AMCG00007859


Basic Information

Item Value
gene id AMCG00007859
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 33922475 ~ 33938080 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007859
ATGGCAATGCATTCCTGCTCCAGACTGCAGCTCGCACCTATGCGCGGAGAAGATGTCGCCTGCATCCTTGTGCAGCCAGACACCAGCGTCCCCCGAATACAGCCAGACACCAGCGTCCCCCGAATACAGCCAGACACCAGCGTCCCCCGAATACAGCCAGACACCAGCGTCCCCCGAATACAGCCAGACACCAGCGTCCCCGGAAAACAGCCAGACACCAGCGTCCCCGGAAAACAGCCAGACACCAGCGTCCCCCGAATACAGCCAGACACCAGCGTCCCCCGAATACAGCCAGACACCAGCGTCCCCCGAATACAGCCAGACACCAGTGTCCCCCGAATACAGCCAGACACCAGCGTCCCCCGAATACAGCCAGACACCAGCGTCCCCCGAAAACAAGACAGCATGCACAGCTGCAAGCTGTGTGGCGGGACACCCCGCCCCCACCAACCCTTCTCTTTCCTTCCCACAAACACTCTCTCAGCTGTGACACAGCCCACAGGCTCTGGAGGCCCCCACTCTGAAAAATATCCCCTTTGTTTCCCGGTCGCCCTGGACCTCACACAGTCCACAGAGGATCCGCTGTGCAGTACAGCCTCTGGCCAGCAGGGGGCTCGGGCTCTTGCCATGCAGAATTTCTTGTGTCAGCTAGACATCCGAAGCTTCAAGAACAGGAATACTGAAGGAGAAGATATTGGCAGTAAGGTTCTGCACCGTGAAACAAAGTCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007859 True 732 mRNA 0.58 4 33922475 33938080

Neighbor

gene id symbol gene type direction distance location
AMCG00007856 NA coding downstream 108542 33800570 ~ 33813933 (-)
AMCG00007855 NA coding downstream 124715 33790191 ~ 33797760 (-)
AMCG00007852 ap3s2,LOC101163313,LOC107581850,LOC107372361,LOC107654134 coding downstream 165455 33755856 ~ 33757020 (-)
AMCG00007850 ap3s2,LOC102235539 coding downstream 184108 33720494 ~ 33738367 (-)
AMCG00007851 NA coding downstream 231655 33656281 ~ 33690820 (-)
AMCG00007862 NA coding upstream 57632 33995712 ~ 33999738 (-)
AMCG00007861 NA coding upstream 73030 34011110 ~ 34042896 (-)
AMCG00007869 nr2f2,LOC107690378,LOC107549018 coding upstream 858815 34796895 ~ 34804878 (-)
AMCG00007874 chd2,LOC107715217,LOC107690375 coding upstream 1618170 35556250 ~ 35594137 (-)
AMCG00007875 NA coding upstream 1687730 35625810 ~ 35637920 (-)
G26800 NA non-coding downstream 196579 33725582 ~ 33725896 (-)
G26764 NA non-coding downstream 282139 33592222 ~ 33640336 (-)
G26684 NA non-coding downstream 1504975 32413280 ~ 32417500 (-)
G26646 NA non-coding downstream 2099506 31822742 ~ 31822969 (-)
G26626 NA non-coding downstream 2140584 31781638 ~ 31781891 (-)
G26847 NA non-coding upstream 48467 33986547 ~ 33987991 (-)
G26848 NA non-coding upstream 54055 33992135 ~ 33993958 (-)
G26883 mef2a non-coding upstream 251416 34189496 ~ 34223231 (-)
G26893 NA non-coding upstream 311119 34249199 ~ 34253565 (-)
G26943 NA non-coding upstream 858089 34796169 ~ 34796853 (-)
AMCG00007835 LOC107594750 other downstream 2106324 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 2579683 31338716 ~ 31342792 (-)
AMCG00007817 NA other downstream 2675826 31192010 ~ 31246649 (-)
AMCG00007768 NA other downstream 4908528 29001049 ~ 29013947 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other downstream 5001352 28894693 ~ 28921123 (-)
G26961 LOC101154678 other upstream 931355 34869435 ~ 34869807 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 2065113 36003193 ~ 36010995 (-)
AMCG00007907 NA other upstream 2904395 36842475 ~ 36846583 (-)
AMCG00007929 NA other upstream 3302004 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 3556831 37494911 ~ 37499392 (-)

Expression


Co-expression Network