AMCG00007893


Basic Information

Item Value
gene id AMCG00007893
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36431147 ~ 36465435 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007893
CGTGGACACCAGTGAAACCAGTGATGAATTACCTTGGAGCGACGGAGCAGCCCGAGGCCTGATGACGCGCCGGCGAGGCGAGGCTGCTGCTGTTCACAGTTCCTGTGGGAGTGAGGGGGGTGTGGATGATTTAGACAACCCTGGGCCAAAGAGATGGCACTCCCTCTCTCGTCTGGCCCCTGAGGGGGCTCCTCGTCCCCTCTCACCCCCTGGGCCTGAGCTGCGGACAGCCCTGGCGGAGAGCGGGGCGCGGAGGGCTGAGCTGGTCAGGCAGCTGAGGGAGGCTCACAGCCGGCTGGAAGAGCAGACCGAGCACCTCCGCTCGCGAGACAGCCAGCTGGAGGCCAGCCAGGCCGGGACAGAGCTGCTGAACCTCAAACACAAGCAACTGGCTCTGGCAGTCAGTGCCCTGGAAGAGGAGAAGGCGACAGCAGAGCTGTGTCGTTTCGAGGAGAGTCGGCGCCGTGGGGAACTCCAGGACAAggtCCTGCAGCTGGAGTTTGACATGCTGAAGATGAGGTCTATGCTGGAGAGAGGCAGCACAAGGCCCATACCGACTCACAGCCAAGGGCACAACACTGTCACCCGCACCCCTCTGAGCAGCACTTTGCCCAGGACACACGAAGACTTCTATAAACAGGGTCAGCTAGCCGTCCTGAGCCAAACCAATGAGACCAACCAGAGGCTAACCGACTCTATCAGGGCTCAGAGTGACCTGCAGGACGAGCTGAATGATCTTCGCAGCCACCTCAGCCAGGCCACGCTGGAAAAGGACCTCCTGTCTTCCAAAGAGAAGGCAGGGCTGAACCAGCGTGTCCagagcctggagctggagctggagcgcGCTCAGAGGGGCCGCGAGGGCTTCACGGACCAGGTGTCGGAGCTGCACATGGAACTGGTGGGGGTCAAGACCCAGGCCAACAGACAGGACCAGGAGAAAGTGCTCATGAAGGAGGAGCTGCTCACTGTCAAACAGGTGAACCAGAGACTGTCCTCAGACCTGGCTGACCTGAAGCAGAAGCTGGAAACAGCCCTCAGGCAGCTGCATGAGCTGGAGGCAGAGAAGATGATCCACACCAATCAGATCGCAGCTCTGGAGACCGAGCGCTCACAGCTGATTGGAGAGAGGGAAGTGCTGATGCGTGGTCAGGGGCTGGGGAGCCAGGAGGAGCTTCAGGAGCTCAGAGAGACCTGCCAAGCCCTGAGgGATTCCCAGAATGCCCTGCAATCAGGCAATGAAGAACTGCAGAGTCGATGCCAGATGCTGGAGGCGGGGCTTCGAGCTAAGGAAGTGGATCTACAACAGAAAGAGGAGGAGCaggcagagagggaggcaggaTTAGTGCGCCAGAAGGAGGAGATGCAGAGAGTGGTGGCACACTGGAAGGAGAGATGGCAGGGGGCAGCAGTGGCACTACGGTCCAGAGAGGAGGAGTTGGAGGAGGCGCGGGGGCGCTTGCAGGAGCCTTCGGACACGtccTGGCAGAAAGAAGAGGCATTAGAGCTGGGACAGGAACTGGAGAGACTTCAGAGAATAGTGCAGAGTAACCAGGAGGAAATCCAAAGGCTTGTGCAGCAGAGAGACAATGCAGAAGCCGAACTGAAGAGAATCAAGGGAAAACTGACCAGCCAGCCAGAGAAGCTGCATGAGAAACACAACAGGTCTCAAAGtgaaaGAGGTTCTGCTTCATTGGAGGGAAACGAGCAGCTGAGAAATCATGaaACCCAATGGATGGATTTGCCAAAACAGGACAAAGGCACGATTACAGAgTCTTTGGGTCTCTCACTGGAGGAGCTGAAGGCTGAAGTCTCCGACCTTCAGAAGCAGTTAGAAGATTCAAACTCCACGCACCAGAAACAGCAGGATATCATACAATCCCAGACTGCGgagcTGAAGGAGCTGAAATCAAAGCAGTCGGGAGACATCAAGGCCTCTCTGGAGGAAGTGGACGGCGACCTGCTGCAGATGAGGGCAGAGCTCCAGAAGGTGTGGGATGTCCTGAAGACCAGAGACTCTGAGCTGGAAGAGCAGCACCAGGAACTGGAGTCAACACGAGGACAGGTGTCTGAGTGCAGCAGTGAGATGAGGAGGTTGGAGAAAGAGCTGGCAGAGCAGGCACAGGAGCTGGCAAAGAAGGATCAAGCTCTGAGGCGGCtagagagactgagggagacagagaaaacTGAGATGGAGATAAAACTTTCCTCTCTTGAACTAAAGGTGCTGGCAGAGCagagggagctggaggagggACAAACCTACAGGAGTGACAGCACTAAGTGTTCCCGCTGTGCAGCCCTAGAAGAACCAGTGGCACGGCTGGAAGAGTGCCAGAGGAGGTGTGTTCAGCTGCAACAGGAGAAAGACCAGGCAGTGCAGGATCTGCAGGAGACCCAACAGGGTCCAGCAAAGATAAAGGGTCCCGGGATAAAAAAAGAGATTCGTCCAGAGAACACGGACCATGAGAGACAAAGGAAGCTAGTGACTGAGCAGTTGAAGAGTCTATTTAAAGAGCGAGAGCAGCTGGGCAAGGCCTATGACAAGCTACCTGGAGCTCGGAGAGGAGAGAGCTCACTGCAGGAGTGGGCTCCTAAATCACAGGTCATCAAGAATGCACTGGACACGCTCAGCAGTCAGGAGAGGAGTCGGTGGGGGctggaggtggagagagagcgTCTGCAGGGGGCACCAGAGTACAGGGAGTTTCAGGGGCTCCAGGAGCAGGTGAACAGGCTCAGAGAGGAGCTGCGCTGCAAAACGGACAAGATGACTTCCATGAACACCGAAATGGAAAAccttaaagaaagaaatgaaaatctCCTGAAAGccaAGCTGAGGTTCCAGCAGCAGATCCAGGGCCTGCGTGCATCTGGACCACAAACCAGAGAGAAGGGATCAGGGCAGGAAGTGCCCCACCTGTCCCAGGCAACTGGGGAGGGAGGCCTCCTGGGCAGGGGTGTCTCTGCATCCCCTAGCAACGACGGGACCTTCCTGGCCAGGCAGGTGGAGGTGCTCGATGTCCccggagaggaggcagaggagcaCGGGCCTATTGGGGACTCCTGGAGCTCaggaccccccaccccactgtcTTCTGTCACCCTATCCCAAACTTCAAACATCCTCAACCTTCCCACCAGCCAGAAGCACTTCAAGCTCTCCCCTGACCTTTCACCCCTGACACCCCGAAGCTGGGCAGGTTCCCAAGAGTCCCTGACAGACAAGAGCCCCCTACTGCTGTCCCCGCAGCCCTACCGTGCACAGACCCCCAAGAATAGCTTCAGGTTTGGGAAGAAATAGGGAAGCCCACCACAAGTGAAATGCACCTCACCTAGACATTATCCTGCTTCTGTGGTCTGTAACTTGAATGTGAACCAAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007893 True 3384 mRNA 0.57 26 36431147 36465435

