AMCG00007855


Basic Information

Item Value
gene id AMCG00007855
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 33790191 ~ 33797760 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007855
GGAGAAATGGGGAAGTGATTGCAGTTTTGGGCGAAAACCTCTATAAATGCCAAAATATCGTGTTTTCCTAATCCGGGAGAACTTGTGACTGTTGTGCAATGAGTCGCATTTACCACAACACAGCGGTGCAGAATAAGCCAGTGAACAATGAAAAGATATGTGTCGTTTGGCAGCCGTCTGTGTACCAGAGCGGCGCAGGAGTGCTGGTGCAGGGGACGCTGATGGACGTGTCGCGTCACGCAATCACAGACACTAACAATCAAAAGGATCGCTACTATGTTCTGTACATTAAGCCCAGCCAAGCCCATAGGAGGAAGTTCGATGCGAAGGGAAATGAGATTGAGCCCAACTTCAGTGACACACGCAAACTGAGGGCTGCAGTGAACAGGGCAGACCTGGTGAAGGTGACGGGGAGGCACACCCCCAGTGAGACCCTGGCCTTCTGGATTccagagggagagatggagaagacagagctggaggagggcCAGGAAATCAGGCTGAAAACTAAGGGAGACGGGCCTTTCATCTTTTCTTTAGCCAAGCTTGATGGTGGCTCAGTGACCAAGTGTAACTTTGCTGGTGATGAAAAGGCAGGGGCCTCCTGGACTGATAAGATCATGGCCAACAAGTCTGACACAGGGAGCACCGCAAAACTAGCTGCACAAGGAGATGGAGCAGATGACGACGAGtggGATGACTGAGGCAGAGAGCAGAAATGTCAAAGTGCTGAAATCAAGCGGGAAGGTGCTGCTTTGTTGGCATGTGAACGCTGTGTCCCCTTTTCACTCCAGTTTAATAGTGTCGACACCAAATACCTGCCTCTACCAAGTGTACTGAGGAATACAGAGGTTGGCACTGGATAGCTGAggatttttcaaaacattttccaacttttttgtttaatttgattaattattactttttttttccagaataaaATGCTAtccatttttaaagcaatgtataCAATTCTGATCATTAAACGATTTATACATATGatgtagaattattattattatttttatttcttggcagacgcccttatccagggcaacttacaaaataagtgcaaataTTCTCTATTTATAACCTCCCAATCAAAGTATGTGCTTACCTGCACATCATTTTGAGGAGTAATGTTACAAGGGAATCTAGTATATTTACCACCAGATAAAAGGCAAGGGATAGGAGGGATGAGATGGGACTGTCAGACAGTACAGACCTCCCACTACTGAACAAATACTGGATTGTCTTGTAGTTTAAAGTCAGGTGTCTACTACTTATTCAGGGGAATCCACCCTTTTTTGTCTCATAATTAGTTAGTGTAACTGGTTTCAGTTGTATTCAAGTGACTTTTTCCTGTAatggattttttaaaacataactttCCCAGCATTTTTTGCACAAATCTAGGGTCATATTCAAGTACAAAATGAGTCCCGATTCCCCCCCCCTTTTCATCCCTTCAAAGTATGGTCTCAAAGCCATTGCccctgttttttaaaatcaaaattaatattgcattattttcctCCTCACTCCTTCTTCCAGTAAACATGTACAGACTGACTACATCTCACAGAGATACTTAAAAATCATTCTTCACAGCATATTGGAATATATTCTATTGACCTGTTTGAGTTTTCATTATATAaaagtacaatataaaataaaataaaataataaaagtatataaggCACCCAAATTCTATAGCAGTGGTTCCTAATCGTGGTCCTGGGGAGCCACTATCCTGATGCTTTTTGATTCAATTACACACTAagttaattaactgaaaccttaatttataattatttaaattataaaacgTTGGAGAATTTGGTTGCCTCATATACAATGAAATTTAGCCTGATGTCTCTAATGGtttaacattgtaaataaactcTGATTCGGCCAATTGATGGTTAAATGAGAGTGAGAGAACAAAAAGAAGCAGGACATTGGGTTCCCAAGACCCACTGCTGCAGATACTAAAGCAGGGTGCTAAGTTAGTCTAACTCTTTCTAAGTTaagaattaagaattaattaaGTTAAGAATTTTAGTACCGTATTAAGTGGAACAATGGAATACATCTGAATGTCAGAAGATGtactgccattttaatattgctgaaatacacacacacacacacacacatactgtatatagatatagatatatatgctGTTTTACACTAACAGTACCAAACgagaacattacaaaaatatataatgtaatatttataaaagttatataatggattatattacaatatagaaatataaatagaaGTATTGCAGCGTGCACGGAAACAgtcaaattatataataattacgTATAAATATCAACATAAATATAACAtcgtgaaaataaatattagcttTACATTGTAAACTAAAATACAGGTCGAATCGGTTTAAAACGAAAATTTCACAATATGGAAAATATGTCCAAGTCCCAGCCGATTGTTAGTAGCCGAATACTAATGCGAGAGTAATGCGAGAGTAATGCGAGAGTAATGCTACTATTTCGATACAATGACATGTCATTACAACGAAATATTCTGATATTTTCCCCGTAGGAATTTTAGCTGTATTACTATTAGTTTACTAATTacgaatacatttgtttgaagaactacaatatttatgttgtaagaaaacacacacacacacacacacacacacacgtatatatatatatattttttttttcgataaaaaatatataaaacagtaaatCTGTGTAAACAAtccatgtttaatacatattctatatgttaatatataagTCAATTTAAGCAATCCCTGGATGTTTCAATTTAATGCTATTTCCTTAAGAGTCATGTACACACGTTATATATTGGCAAATTAATGGTGTATACAAAATCTCTTTATTTGTTGTATGGTAATTTGTTGTTTCTATAAAGAAAAGGCTTTGTTATTTGAAAAAacctgcataaataaatacaagggataGGGACCAACAGCGTTACGTCTCGTAATTACGCGACGACAGGCAGCTCAATGTCTCCTGTGAGAAATAAAGTCATAAGATATGGATGGGGACCCTGTCCTTAAGtcgtttttgtgtttgtgtgtgtgtgtttagtatttcttcatttttaatataaaccatATTTGTAAAGGAATATCTTACACAGATACGCATTTGTTAATAATTTcaaacaactaaaaaataaaaaagttgtttGGAGAGGATTGGGTGGAGGATGAAGATGGAGTTGTAGAATGGGTGGCGCAGGTTCGATATGcgagttataataataataataataataataataataataataataataacagtag

