AMCG00007870


Basic Information

Item Value
gene id AMCG00007870
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 35222464 ~ 35228724 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007870
ATGGTGGCCAAAGTGAAGACGCTGGGCATCGTGTTTGATGAGGACAAGGGCGGCTATTGCGGCGGGGAGACGGTGTCCGGACACGTCTTGCTGGACGTCTCTGCCCCGCTTCGGATGCGGGCGATTTCCGTGGTGGCGAGGGGCTGTGCCCGGGTGAGCTGGAGCGAGGGGCCGGGGTCGCCCATCTCGCCCATCCACAGTGCCAGGACACCGGCATGGCAGTGCCCGTCCTCCTCGCACGGTGTCGGGGGTGAGCTCCAGTATCTGCACGCCGCCCAGACGCTGCGGGAAGCGACAGGAAAGCACGAATTCCCTTTCAGCTTCCAGTTGCCGCAGGGgCCCTTGGTTACTTCATTTTCTGGGAAAAATGGGAGCGTTCATTACTGGGTGACGGCAGTGTTGCAGCGGCCTTCTACCCAAGACCAGTGTGTGCACAGAGAATTCCCTGTCATTAGCCATATAGATGTCAACTCCCCAGCTCTCCTGtgtccTATCTCAACAAACAAAGAGATGATGGTTGGCTGTTGGTGTTTCACATCAGGACCTATTTCACTGAGTGCCAAAATTGACAGAAAAGGATACTGTAATGGGGAAGCCATTCCTATCTATGCGGAGATTGAGAACTGCTCTTCACGTCTCATCGTGCCCAAAGCGGCTATTTACCAGACTCAGACCTGCTTGACTAACGGCAAAACTAAAACGTTCAAGCAGGAAGTTGCCAGCGTGCGGGGAAATCACATTGCCTCAGGCACAACTGACACTTGGAATGGAAAAACACTTAAGATCCCCCCAGTATCTGCCTCGATTCTCAACTGCTCCATCCTCCGAGTCGAGTATTGTTTGGCAATAATGGTTCAGATTCCTGGGGCAAAGAAACTGAGAGTGGAGCTGCCTCTAGTTATTGGCACCATCCCGTACAACGGATTTGGGAGCAGAAGCTCAAGTATGAGCAGCCAGTTCAGTATGGACCTGAGTTGGCTAACCCTGGCACTACCTGAGCAACCAGAAGCTCCTCCAAACTACGCAGCTGTGGTATCGGAAGAAGAGTTCGAGCAGCACACGCCCTCTTACTCCCAGTCCGAGGAGCTGGTGCGGGAACTTGGCAGCCCCGTCTTTGCTTATATTCAAGAGTTTAAGTTCCAGCCTCCGCCTTTATATTCTGAAATCGACCCATATCCAGTCCACAGTGAAGACCCACCGCTTAGAGTTGAATTTTCAATCGGACATCTGAACGCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007870 True 1239 mRNA 0.54 8 35222464 35228724

Neighbor

gene id symbol gene type direction distance location
AMCG00007867 NA coding upstream 868830 34348487 ~ 34353634 (+)
AMCG00007868 NA coding upstream 897048 34271763 ~ 34325416 (+)
AMCG00007866 mef2a coding upstream 973389 34240836 ~ 34249075 (+)
AMCG00007865 LOC107715609 coding upstream 996823 34222899 ~ 34225641 (+)
AMCG00007864 NA coding upstream 1139143 34065131 ~ 34083321 (+)
AMCG00007871 NA coding downstream 91895 35320619 ~ 35323890 (+)
AMCG00007872 LOC106561144,LOC106573775 coding downstream 308837 35537561 ~ 35548907 (+)
AMCG00007878 si:dkeyp-59c12.1,LOC106561194,LOC108431221,LOC107690407,LOC107549016,LOC107715600,LOC107693031 coding downstream 583002 35811726 ~ 35815067 (+)
AMCG00007881 NA coding downstream 631907 35860631 ~ 35931488 (+)
AMCG00007884 NA coding downstream 788963 36017687 ~ 36019684 (+)
G26960 LOC101154678 non-coding upstream 352742 34869444 ~ 34869722 (+)
G26951 NA non-coding upstream 407075 34815160 ~ 34815389 (+)
G26935 NA non-coding upstream 426369 34794600 ~ 34796095 (+)
G26934 NA non-coding upstream 427922 34793930 ~ 34794542 (+)
G26933 NA non-coding upstream 428609 34790756 ~ 34793855 (+)
G26978 NA non-coding downstream 61312 35290036 ~ 35290245 (+)
G26993 NA non-coding downstream 322118 35550842 ~ 35552503 (+)
G26998 NA non-coding downstream 327421 35556145 ~ 35559559 (+)
G27021 NA non-coding downstream 366689 35595413 ~ 35603182 (+)
G27025 NA non-coding downstream 379699 35608423 ~ 35608637 (+)
AMCG00007854 NA other upstream 1427523 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 3782086 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 5402912 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 5497730 29622311 ~ 29724734 (+)
AMCG00007769 acsbg1 other upstream 6216085 29003095 ~ 29006379 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 382258 35610982 ~ 35620801 (+)
AMCG00007889 NA other downstream 1067494 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 1975146 37203870 ~ 37216558 (+)
G27518 NA other downstream 2916260 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 2939846 38168570 ~ 38170146 (+)

Expression


Co-expression Network