AMCG00007892


Basic Information

Item Value
gene id AMCG00007892
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36404668 ~ 36425781 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007892
ATGCCTTACTGGGATGCAGAGTACCCTGGGCAGCCACTGTGGCAGTCAGTCTTGCTCTTCTGCTGCAAGGGCATGATAGAGGGCATCATTGTCCTCCTCTTCATCTGGCTGCTCATTCAGGTTCTACTCAACAAACATCTAGAAGTGCACTTACAGGTCCTGCTGGGCGTCGGTCTAGCTGTCTTCTGCTTTTGCCTCATCCTTGGATGCATCATCTGTTGGCGGCGCAGGAAGTCCCACTCCGAAGAAGAAAAAGCTTCTCCACCCACCACTGAGCAAGTGGTACTGGACTTGAGTGCCAACCTCTCTCCCTGCTCCAGCGCCGCAGCGAGCACCACTCCCATCAAGCAACAGTATGAGGAGCTGGAGGGTGATGTCTTGGACTATCCATTCCCGTCCGCCTATAGCTGCTCGGCGCCATCGGAGCAAGACTTCGGTGTGCCGCCTCCCAGCCCGCGCCCCAGATCCTCTTCAGAGCTTGGGTCTAGATTCCCATTACAGCAGCTAAGCAGCCCCTCTAATGAGCCCAGCCCCCCTTACCAGCCCTGTCTCCATGGCAGGGCCTCCCTACCATCCATCCCCAAGCTCAGCCTGGTCTCTAAGACCAAACGGGCCCTGGAGAGGCGCTGCACTGTCACGGGGGATGGATTCATCTACAGCGAGCGCTCTAAGCTCACCGGTTCGGGCACCCGGCTATTCCCCCCCCAAAATGTCCGTCAGTCCCGCACCCTCCCCGAGGAGCTGTCTGAGATGAGCCCCAAGCCACCCCCCTGCCTCCACTTCAGCCTGCTGTACTCGCCAGCACAGGGCACCCTCACAGTGACGGTGATCAGCCTGGTCAGCGCCCGCCGCAAGTTGGGGGGGGTCTATGTGCGCCTCAGTCTGCTGCCCCACTGCCCTAACCGCCAGCAGACCTCGGTGCGCCGCCGAAGCCTGAGCCCCGAATTCCGTGAGAACTTCCTGTTCGAAGTGGGCTCGGTGGAAGAGCTGAAAGAGTGCTGTCTCCACCTGAATGTCTTCGCCAAGGACTTCCCCAGCCTGCGGGACACTCATCTGGGGGAGGTGATGCTGGCTTGTAGAGAGGTAGAGTGGGAGTCCAACATGCCCATGACCTTCAACCGGGAACTTGTTCTCTCCAAAGGCAAACTGAAAAAGAGTCAGAGTTCCCAGGAAGCATACAACAGGCGGACCTCCATGTCCAGCGCCAGGCCCCTCGGCCAGCTCTTTATCCTGCTGCAGTACCAAACGCTGGCGCACAGGATCAAAGTGATGGTCCGCAAGGCCGAGAACCTGGAAACAAAGATGGCGAGTGGGTGCAACGCGGTGTGGAACGCCCCATTCCTCTTCGACATGCCCCCTGGGGAGATCCAGCAGCTGCCCGTCTCTCTGGAATTCATTGTCATGCAGGGGCGAATCTACACAAAAAGCAGCATTCTGGGCCGTGTGCTGATTGGCCATGACGCTCCAGAAGCAGGACAAGGCCACTGGAAAGATATGTGCTGTAGGGGGCAGGTGGAGTCAGCCCGCTGGCACGCCATCCAACCCGACTGTCTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007892 True 1557 mRNA 0.59 5 36404668 36425781

Neighbor

gene id symbol gene type direction distance location
AMCG00007888 NA coding upstream 110479 36284983 ~ 36294189 (+)
AMCG00007884 NA coding upstream 384984 36017687 ~ 36019684 (+)
AMCG00007881 NA coding upstream 473180 35860631 ~ 35931488 (+)
AMCG00007878 si:dkeyp-59c12.1,LOC106561194,LOC108431221,LOC107690407,LOC107549016,LOC107715600,LOC107693031 coding upstream 589601 35811726 ~ 35815067 (+)
AMCG00007872 LOC106561144,LOC106573775 coding upstream 855761 35537561 ~ 35548907 (+)
AMCG00007896 NA coding downstream 59205 36484986 ~ 36489446 (+)
AMCG00007895 NA coding downstream 101584 36527365 ~ 36534128 (+)
AMCG00007894 LOC106562351,LOC107554933 coding downstream 114802 36540583 ~ 36569423 (+)
AMCG00007897 csk,LOC107089925,LOC108264088,LOC103138042 coding downstream 197272 36623053 ~ 36644439 (+)
AMCG00007898 csk,LOC107089925,LOC106573028 coding downstream 219128 36644909 ~ 36646509 (+)
G27154 NA non-coding upstream 13848 36329420 ~ 36390820 (+)
G27139 NA non-coding upstream 97791 36305974 ~ 36306877 (+)
G27111 NA non-coding upstream 221946 36102296 ~ 36182722 (+)
G27108 NA non-coding upstream 374335 36029458 ~ 36030333 (+)
G27089 NA non-coding upstream 403734 35987301 ~ 36000934 (+)
G27187 NA non-coding downstream 3625 36429406 ~ 36429931 (+)
G27216 NA non-coding downstream 259529 36685310 ~ 36727117 (+)
G27253 NA non-coding downstream 341872 36767653 ~ 36767939 (+)
G27263 NA non-coding downstream 418200 36843981 ~ 36845524 (+)
G27300 NA non-coding downstream 530401 36956182 ~ 36956454 (+)
AMCG00007889 NA other upstream 101827 36296218 ~ 36302841 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other upstream 783867 35610982 ~ 35620801 (+)
AMCG00007854 NA other upstream 2609727 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 4964290 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 6585116 29755040 ~ 29819552 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 778089 37203870 ~ 37216558 (+)
G27518 NA other downstream 1719203 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 1742789 38168570 ~ 38170146 (+)
AMCG00007957 raly other downstream 1930148 38355929 ~ 38423155 (+)
G27551 NA other downstream 2006264 38432045 ~ 38436595 (+)

Expression


Co-expression Network