AMCG00007868


Basic Information

Item Value
gene id AMCG00007868
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 34271763 ~ 34325416 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007868
ATGCAGGGAGCCCGGGCTTGCAAACAGCCAGTACACAGTATGCATGTGTTGGCTACTTTGAGCGCCAGTGCGCCCGGGTGCTGTGGCTGGAGCCCTGCGTGCGGCACCGGGGACGGGCTGGCCGAGCTGGCCGAGCTGCGCTGCTCTCATCCGCGAAGAGGTCAAactctgaaaagaaaaagaaagaaagaagaaaacgaGCACTATTTTGCTCCTTTTATAATGGAGTCCAGCAAGCCTACGGTGTGGAGCAATATCCGCCAGAAGGCAAAGCCCCTGTTTTCCAACCTGAACAGTAGGAAGGGAAAGAAGATCGGCAGTAAGTTAGACATCCGAAAGAAGCATATTTTGGACCAGAGGATGAGTGTCTCTGTGCCAGACATTCGACACATGCCGAGTTCGTCCTCCATGCCCGACGGGCAGGCTGCGTTACAGTTGCCCGACTCTGATGCCTGTTGCTATAGCCGGCCTTCTTCCCCACTAAACAGGCCCCTGACTGACAGCAACAGTGCCACAGCTGCTTTGACTAACAGGCTGGCCGTGCCAACAAATGCAGTCTGGGACTACATGGATTCTGAAGGGACCGAGTTCCCCATATCAAAAGAGGACAACTTTCACGACAGCATTGTTGTATCGGAGTATATGGATCAGGAGGAAACCAAATATATAGAAGGAGCTTCAATGCACATCAAAGATGTTTATCTGGAACAAACTGAAGGGAATATTGAGGAAAATTGTGACCACAATGACCCTAACCTTGACAGCCAGTCATCACAGTTCTTTGAAGAAAATTACATGTTTGACGAGAGTCAGGAGGGTGCctcagcacagacacagaagaCGTACCTTCTGACAATCACgctgaaggaaggaaggaacTTGGTAATCAGGGACCGTTCCGGTACCAGCGACCCCTATGTCAAGTTTAAACTCAACGGAAAAACTTTTTATAAGAGTAAAGTAGTGTACAAGAACCTCAACCCTGTGTGGAATGAATCCTTTGCTCTTCCTGTACGGGATTTGGAACAGAAATTGTACATCAAGGTCTATGACCGGGATCTGACCATGGATGACTTCATGGGCTCCACCAATGTGCTCATGAGTGACCTAGACCTGGAAAGAACTGTTGAAAAGGTTCTCGCCCTGAATGATCCGAACAGCTTGGAGAATGACATGGGAGTGATTGTGCTAGACATGTGTCTGTCAATCAGAGATGGCGAAAGTAAGAAGAATTCGTCTAACATCTTGCAAAACCGGCACCTGTCAGAATCACTACGCAAGAGCCAGCTGTGGAGTGCAGTGGTGGGCATCACTCTGGTGGAGGGACAGGACCTGCCAGACGATGGCCAAGGGGAAGTCTTTGTCCGCTTCAGACTGGGCGATCAGAAATACAAGAGCAAGAATCTGGTTAAAAAGGCAAACCCCCAGTGGAGGGAGAAGTTTGATTTTAACCAGTTCCAAGATGGACCTGATGTGCTTGAGATTGAGGTTTGGGCAAAAGAAGGCAGGAGATACGAGGAGTGCTTTGGGATGTGTGACGTGGACCTGTCCAAGGTGCCAGAGAATGCGACTAAGCCCTTCACTAAGGCCCTGAACTCAGGCAGGGGGAAGGTGGTTTTCCTGATCACTCTGAGCCCCTGCACGGGGGTCTCCATCGGTGACATATGTGCCTCCCCCCTGCAGGAGGCCACTGAGAGAGAGCAGATAATGCAGAAATATTGTTTGAAGAACTCCCTTCAGAATATAAAAGATATCGGTTTCCTTCAAGTAAAGGTGATAAAAGCTGCGGACCTCTTAGCTGCTGATATAATAGGAAAGAGCGATCCCTTTGTCGTATTAGAGCTGGGAAATGACCGCCTGCAGACTCGGACCATCTATAAAAACCTGCACCCAGAGTGGAACACAGTGTTTACTTTGTATGTCGCTAAACTGGCATCAtctaaaaGtatttttgctgctgttgttccATCAACAGATTACTACTCCTTTTGTTCTTCTTCATTTCGCTCTTATTTAGAGGTCCCTGTAATCGAAACACCAATGGTACACAATGGTCATCAGACATCCTATTCATTGAAGAACAAGGACTTAAGTGGGCCTGCCAAGGGGACTATTTGTTTGGACCTGGAGGTCATTTTTAACCCGGTTAAAGCAAGCATCAGAACCTTCAAACCAAAAGAATTGAAATTTATGGAGGACAATCCCAAATTCTCCaaaaagATTTTAGCACGGAACGTGTATCGAGTTAGGAAAATCACCAAGGCGGTATTGCACACGATGCAATATATTAAAAGCTGTTTTCAATGGGAAAGCTCGCAAAGGAGTCTAGTAGCTTTCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007868 True 2340 mRNA 0.48 17 34271763 34325416