Function

GO:

id name namespace
GO:0042995 cell projection cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007855 True 3332 mRNA 0.36 6 33790191 33797760

Neighbor

gene id symbol gene type direction distance location
AMCG00007852 ap3s2,LOC101163313,LOC107581850,LOC107372361,LOC107654134 coding downstream 33171 33755856 ~ 33757020 (-)
AMCG00007850 ap3s2,LOC102235539 coding downstream 51824 33720494 ~ 33738367 (-)
AMCG00007851 NA coding downstream 99371 33656281 ~ 33690820 (-)
AMCG00007848 NA coding downstream 282810 33502320 ~ 33507381 (-)
AMCG00007849 NA coding downstream 335755 33426999 ~ 33454436 (-)
AMCG00007856 NA coding upstream 2810 33800570 ~ 33813933 (-)
AMCG00007859 NA coding upstream 124715 33922475 ~ 33938080 (-)
AMCG00007862 NA coding upstream 197952 33995712 ~ 33999738 (-)
AMCG00007861 NA coding upstream 213350 34011110 ~ 34042896 (-)
AMCG00007869 nr2f2,LOC107690378,LOC107549018 coding upstream 999135 34796895 ~ 34804878 (-)
G26800 NA non-coding downstream 64295 33725582 ~ 33725896 (-)
G26764 NA non-coding downstream 149855 33592222 ~ 33640336 (-)
G26684 NA non-coding downstream 1372691 32413280 ~ 32417500 (-)
G26646 NA non-coding downstream 1967222 31822742 ~ 31822969 (-)
G26626 NA non-coding downstream 2008300 31781638 ~ 31781891 (-)
G26847 NA non-coding upstream 188787 33986547 ~ 33987991 (-)
G26848 NA non-coding upstream 194375 33992135 ~ 33993958 (-)
G26883 mef2a non-coding upstream 391736 34189496 ~ 34223231 (-)
G26893 NA non-coding upstream 451439 34249199 ~ 34253565 (-)
G26943 NA non-coding upstream 998409 34796169 ~ 34796853 (-)
AMCG00007835 LOC107594750 other downstream 1974040 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 2447399 31338716 ~ 31342792 (-)
AMCG00007817 NA other downstream 2543542 31192010 ~ 31246649 (-)
AMCG00007768 NA other downstream 4776244 29001049 ~ 29013947 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other downstream 4869068 28894693 ~ 28921123 (-)
G26961 LOC101154678 other upstream 1071675 34869435 ~ 34869807 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 2205433 36003193 ~ 36010995 (-)
AMCG00007907 NA other upstream 3044715 36842475 ~ 36846583 (-)
AMCG00007929 NA other upstream 3442324 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 3697151 37494911 ~ 37499392 (-)

Expression


Co-expression Network