AMCG00007862


Basic Information

Item Value
gene id AMCG00007862
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 33995712 ~ 33999738 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007862
ATGGCATCCGGGGAGCGAGTCGTGCTGCTTTTAACCGggTTTGCTCCATTCAGACAGTACCTGGTGAATCCCAGCTGGCAGGCAGTGCAGGGTTTGGAGGAGGCCGGGCTGGGAGAGGATGTGGAACTGCATATTAAGGAGCTGCCAGTGAGCTACAGCAAAGCTCAAGAGCTAGTTGTCAGTCTGTGGAAAACCTTCCGGCCCCAGCTGGCAGTCCATGTGGGCATTGCCCCGGGATGCAGGGCCATTATGGTGGAGCAGAGTGGCAAGAACCAGGCCTACAAAGAGCGAGATGTACGTGGGGTCTGTCCTGCCAACTACTGCTGCATTGAAGGGGGGCCGGAGAGAATTGACTCGGTCATCGATATGAAGTCCCTGACTAGACACCTGAGGAAGCTGGGGCTGGACATCATTTACTCTAGGGACGCTGGGAGGTACCTTTGTGATTTTGTCTACTACACCTCTCTGTACCACAGCAGTGGGAGAGCAGCCCTCATTCACATCCCCACCTCAGGCAGCCTGACTGCCACAGGGAGGCTACTGCCCAGCCTGAAGACCATCATTCAGACCATGCTGCAGCAGATAGAGGAGACAATGTGCTTTTCTTCACAACACATACAGGACAGACTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007862 True 633 mRNA 0.55 5 33995712 33999738

Neighbor

gene id symbol gene type direction distance location
AMCG00007859 NA coding downstream 57632 33922475 ~ 33938080 (-)
AMCG00007856 NA coding downstream 181779 33800570 ~ 33813933 (-)
AMCG00007855 NA coding downstream 197952 33790191 ~ 33797760 (-)
AMCG00007852 ap3s2,LOC101163313,LOC107581850,LOC107372361,LOC107654134 coding downstream 238692 33755856 ~ 33757020 (-)
AMCG00007850 ap3s2,LOC102235539 coding downstream 257345 33720494 ~ 33738367 (-)
AMCG00007861 NA coding upstream 11372 34011110 ~ 34042896 (-)
AMCG00007869 nr2f2,LOC107690378,LOC107549018 coding upstream 797157 34796895 ~ 34804878 (-)
AMCG00007874 chd2,LOC107715217,LOC107690375 coding upstream 1556512 35556250 ~ 35594137 (-)
AMCG00007875 NA coding upstream 1626072 35625810 ~ 35637920 (-)
AMCG00007876 LOC107601651,LOC107690372,LOC103369184 coding upstream 1650106 35649844 ~ 35665471 (-)
G26848 NA non-coding downstream 1754 33992135 ~ 33993958 (-)
G26847 NA non-coding downstream 7721 33986547 ~ 33987991 (-)
G26800 NA non-coding downstream 269816 33725582 ~ 33725896 (-)
G26764 NA non-coding downstream 355376 33592222 ~ 33640336 (-)
G26684 NA non-coding downstream 1578212 32413280 ~ 32417500 (-)
G26883 mef2a non-coding upstream 189758 34189496 ~ 34223231 (-)
G26893 NA non-coding upstream 249461 34249199 ~ 34253565 (-)
G26943 NA non-coding upstream 796431 34796169 ~ 34796853 (-)
G26952 NA non-coding upstream 816956 34816694 ~ 34816920 (-)
G26994 NA non-coding upstream 1531192 35530930 ~ 35531438 (-)
AMCG00007835 LOC107594750 other downstream 2179561 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 2652920 31338716 ~ 31342792 (-)
AMCG00007817 NA other downstream 2749063 31192010 ~ 31246649 (-)
AMCG00007768 NA other downstream 4981765 29001049 ~ 29013947 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other downstream 5074589 28894693 ~ 28921123 (-)
G26961 LOC101154678 other upstream 869697 34869435 ~ 34869807 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 2003455 36003193 ~ 36010995 (-)
AMCG00007907 NA other upstream 2842737 36842475 ~ 36846583 (-)
AMCG00007929 NA other upstream 3240346 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 3495173 37494911 ~ 37499392 (-)

Expression


Co-expression Network