Neighbor

gene id symbol gene type direction distance location
AMCG00007890 LOC108439026 coding downstream 117004 36307564 ~ 36314143 (-)
AMCG00007891 NA coding downstream 124775 36304406 ~ 36306372 (-)
AMCG00007887 NA coding downstream 163341 36179909 ~ 36267806 (-)
AMCG00007885 NA coding downstream 288504 36122270 ~ 36142643 (-)
AMCG00007886 NA coding downstream 370494 36038446 ~ 36060653 (-)
AMCG00007901 LOC107712968 coding upstream 264886 36730321 ~ 36743469 (-)
AMCG00007908 NA coding upstream 404696 36870131 ~ 36879680 (-)
AMCG00007911 LOC103464266,LOC105008435,LOC107595422,LOC107087943,LOC107666149,LOC108272058 coding upstream 419945 36885380 ~ 36900670 (-)
AMCG00007910 gdf5 coding upstream 471392 36936827 ~ 36941868 (-)
AMCG00007915 NA coding upstream 523228 36988663 ~ 36992974 (-)
G27173 NA non-coding downstream 66692 36362471 ~ 36364455 (-)
G27123 NA non-coding downstream 281871 36102306 ~ 36149276 (-)
G27109 NA non-coding downstream 400835 36029469 ~ 36030312 (-)
G27107 NA non-coding downstream 404164 36026723 ~ 36026983 (-)
G27023 NA non-coding downstream 827972 35595430 ~ 35603175 (-)
G27196 NA non-coding upstream 2651 36468086 ~ 36468452 (-)
G27197 NA non-coding upstream 25761 36491196 ~ 36491846 (-)
G27243 NA non-coding upstream 278633 36744068 ~ 36745866 (-)
G27252 NA non-coding upstream 294910 36760345 ~ 36760589 (-)
G27254 NA non-coding upstream 302218 36767653 ~ 36767939 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other downstream 420152 36003193 ~ 36010995 (-)
G26961 LOC101154678 other downstream 1561340 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 4614996 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 5088355 31338716 ~ 31342792 (-)
AMCG00007817 NA other downstream 5184498 31192010 ~ 31246649 (-)
AMCG00007907 NA other upstream 377040 36842475 ~ 36846583 (-)
AMCG00007929 NA other upstream 774649 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 1029476 37494911 ~ 37499392 (-)
G27437 NA other upstream 1102182 37567617 ~ 37569284 (-)
G27439 NA other upstream 1105522 37570957 ~ 37571488 (-)

Expression


Co-expression Network