AMCG00007864


Basic Information

Item Value
gene id AMCG00007864
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 34065131 ~ 34083321 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007864
aaaataaaaaaaaacagtgaagtGTATCTGTCTCTTACAGAGATTGGAGACCTGAGGGACCTGGAGACTCTGGACGTGTCTATGAACCGGCTGAGCGCCCTGCCTGAGAGACTGCAGCACTGCCTGTCCCTGCAGTGCCTGACTGCTGACCGCAACACCCTGAGCTGCTTCCCCCGCCAACTCTGCCAGCTGCACAGCCTCAACGAGCTCTCCATGGCTGGCAACTGCCTGGCTGCCTTGCCCCTGGATCTAGGGCGGTCTCGGGAGCTGCAGTTTGTCTTTGTTGACAATAACATTCACCTGAAGGGCCTCCCATCCTACCTGTACAACAAGGTGATTGGCTGCAGCGGGTGTGGCCTGGCTGTGCACGTGTCTGATGTGAGGCTGCTCTCCGTGGACTCGGGAGAGATGACCATCCCACTGCCCGCGGAGGTGAAGGCCATTGGCTTAGAGGCAGATCGTGTGCTGCCCCTGCAGGAGCTGGCAATGAGAGTCCTGCACAACATGTACAGAGCCCCCATGAAGGACACCGACTTCTTGCCCCCGATCTCATTGCCCAAGAgcctgctggagctgctgcagtgtCCCCTGGGTCACTGCCACCGCTGCAGCCAGCCTATGTTTACCATCGTCTACCCCAAATTGTTCCCTCTGAGGGAGACGGCGCTGGCAGGAGTGCACCGCAGGACAACAGTGAGCTTCGTTGCATACTGCTGCTCCAGCCAGTGCCTCAGCATGTTTGACCTGCAGAGCTGATTTCAAGGGCCTTTCTTTCtcactggaagacggcaaaaaGAATCCTACTGTAATGGACTCCAATCCCTCCCTTGTAGCTTTTCAGAGCAGAGCAGGTACAAGCAGGTCTGGTCAGGGTTTTAAAAGCAACCTCTCTggtgttctttttttgtttgcactttttacagtttatcctgaacataaaacaatataccaGCCTCCCTCCTTTAAGAGCAATATCATTCTCATGTATGTGAgatctctttatttttaaaggtggtgggggggtataGACTCAATGCAGAATGCTTGTAAAGCCTAGATGTGGAAAGTGGATTTCTACAGCCTCCAACTCCACATGAACCACCGATTTGACTCTAATCAAACACTCAAGCTCTCATGATTCACAGACACTGGCATCTGGATCATCCTCAGTTGTGCTTGTCGTCTTGTTGGCACTGTGATTTTCATCCTTCCCGTTCTAAAGAAAATAAGCTAAAGTATTTTTCTACctgacatttttttctctccatccaaaaaaaatgcagtaaagatttgtaaataatgagcatttttataatgaaaaatgtttttctcacCCCCCAGTCCCCTACATCTTAACTATGCTTTTCTGTGTTACTCTATAGTACATTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007864 True 1390 mRNA 0.49 5 34065131 34083321

Neighbor

gene id symbol gene type direction distance location
AMCG00007863 lrrc28,LOC107706938,LOC107563201,LOC107662304,LOC107690794 coding upstream 12941 34044612 ~ 34052190 (+)
AMCG00007860 NA coding upstream 54580 34001037 ~ 34010551 (+)
AMCG00007858 LOC107583745 coding upstream 80351 33940402 ~ 33984780 (+)
AMCG00007857 igf1ra,igf1r,LOC101079603,LOC105904485,LOC106949861 coding upstream 194393 33866963 ~ 33870738 (+)
AMCG00007853 si:dkey-12e7.1,LOC105904526,LOC108427511,LOC103035474,LOC106573761,LOC107583743,LOC107738678 coding upstream 305289 33758703 ~ 33759842 (+)
AMCG00007865 LOC107715609 coding downstream 139578 34222899 ~ 34225641 (+)
AMCG00007866 mef2a coding downstream 157515 34240836 ~ 34249075 (+)
AMCG00007868 NA coding downstream 188442 34271763 ~ 34325416 (+)
AMCG00007867 NA coding downstream 265166 34348487 ~ 34353634 (+)
AMCG00007870 NA coding downstream 1139143 35222464 ~ 35228724 (+)
G26825 NA non-coding upstream 71149 33992178 ~ 33993982 (+)
G26826 NA non-coding upstream 74543 33989046 ~ 33990588 (+)
G26704 NA non-coding upstream 1177091 32887790 ~ 32888040 (+)
G26698 NA non-coding upstream 1442601 32622260 ~ 32622530 (+)
G26645 NA non-coding upstream 2242158 31822740 ~ 31822973 (+)
G26875 NA non-coding downstream 165875 34249196 ~ 34253554 (+)
G26895 NA non-coding downstream 182800 34266121 ~ 34266418 (+)
G26923 NA non-coding downstream 542641 34625962 ~ 34626229 (+)
G26933 NA non-coding downstream 707435 34790756 ~ 34793855 (+)
G26934 NA non-coding downstream 710609 34793930 ~ 34794542 (+)
AMCG00007854 NA other upstream 270190 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 2624753 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 4245579 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 4340397 29622311 ~ 29724734 (+)
AMCG00007769 acsbg1 other upstream 5058752 29003095 ~ 29006379 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 1527661 35610982 ~ 35620801 (+)
AMCG00007889 NA other downstream 2212897 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 3120549 37203870 ~ 37216558 (+)
G27518 NA other downstream 4061663 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 4085249 38168570 ~ 38170146 (+)

Expression


Co-expression Network