Neighbor

gene id symbol gene type direction distance location
AMCG00007866 mef2a coding upstream 22688 34240836 ~ 34249075 (+)
AMCG00007865 LOC107715609 coding upstream 46122 34222899 ~ 34225641 (+)
AMCG00007864 NA coding upstream 188442 34065131 ~ 34083321 (+)
AMCG00007863 lrrc28,LOC107706938,LOC107563201,LOC107662304,LOC107690794 coding upstream 219573 34044612 ~ 34052190 (+)
AMCG00007860 NA coding upstream 261212 34001037 ~ 34010551 (+)
AMCG00007867 NA coding downstream 23071 34348487 ~ 34353634 (+)
AMCG00007870 NA coding downstream 897048 35222464 ~ 35228724 (+)
AMCG00007871 NA coding downstream 995203 35320619 ~ 35323890 (+)
AMCG00007872 LOC106561144,LOC106573775 coding downstream 1212145 35537561 ~ 35548907 (+)
AMCG00007878 si:dkeyp-59c12.1,LOC106561194,LOC108431221,LOC107690407,LOC107549016,LOC107715600,LOC107693031 coding downstream 1486310 35811726 ~ 35815067 (+)
G26895 NA non-coding upstream 5345 34266121 ~ 34266418 (+)
G26875 NA non-coding upstream 18209 34249196 ~ 34253554 (+)
G26825 NA non-coding upstream 277781 33992178 ~ 33993982 (+)
G26826 NA non-coding upstream 281175 33989046 ~ 33990588 (+)
G26704 NA non-coding upstream 1383723 32887790 ~ 32888040 (+)
G26923 NA non-coding downstream 300546 34625962 ~ 34626229 (+)
G26933 NA non-coding downstream 465340 34790756 ~ 34793855 (+)
G26934 NA non-coding downstream 468514 34793930 ~ 34794542 (+)
G26935 NA non-coding downstream 469184 34794600 ~ 34796095 (+)
G26951 NA non-coding downstream 489744 34815160 ~ 34815389 (+)
AMCG00007854 NA other upstream 476822 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 2831385 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 4452211 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 4547029 29622311 ~ 29724734 (+)
AMCG00007769 acsbg1 other upstream 5265384 29003095 ~ 29006379 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 1285566 35610982 ~ 35620801 (+)
AMCG00007889 NA other downstream 1970802 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 2878454 37203870 ~ 37216558 (+)
G27518 NA other downstream 3819568 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 3843154 38168570 ~ 38170146 (+)

Expression


Co-expression Network