AMCG00007856


Basic Information

Item Value
gene id AMCG00007856
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 33800570 ~ 33813933 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007856
ATGGCAGGGAAGCAGAAACAGAGCCCCGTTTTCAGGAGCAGTGAGCGACGAGGAGGGGGCTTTGTGAGAATCAGCACTCTGCTGGAGGAAGGCCTGTTCCCAGTAGGTGGATCAATCACCAAAGTGAAGCTGCTGAAGGCCAGAGTTGACAGCGGAGTGACTGTAGACCTGGAGACGGAGGGGGTCCCGGTTGTGGCATCACTCCTGAAGCTCTACCTGAAAGATCTCCCAACAGCTCTCATCCTGGATTACACAGGGCAATGGGGAGACTATCCTGTGGATATTCTGTGTGATGTGAGCTATGAAACCTTGAAGAAATCCTCAGATGATTGCTTGTCTCATCTGCAGTCAACCAGCGCATGTGTGACGAGCTGGTTTGTGCCTCCTGACAGTGCAAAGGTGAAGATTAAAATCTCGAATGTGGCTCGTTTTTCTCTGTTTGGTGATGACGACCCAGCCCACACAGTACTGGCGCTTGTACAGCCAGGGGAGGAGACCCAATtgCTCGCCCTGTATCTGGATGGAAGATGGTGGTCTGTGGCCGATGTGATGAAGACCTCAAACCCCTCAAGAGTGGGGCTGGTCACGGTGCAGTCTGTTGGAGAGAGGGTGGTGCTGTTCCTCCTCAGTCAGTTTATTTTTGGGATCCTGGAGAGGCCTCTAGAATCAGAGCTGGCCTTCTCCCTACACCCTGCCGGGGAGCTCGGAAAAATCACATGGAGCAACGGAGAGGCAGTTGGATTTTACACAGTGAAGCGGAAAGGCAGCCTGTGTGACAGCTTCACCAGTCAGTCCTACAAACTCCCTGTACTGGACACTCTGTTTGTGAGGAGACATTGGAGGCGGAGGGGGTTTGCTCTGGAGATGTTAGAAGACTTCTGTAGTTCCTTCGGGAAAGAGGAGGCCCTAGGGATCAGCAATCCAATATCTCCCAGCATGTATGAAGTGTGCAGGAAATACCTTCTGACCCACCAAAAACAGAGGGATCGTCTGTATGAGGTGGAGGCCCCTGGTGGCTGGGGTGAGAGACGCAGCGTGTGGTTACAAATACAGCTCAGCCACATCCCGAAAAACAGTAAAGAACAGGCTTTGAGTTTAGAAGTGTCCAAAGGAGAAGTAAATGCCACAGAAGATCTGAAGGAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007856 True 1146 mRNA 0.52 9 33800570 33813933

Neighbor

gene id symbol gene type direction distance location
AMCG00007855 NA coding downstream 2810 33790191 ~ 33797760 (-)
AMCG00007852 ap3s2,LOC101163313,LOC107581850,LOC107372361,LOC107654134 coding downstream 43550 33755856 ~ 33757020 (-)
AMCG00007850 ap3s2,LOC102235539 coding downstream 62203 33720494 ~ 33738367 (-)
AMCG00007851 NA coding downstream 109750 33656281 ~ 33690820 (-)
AMCG00007848 NA coding downstream 293189 33502320 ~ 33507381 (-)
AMCG00007859 NA coding upstream 108542 33922475 ~ 33938080 (-)
AMCG00007862 NA coding upstream 181779 33995712 ~ 33999738 (-)
AMCG00007861 NA coding upstream 197177 34011110 ~ 34042896 (-)
AMCG00007869 nr2f2,LOC107690378,LOC107549018 coding upstream 982962 34796895 ~ 34804878 (-)
AMCG00007874 chd2,LOC107715217,LOC107690375 coding upstream 1742317 35556250 ~ 35594137 (-)
G26800 NA non-coding downstream 74674 33725582 ~ 33725896 (-)
G26764 NA non-coding downstream 160234 33592222 ~ 33640336 (-)
G26684 NA non-coding downstream 1383070 32413280 ~ 32417500 (-)
G26646 NA non-coding downstream 1977601 31822742 ~ 31822969 (-)
G26626 NA non-coding downstream 2018679 31781638 ~ 31781891 (-)
G26847 NA non-coding upstream 172614 33986547 ~ 33987991 (-)
G26848 NA non-coding upstream 178202 33992135 ~ 33993958 (-)
G26883 mef2a non-coding upstream 375563 34189496 ~ 34223231 (-)
G26893 NA non-coding upstream 435266 34249199 ~ 34253565 (-)
G26943 NA non-coding upstream 982236 34796169 ~ 34796853 (-)
AMCG00007835 LOC107594750 other downstream 1984419 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 2457778 31338716 ~ 31342792 (-)
AMCG00007817 NA other downstream 2553921 31192010 ~ 31246649 (-)
AMCG00007768 NA other downstream 4786623 29001049 ~ 29013947 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other downstream 4879447 28894693 ~ 28921123 (-)
G26961 LOC101154678 other upstream 1055502 34869435 ~ 34869807 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 2189260 36003193 ~ 36010995 (-)
AMCG00007907 NA other upstream 3028542 36842475 ~ 36846583 (-)
AMCG00007929 NA other upstream 3426151 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 3680978 37494911 ~ 37499392 (-)

Expression


Co-expression Network