AMCG00007877 (LOC105016671,LOC103369184,LOC102786692,LOC101476567,LOC102297530,LOC100700148,LOC106588105)


Basic Information

Item Value
gene id AMCG00007877
gene name LOC105016671,LOC103369184,LOC102786692,LOC101476567,LOC102297530,LOC100700148,LOC106588105
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 35718024 ~ 35735817 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007877
ATGCAGGTGAAAAATCAGAGGTGTCCCGACCGCAGCGCCGGGGACATCCAGCGAGAGGACAGCCAGAAGAAGTCTTCGTGCTTCTCCAACATCAAGATCTTTCTGGTGTCGGAATGCGCGCTGATGTTGGCGCAGGGCACCGTCGGGGCATACCTGGTCAGTGTTCTGACCACGCTGGAGCGGAGGTTCAACCTGCAGAGTGCCGACGTGGGCGTGATCGCCAGCAGCTTCGAGATCGGGAACCTGGCGCTCATCCTGTTTGTCAGCTACTTTGGCGCCAAGGGACACCGGCCGCGCCTGATTGGCTGCGGGGGCATTGTGATGGCGCTGGGCGCTCTCCTGTCTGCCCTGCCGGAGTTCCTCACCCACCAGTACGAGTACGAGGCCGGGGAGTTCTGGCGCGGGGAGGACGGCAGAGACGTGTGCTCCAACACCTCCATTAGGGCCTCGGGGAGCTCGGAGTCTGGCTTCATCTGTGGGAACAGGACTAACACCAACATGATGTACCTACTGCTGATTGGAGCCCAGGTTCTACTAGGGATTGGGGCCACACCTGTGCAGCCCCTGGGCGTCTCCTATATAGATGACCATGTGAAGAGGAAAGATTCCTCACTTTATATAGGGCTGCCAGGTGATCAGTGGGCAGATGCTCGGTACATGGcgtaa

Function

NR:

description
PREDICTED: solute carrier organic anion transporter family member 3A1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007877 True 666 mRNA 0.59 3 35718024 35735817

Neighbor

gene id symbol gene type direction distance location
AMCG00007876 LOC107601651,LOC107690372,LOC103369184 coding downstream 52553 35649844 ~ 35665471 (-)
AMCG00007875 NA coding downstream 80104 35625810 ~ 35637920 (-)
AMCG00007874 chd2,LOC107715217,LOC107690375 coding downstream 123887 35556250 ~ 35594137 (-)
AMCG00007869 nr2f2,LOC107690378,LOC107549018 coding downstream 913146 34796895 ~ 34804878 (-)
AMCG00007861 NA coding downstream 1675128 34011110 ~ 34042896 (-)
AMCG00007880 NA coding upstream 104336 35840153 ~ 35852765 (-)
AMCG00007879 NA coding upstream 120071 35855888 ~ 35859285 (-)
AMCG00007882 NA coding upstream 195425 35931242 ~ 35941429 (-)
AMCG00007886 NA coding upstream 302629 36038446 ~ 36060653 (-)
AMCG00007885 NA coding upstream 386453 36122270 ~ 36142643 (-)
G27023 NA non-coding downstream 114849 35595430 ~ 35603175 (-)
G26997 NA non-coding downstream 165517 35550871 ~ 35552507 (-)
G26995 NA non-coding downstream 180388 35537304 ~ 35537636 (-)
G26994 NA non-coding downstream 186586 35530930 ~ 35531438 (-)
G26952 NA non-coding downstream 901104 34816694 ~ 34816920 (-)
G27107 NA non-coding upstream 290906 36026723 ~ 36026983 (-)
G27109 NA non-coding upstream 293652 36029469 ~ 36030312 (-)
G27123 NA non-coding upstream 366489 36102306 ~ 36149276 (-)
G27173 NA non-coding upstream 626654 36362471 ~ 36364455 (-)
G27196 NA non-coding upstream 732269 36468086 ~ 36468452 (-)
G26961 LOC101154678 other downstream 848217 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 3901873 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 4375232 31338716 ~ 31342792 (-)
AMCG00007817 NA other downstream 4471375 31192010 ~ 31246649 (-)
AMCG00007768 NA other downstream 6704077 29001049 ~ 29013947 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 267376 36003193 ~ 36010995 (-)
AMCG00007907 NA other upstream 1106658 36842475 ~ 36846583 (-)
AMCG00007929 NA other upstream 1504267 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 1759094 37494911 ~ 37499392 (-)
G27437 NA other upstream 1831800 37567617 ~ 37569284 (-)

Expression


Co-expression Network