOC106949861 coding downstream 1016758 33866963 ~ 33870738 (+)
G26645 NA non-coding upstream 705829 31822740 ~ 31822973 (+)
G26625 NA non-coding upstream 746911 31781638 ~ 31781891 (+)
G26483 NA non-coding upstream 1310480 31218110 ~ 31218322 (+)
G26463 NA non-coding upstream 1421553 31106714 ~ 31107249 (+)
G26462 NA non-coding upstream 1422178 31106414 ~ 31106624 (+)
G26704 NA non-coding downstream 37585 32887790 ~ 32888040 (+)
G26826 NA non-coding downstream 1138841 33989046 ~ 33990588 (+)
G26825 NA non-coding downstream 1141973 33992178 ~ 33993982 (+)
G26875 NA non-coding downstream 1398991 34249196 ~ 34253554 (+)
G26895 NA non-coding downstream 1415916 34266121 ~ 34266418 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 1088424 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 2709250 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 2804068 29622311 ~ 29724734 (+)
AMCG00007769 acsbg1 other upstream 3522423 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 3617236 28900058 ~ 28911566 (+)
AMCG00007854 NA other downstream 913308 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 2760777 35610982 ~ 35620801 (+)
AMCG00007889 NA other downstream 3446013 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 4353665 37203870 ~ 37216558 (+)
G27518 NA other downstream 5294779 38144984 ~ 38146850 (+)

Expression


Co-expression Network