AMCG00007881


Basic Information

Item Value
gene id AMCG00007881
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 35860631 ~ 35931488 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007881
ATGCCGGTCTACATTAAGAAAGGCGCGGCGGAGATCCCCGCTCCCTCTGAGCACGGGGGCAGTGAGGACGAGGAGGACAGCTTTCTGAAGGACCCCGAGCAGCTGCGGGATCAACTGCCTCAGCCCTTCCGCATGATTGACAAGCTCTTGAACAAGCTGCTGGACAGGGCCTGGGACAGCATCTCGGAGAGAGAGGCAGCGAGACGTGCTGAGCAGTCGAGCAGGACATCTCCAGTTTTACAAGCAACAGGTGAAATTAAGCTTTCAGGGAGAGCCAACTGCCTTGCAGGATCTGAGGATGGGAATTATGTCTTTGTGGGTTATTCCAGAGGAATTTCTGTTATCAGCGCTTCCACTTACTCCACTGTCTCAACGTgggaggaggagaatgtggaaaTTACCTCTCTTTGTGCCATCTGCCTCGGAGGGACCATTTATCTCCTGGCCACAGTGGATGATATGGGTGTGTCACGACTATTCGCTTATTTTCCCAACTGCATCCTATTGATCAAAGTAATCAATGAAATTGATGATGTAAGTCGAAGGACCATCTGCACCAAATTTGAACTGTCCAAAAGTGGTGATTTTGCAGGTGTAATGTTAGAAGGCAACAGAGACTCTTGGCTAGAAGTCTATCAGTTTCCAAAAGATTCCTGGCTGAGGGAGCTGGAGCTTGAGCAGACTTCATCGCAAAAACAGGTTTCTGGAGATTTCAAGCTTTCTCCTTTTGGGATGATCATGAAAATCAAGCCACCAAAACTCCTGTCTGGCACATGTGTGAAAAGCCCATTTGAGGTTTTACAGAAGACTGGGGATGGTGTTGTCATTGGTTCTGGTCAAAATCACATGATAAGCTCGCAGCAGTGGGACAAACAAGAGGCAATATTTGCATCTGTGTACAAAAAATATCTGGATGCGTCTGAACCCAAGAAAGCCGAAGAAAAAACAAGgCAAGCTACTTTCCACTTCCTCCTGCCTGGAGGATTATCTCCGCTTTTTGGGGTAACAACAGGTGTGCCCATTGCTATCAGTGTGTGGTGGAGTGGAGATCATAATCTCTTTAAATATCTTCTACAAAGACCTGCAAAAGACAAACCAGGACTTCCTTTATCGGTCTTCGCAGTTCCAGGGGACAGTGACTTCAGCAACATGCTGTTTTTGGAATATCAGCCCATCAAAACAGAGGATGCTTTAATCCGAATGTCTCATTATAATCCCAGAATTCAGCTCCTTGTGAGCTGCAGGGATGGGGCATGTCACCTAGTTACTGGCGGCAGAGGAAAAGTTGCCAGTGTAATAATGGTAACAGAAAGGCCTTCAGATCAGGGATGTATCCCCTCTGCTATGATGGTGGTGCCCTTTCTGTTGAATGTGGTTGTTGTCACCTCTAGAAACGGCACATTTGCCCTCCAGGAGGTCACAGATGGGGCCACACTCTGCACTTTCTCTCTACCGGCTTCACACAGCGCAGCAGCTCCCTGGGATCCAATGGTGTTTTTGGAAGCACAAAACCAGACTCTGTTCGTAGGAGGTGATAGGAAAATGCCTCCTGATGAAATGTTGCAAAGAAGCAAAGCAGACAGTTCGCTCTTCATTTTCGACTTTCATCAGTCTCCATTAATTCAGCCTCACAAAGAAGCTCTCAAGAGTGCCTGGGCTCCCAAACACCCTGCATCTTTGGAAGAGAAATGTGAGCTATTTTTGCAAGCAAGGTTGCGGAGTCTGGAGGACAGAAACAGAGTCATGCAAGAGAACTGGACTCTGCTGCAGCAACACGCCACCTCCCTGTGCCACAAACAGACAAGCCGGGCAGCTGTCCAAAAGGCCCAGGGAATGCATGGCACAGTCGGAGCTCTGCTGCTCCACACTACCCCGCAGAACGTGGTCAAAACAGAACTCGCCTGCCCGTCCACCCCCAGAGCCGGGAATCTCTTCATGCGGAAGGAGGAGGCCGAGCAGCGAAAGGAGCCGGTCATGGTGGAGTTGTTCTCTGACTCTGCCAGCACAGTGGCACTGTGGCAGTAA

Function

GO: NA

KEGG:

id description
K24762 WDR93; WD repeat-containing protein 93

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007881 True 2025 mRNA 0.49 16 35860631 35931488

Neighbor

gene id symbol gene type direction distance location
AMCG00007878 si:dkeyp-59c12.1,LOC106561194,LOC108431221,LOC107690407,LOC107549016,LOC107715600,LOC107693031 coding upstream 45564 35811726 ~ 35815067 (+)
AMCG00007872 LOC106561144,LOC106573775 coding upstream 311724 35537561 ~ 35548907 (+)
AMCG00007871 NA coding upstream 536741 35320619 ~ 35323890 (+)
AMCG00007870 NA coding upstream 631907 35222464 ~ 35228724 (+)
AMCG00007867 NA coding upstream 1506997 34348487 ~ 34353634 (+)
AMCG00007884 NA coding downstream 86199 36017687 ~ 36019684 (+)
AMCG00007888 NA coding downstream 353495 36284983 ~ 36294189 (+)
AMCG00007892 NA coding downstream 473180 36404668 ~ 36425781 (+)
AMCG00007896 NA coding downstream 553498 36484986 ~ 36489446 (+)
AMCG00007895 NA coding downstream 595877 36527365 ~ 36534128 (+)
G27052 NA non-coding upstream 17789 35807368 ~ 35842842 (+)
G27025 NA non-coding upstream 251994 35608423 ~ 35608637 (+)
G27021 NA non-coding upstream 257449 35595413 ~ 35603182 (+)
G26998 NA non-coding upstream 301072 35556145 ~ 35559559 (+)
G26993 NA non-coding upstream 308128 35550842 ~ 35552503 (+)
G27089 NA non-coding downstream 55813 35987301 ~ 36000934 (+)
G27108 NA non-coding downstream 97970 36029458 ~ 36030333 (+)
G27111 NA non-coding downstream 170808 36102296 ~ 36182722 (+)
G27139 NA non-coding downstream 374486 36305974 ~ 36306877 (+)
G27154 NA non-coding downstream 397932 36329420 ~ 36390820 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other upstream 239830 35610982 ~ 35620801 (+)
AMCG00007854 NA other upstream 2065690 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 4420253 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 6041079 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 6135897 29622311 ~ 29724734 (+)
AMCG00007889 NA other downstream 364730 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 1272382 37203870 ~ 37216558 (+)
G27518 NA other downstream 2213496 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 2237082 38168570 ~ 38170146 (+)
AMCG00007957 raly other downstream 2424441 38355929 ~ 38423155 (+)

Expression


Co-expression Network