AMCG00007885


Basic Information

Item Value
gene id AMCG00007885
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36122270 ~ 36142643 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007885
ATGATAGCAGAGTCACATTTCAGTGGCCTGCAGGACACAAGTAGAGCTCTCAGCTTGGATGAGGCAGTCCTCCAGGTCCCTCAGAGGATAGAGCCCCAGCAGGACACGGCTGAGAGGGAGCCGGATGCGTCTGGTACCTGGGGGGCCTGGGGGCCATGGGCCGCATGTTCACGCTCCTGTGGAGGAGGGGTGAGGGCACAGACACGGCCCTGTCTGCCAGCCTACAACCCCCCTGCAGGAGGGTACCTTCACAGAGTGCAGCCCCAGCCGCTCCCCCCCGGCCGCGTAGTGTCGGCCCTGAGGCCCTCTGTGCCACTGCACCGTGACAGTAGCCGTCCACACCGCTCCAACGGCAGCCTGCCCCAGGGCACGGGCGAGCTGAGGGCGGGCAGGGCACAGGCTTCAAGGTTTGGCCGCAGAGGGAATACTGATAAACGGATAACTCCAGGAAACTTTGGGTATGGAAAGGTTCCTTACATTGTACCTCTGCAGACTGACACTGGACAGGAGTCAATCCCTGCCCCCCGTGCCCGCCGACAGCGCCAAGCCTCCCAGGTGTACGGCCGTAGGAGAGGGCAGGGCCAGGGCCAGGGTCAGGGCCAGAGCTACAGACAGCAAAACCTGCACCACAACTATGACACTGGACATAACTTCTACCATGGGCCTCAGGTCAGGACTCACCCGGGCAGGACGTCCATTTACCAGCCAACTCAGAGCATCTATCCTGACAGTGAGCCATCTGTCCACCTTCCTCCTCCGGTCAGACCTCCCAGCCTTGGGGCCGCCTCCATATCATGTGTGGGCGCCCACAAGCAGTACAAGATATGTAACACAAATGTCTGTCCCTCAACCAGCCGTAATATCCGTGAAGTACAGTGTGCTTCGTACAACAACCAACCCTTCATGGGCAGACTCTACGAATGGGAGCCGTTCACTGAGGTGCGGGGGGACCAGCGCTGTGAGCTGAATTGCCGGGCAATTGGCTACCGCTTCTACGTGCGACAGGCAGACACAGTCATCGATGGGACACCATGTGACCACAATGACACCTTCATCTGCGTGGCTGGCCAGTGCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007885 True 1077 mRNA 0.60 5 36122270 36142643

Neighbor

gene id symbol gene type direction distance location
AMCG00007886 NA coding downstream 61617 36038446 ~ 36060653 (-)
AMCG00007882 NA coding downstream 180841 35931242 ~ 35941429 (-)
AMCG00007879 NA coding downstream 262985 35855888 ~ 35859285 (-)
AMCG00007880 NA coding downstream 269505 35840153 ~ 35852765 (-)
AMCG00007877 LOC105016671,LOC103369184,LOC102786692,LOC101476567,LOC102297530,LOC100700148,LOC106588105 coding downstream 386453 35718024 ~ 35735817 (-)
AMCG00007887 NA coding upstream 37266 36179909 ~ 36267806 (-)
AMCG00007891 NA coding upstream 161763 36304406 ~ 36306372 (-)
AMCG00007890 LOC108439026 coding upstream 164921 36307564 ~ 36314143 (-)
AMCG00007893 NA coding upstream 288504 36431147 ~ 36465435 (-)
AMCG00007901 LOC107712968 coding upstream 587678 36730321 ~ 36743469 (-)
G27109 NA non-coding downstream 91958 36029469 ~ 36030312 (-)
G27107 NA non-coding downstream 95287 36026723 ~ 36026983 (-)
G27023 NA non-coding downstream 519095 35595430 ~ 35603175 (-)
G26997 NA non-coding downstream 569763 35550871 ~ 35552507 (-)
G26995 NA non-coding downstream 584634 35537304 ~ 35537636 (-)
G27173 NA non-coding upstream 219828 36362471 ~ 36364455 (-)
G27196 NA non-coding upstream 325443 36468086 ~ 36468452 (-)
G27197 NA non-coding upstream 348553 36491196 ~ 36491846 (-)
G27243 NA non-coding upstream 601425 36744068 ~ 36745866 (-)
G27252 NA non-coding upstream 617702 36760345 ~ 36760589 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other downstream 111275 36003193 ~ 36010995 (-)
G26961 LOC101154678 other downstream 1252463 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 4306119 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 4779478 31338716 ~ 31342792 (-)
AMCG00007817 NA other downstream 4875621 31192010 ~ 31246649 (-)
AMCG00007907 NA other upstream 699832 36842475 ~ 36846583 (-)
AMCG00007929 NA other upstream 1097441 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 1352268 37494911 ~ 37499392 (-)
G27437 NA other upstream 1424974 37567617 ~ 37569284 (-)
G27439 NA other upstream 1428314 37570957 ~ 37571488 (-)

Expression


Co-expression Network